Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 3.5e-70 268.1 126 100.0
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 1.6e-46 189.5 102 82.4
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 6.0e-46 187.6 121 73.6
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 6.0e-46 187.6 107 77.6
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.3e-45 186.4 121 71.9
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 2.5e-44 182.2 99 81.8
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 3.3e-44 181.8 126 67.5
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 3.3e-44 181.8 114 71.1
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 4.3e-44 181.4 115 73.9
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 1.2e-43 179.9 113 69.9
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 1.6e-43 179.5 98 81.6
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 1.6e-43 179.5 127 69.3
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 2.8e-43 178.7 121 68.6
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 2.8e-43 178.7 100 80.0
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 3.6e-43 178.3 93 84.9
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 6.2e-43 177.6 122 71.3
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 8.1e-43 177.2 134 67.9
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 8.1e-43 177.2 97 81.4
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 8.1e-43 177.2 94 83.0
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 8.1e-43 177.2 120 68.3
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 8.1e-43 177.2 114 71.1
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 1.1e-42 176.8 118 69.5
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 1.4e-42 176.4 91 81.3
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 1.4e-42 176.4 107 75.7
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 1.8e-42 176.0 107 74.8
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 1.8e-42 176.0 112 70.5
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 2.3e-42 175.6 116 68.1
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 4.0e-42 174.9 107 73.8
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 4.0e-42 174.9 90 84.4
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 5.2e-42 174.5 127 66.9
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 5.2e-42 174.5 102 77.5
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 5.2e-42 174.5 102 77.5
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 5.2e-42 174.5 91 81.3
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 6.8e-42 174.1 124 66.9
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 6.8e-42 174.1 123 66.7
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 8.9e-42 173.7 91 83.5
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 1.2e-41 173.3 125 66.4
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 1.2e-41 173.3 95 80.0
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 1.2e-41 173.3 107 72.9
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 1.2e-41 173.3 107 72.9
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 2.0e-41 172.6 112 74.1
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 2.0e-41 172.6 90 84.4
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 2.0e-41 172.6 102 76.5
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 2.6e-41 172.2 101 77.2
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 3.4e-41 171.8 107 72.0
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 4.4e-41 171.4 112 67.9
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 4.4e-41 171.4 113 68.1
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 5.8e-41 171.0 112 67.9
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 5.8e-41 171.0 88 81.8
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 5.8e-41 171.0 112 69.6
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 5.8e-41 171.0 92 81.5
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 5.8e-41 171.0 91 82.4
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 7.5e-41 170.6 115 67.8
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 9.8e-41 170.2 81 88.9
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 1.3e-40 169.9 103 74.8
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 1.3e-40 169.9 92 77.2
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 1.3e-40 169.9 92 77.2
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 1.3e-40 169.9 92 78.3
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 1.7e-40 169.5 91 82.4
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 1.7e-40 169.5 91 82.4
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 1.7e-40 169.5 91 82.4
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 3.7e-40 168.3 92 79.3
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 1.9e-39 166.0 99 74.7
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 1.9e-39 166.0 121 67.8
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 2.4e-39 165.6 92 77.2
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 5.4e-39 164.5 124 65.3
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 1.2e-38 163.3 92 75.0
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 2.1e-38 162.5 94 77.7
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 2.7e-38 162.2 96 76.0
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 7.8e-38 160.6 136 57.4
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 7.8e-38 160.6 151 55.6
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 1.9e-36 156.0 140 54.3
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 1.9e-36 156.0 83 81.9
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 1.9e-36 156.0 91 74.7
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 2.5e-36 155.6 115 63.5
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 9.5e-36 153.7 81 80.2
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 1.2e-35 153.3 81 79.0
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 2.1e-35 152.5 81 79.0
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 2.8e-35 152.1 179 46.9
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 3.6e-35 151.8 180 46.7
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 8.9e-34 147.1 85 72.9
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 1.5e-33 146.4 112 60.7
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 1.4e-31 139.8 178 43.8
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 7.1e-31 137.5 81 70.4
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 1.6e-30 136.3 125 51.2
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 1.2e-27 126.7 83 62.7
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 6.4e-24 114.4 99 57.6
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 2.4e-23 112.5 51 94.1
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 1.2e-22 110.2 51 90.2
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 1.6e-22 109.8 51 88.2
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 1.6e-22 109.8 52 90.4
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 1.5e-20 103.2 91 57.1
Nn3g18065 Nelumbo nucifera HOM05D007646 ORTHO05D004022 1.0e-13 80.5 41 82.9
MELO3C020311.2 Cucumis melo HOM05D007646 ORTHO05D004022 2.5e-12 75.9 48 70.8
ECA246G1632 Erigeron canadensis HOM05D007646 ORTHO05D004022 7.4e-12 74.3 34 82.4
unitig_748.g8495 Utricularia gibba HOM05D007646 ORTHO05D004022 7.4e-12 74.3 40 77.5
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 1.3e-11 73.6 79 41.8
SMO347G0449 Selaginella moellendorffii HOM05D007710 ORTHO05D004022 9.0e-10 67.4 79 43.0
Pp3c5_4790 Physcomitrium patens HOM05D007710 ORTHO05D004022 1.5e-09 66.6 84 36.9
PGR042G1372 Punica granatum HOM05D007710 ORTHO05D004022 3.4e-09 65.5 83 38.6
ECA233G0318 Erigeron canadensis HOM05D007710 ORTHO05D004022 7.6e-09 64.3 94 35.1
Nitab4.5_0000021g0800 Nicotiana tabacum HOM05D007710 ORTHO05D004022 1.3e-08 63.5 88 37.5
EL10Ac3g05053 Beta vulgaris HOM05D007710 ORTHO05D004022 2.2e-08 62.8 83 37.3
AUR62028202 Chenopodium quinoa HOM05D007710 ORTHO05D004022 2.9e-08 62.4 83 36.1
Lsat_1_v5_gn_2_60801 Lactuca sativa HOM05D007710 ORTHO05D004022 2.9e-08 62.4 81 38.3
Nitab4.5_0004530g0090 Nicotiana tabacum HOM05D007710 ORTHO05D004022 2.9e-08 62.4 88 36.4
Actinidia08760 Actinidia chinensis HOM05D007710 ORTHO05D004022 3.8e-08 62.0 84 35.7
AT1G65000 Arabidopsis thaliana HOM05D007710 ORTHO05D004022 4.9e-08 61.6 84 36.9
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 4.9e-08 61.6 88 36.4
Cc02_g00160 Coffea canephora HOM05D007710 ORTHO05D004022 4.9e-08 61.6 83 34.9
TWI32G0404 Tripterygium wilfordii HOM05D007710 ORTHO05D004022 4.9e-08 61.6 83 37.3
BcaB03g15335 Brassica carinata HOM05D007710 ORTHO05D004022 6.4e-08 61.2 84 35.7
CiPaw.06G035400 Carya illinoinensis HOM05D007710 ORTHO05D004022 6.4e-08 61.2 88 35.2
Glyma.12G016700 Glycine max HOM05D007710 ORTHO05D004022 6.4e-08 61.2 83 37.3
unitig_747.g21335 Utricularia gibba HOM05D007710 ORTHO05D004022 6.4e-08 61.2 126 31.0
TAR375G0377 Trochodendron aralioides HOM05D007710 ORTHO05D004022 8.4e-08 60.8 80 37.5
Aqoxy3G02299 Aquilegia oxysepala HOM05D007710 ORTHO05D004022 1.1e-07 60.5 80 36.2
BraA07t30900Z Brassica rapa HOM05D007710 ORTHO05D004022 1.1e-07 60.5 84 35.7
Cre13.g605700 Chlamydomonas reinhardtii HOM05D007646 ORTHO05D004022 1.1e-07 60.5 112 30.4
Haze_00383 Corylus avellana HOM05D007710 ORTHO05D004022 1.1e-07 60.5 88 35.2
DCAR_009023 Daucus carota HOM05D007710 ORTHO05D004022 1.1e-07 60.5 83 36.1
Sp5g19360 Schrenkiella parvula HOM05D007710 ORTHO05D004022 1.1e-07 60.5 84 35.7
arahy.Tifrunner.gnm1.ann1.GY8AT6 Arachis hypogaea HOM05D007710 ORTHO05D004022 1.4e-07 60.1 90 34.4
arahy.Tifrunner.gnm1.ann1.U0IDC3 Arachis hypogaea HOM05D007710 ORTHO05D004022 1.4e-07 60.1 90 34.4
A07p32740 Brassica napus HOM05D007710 ORTHO05D004022 1.4e-07 60.1 84 35.7
Prupe.2G328300 Prunus persica HOM05D007710 ORTHO05D004022 1.4e-07 60.1 83 34.9
Hund09805 Selenicereus undatus HOM05D007710 ORTHO05D004022 1.4e-07 60.1 99 33.3
Duzib128G0150 Durio zibethinus HOM05D007710 ORTHO05D004022 1.9e-07 59.7 86 36.0
Phvul.011G019000 Phaseolus vulgaris HOM05D007710 ORTHO05D004022 1.9e-07 59.7 83 36.1
BolC6t38987H Brassica oleracea HOM05D007710 ORTHO05D004022 2.4e-07 59.3 83 33.7
CSS0005120 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 2.4e-07 59.3 83 34.9
CSS0038916 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 2.4e-07 59.3 83 34.9
AL2G19620 Arabidopsis lyrata HOM05D007710 ORTHO05D004022 3.2e-07 58.9 91 33.0
FvH4_7g34150 Fragaria vesca HOM05D007710 ORTHO05D004022 3.2e-07 58.9 83 34.9
Hma1.2p1_0649F.1_g195220 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 3.2e-07 58.9 77 35.1
Lj3g0011322 Lotus japonicus HOM05D007710 ORTHO05D004022 4.2e-07 58.5 83 37.3
Aa31LG2G2200 Aethionema arabicum HOM05D007710 ORTHO05D004022 5.5e-07 58.2 83 33.7
CARHR056450 Cardamine hirsuta HOM05D007710 ORTHO05D004022 5.5e-07 58.2 83 33.7
PSO063G4155 Papaver somniferum HOM05D007710 ORTHO05D004022 5.5e-07 58.2 80 36.2
RcHm_v2.0_Chr1g0384511 Rosa chinensis HOM05D007710 ORTHO05D004022 5.5e-07 58.2 88 34.1
PGSC0003DMG400003164 Solanum tuberosum HOM05D007710 ORTHO05D004022 5.5e-07 58.2 83 36.1
PGSC0003DMG402026486 Solanum tuberosum HOM05D007710 ORTHO05D004022 5.5e-07 58.2 83 36.1
TPR.G19627 Trifolium pratense HOM05D007710 ORTHO05D004022 5.5e-07 58.2 91 33.0
PSO782G0287 Papaver somniferum HOM05D007710 ORTHO05D004022 7.1e-07 57.8 80 35.0
CAN.G1131.30 Capsicum annuum HOM05D007710 ORTHO05D004022 9.3e-07 57.4 83 34.9
Gohir.A13G101700 Gossypium hirsutum HOM05D007710 ORTHO05D004022 9.3e-07 57.4 86 34.9
Potri.013G078866 Populus trichocarpa HOM05D007710 ORTHO05D004022 9.3e-07 57.4 84 38.1
THA.LOC104805715 Tarenaya hassleriana HOM05D007710 ORTHO05D004022 9.3e-07 57.4 83 34.9
GSVIVG01024345001 Vitis vinifera HOM05D007710 ORTHO05D004022 9.3e-07 57.4 83 34.9
ATR0057G097 Amborella trichopoda HOM05D007710 ORTHO05D004022 1.2e-06 57.0 90 35.6
FAN03G2015 Fragaria x ananassa HOM05D007710 ORTHO05D004022 1.2e-06 57.0 79 34.2
C06p38950 Brassica napus HOM05D007710 ORTHO05D004022 1.6e-06 56.6 85 34.1
Solyc03g097200.3 Solanum lycopersicum HOM05D007710 ORTHO05D004022 1.6e-06 56.6 83 34.9
Sopen03g027960 Solanum pennellii HOM05D007710 ORTHO05D004022 1.6e-06 56.6 83 34.9
CARHR057330 Cardamine hirsuta HOM05D007710 ORTHO05D004022 2.1e-06 56.2 83 33.7
Atru.chr12.1914 Acer truncatum HOM05D007710 ORTHO05D004022 3.5e-06 55.5 83 34.9
HanXRQChr04g0105361 Helianthus annuus HOM05D007710 ORTHO05D004022 3.5e-06 55.5 81 35.8
Medtr4g478210 Medicago truncatula HOM05D007710 ORTHO05D004022 3.5e-06 55.5 81 34.6
Peaxi162Scf00516g00641 Petunia axillaris HOM05D007710 ORTHO05D004022 6.0e-06 54.7 83 33.7
Mapoly0120s0048 Marchantia polymorpha HOM05D007710 ORTHO05D004022 7.9e-06 54.3 79 32.9
Nn6g33555 Nelumbo nucifera HOM05D007710 ORTHO05D004022 7.9e-06 54.3 80 32.5


User provided reference genes

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