Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030886001 Vitis vinifera HOM05D006412 ORTHO05D008025 4.5e-217 757.7 393 100.0
Atru.chr1.1777 Acer truncatum HOM05D006412 ORTHO05D008025 9.2e-162 573.9 364 79.1
RcHm_v2.0_Chr3g0493551 Rosa chinensis HOM05D006412 ORTHO05D008025 2.1e-161 572.8 362 79.8
RcHm_v2.0_Chr3g0491591 Rosa chinensis HOM05D006412 ORTHO05D008025 4.6e-161 571.6 362 79.6
Cfa007858 Carpinus fangiana HOM05D006412 ORTHO05D008025 7.8e-161 570.9 364 79.7
MD09G1260600 Malus domestica HOM05D006412 ORTHO05D008025 2.3e-160 569.3 363 78.5
Prupe.3G152400 Prunus persica HOM05D006412 ORTHO05D008025 1.1e-159 567.0 364 77.5
Sabra17G0104300 Salix brachista HOM05D006412 ORTHO05D008025 1.5e-156 556.6 364 78.6
Cpa.g.sc116.15 Carica papaya HOM05D006412 ORTHO05D008025 2.6e-156 555.8 362 77.3
FvH4_2g04020 Fragaria vesca HOM05D006412 ORTHO05D008025 2.6e-156 555.8 361 77.3
FAN24G3364 Fragaria x ananassa HOM05D006412 ORTHO05D008025 2.6e-156 555.8 361 77.3
Sabra17G0101600 Salix brachista HOM05D006412 ORTHO05D008025 3.8e-155 552.0 364 78.3
FAN15G2201 Fragaria x ananassa HOM05D006412 ORTHO05D008025 2.1e-153 546.2 362 75.7
TWI74G1556 Tripterygium wilfordii HOM05D006412 ORTHO05D008025 6.0e-153 544.7 364 75.3
Gorai.001G085900 Gossypium raimondii HOM05D006412 ORTHO05D008025 5.1e-152 541.6 332 82.2
Gohir.D07G080800 Gossypium hirsutum HOM05D006412 ORTHO05D008025 1.9e-151 539.7 330 82.4
Solyc02g091290.3 Solanum lycopersicum HOM05D006412 ORTHO05D008025 7.3e-151 537.7 364 74.2
Manes.01G114900 Manihot esculenta HOM05D006412 ORTHO05D008025 1.2e-150 537.0 375 74.9
SalBow3G1843 Salvia bowleyana HOM05D006412 ORTHO05D008025 1.6e-150 536.6 364 76.1
Nn3g18189 Nelumbo nucifera HOM05D006412 ORTHO05D008025 1.4e-149 533.5 365 72.6
THA.LOC104822436 Tarenaya hassleriana HOM05D006412 ORTHO05D008025 2.4e-149 532.7 364 75.0
PSO384G0683 Papaver somniferum HOM05D006412 ORTHO05D008025 5.2e-149 531.6 364 72.3
PGSC0003DMG400030600 Solanum tuberosum HOM05D006412 ORTHO05D008025 5.2e-149 531.6 359 74.4
PSO339G1787 Papaver somniferum HOM05D006412 ORTHO05D008025 6.9e-149 531.2 364 72.0
Sopen02g035910 Solanum pennellii HOM05D006412 ORTHO05D008025 1.5e-148 530.0 363 73.6
Aa31LG2G3160 Aethionema arabicum HOM05D006412 ORTHO05D008025 3.4e-148 528.9 364 72.8
BraA07t30973Z Brassica rapa HOM05D006412 ORTHO05D008025 3.4e-148 528.9 364 72.5
AL2G22970 Arabidopsis lyrata HOM05D006412 ORTHO05D008025 4.4e-148 528.5 360 74.4
AT1G66520 Arabidopsis thaliana HOM05D006412 ORTHO05D008025 5.8e-148 528.1 360 73.9
BcaB03g15262 Brassica carinata HOM05D006412 ORTHO05D008025 7.6e-148 527.7 364 73.1
MELO3C020307.2 Cucumis melo HOM05D006412 ORTHO05D008025 4.9e-147 525.0 370 71.9
Aqoxy3G04032 Aquilegia oxysepala HOM05D006412 ORTHO05D008025 6.4e-147 524.6 364 70.9
Cc07_g08250 Coffea canephora HOM05D006412 ORTHO05D008025 8.4e-147 524.2 358 72.9
Migut.L00473 Erythranthe guttata HOM05D006412 ORTHO05D008025 1.4e-146 523.5 365 75.1
BcaC08g46048 Brassica carinata HOM05D006412 ORTHO05D008025 1.9e-146 523.1 364 72.0
C06p39860 Brassica napus HOM05D006412 ORTHO05D008025 1.9e-146 523.1 364 72.0
Lj2g0003354 Lotus japonicus HOM05D006412 ORTHO05D008025 3.2e-146 522.3 335 76.7
BolC6t39074H Brassica oleracea HOM05D006412 ORTHO05D008025 4.2e-146 521.9 364 71.7
A07p33470 Brassica napus HOM05D006412 ORTHO05D008025 7.1e-146 521.2 364 72.3
Nitab4.5_0003598g0080 Nicotiana tabacum HOM05D006412 ORTHO05D008025 7.1e-146 521.2 369 72.1
vmacro18058 Vaccinium macrocarpon HOM05D006412 ORTHO05D008025 7.1e-146 521.2 417 66.4
Oeu030807.1 Olea europaea HOM05D006412 ORTHO05D008025 9.3e-146 520.8 383 70.0
Peaxi162Scf00803g00420 Petunia axillaris HOM05D006412 ORTHO05D008025 1.2e-145 520.4 363 73.3
Sed0012276 Sechium edule HOM05D006412 ORTHO05D008025 2.1e-145 519.6 361 75.1
SGA_v2.0_scaffold174G39268 Striga asiatica HOM05D006412 ORTHO05D008025 2.1e-145 519.6 375 70.7
MSTRG.2784 Avicennia marina HOM05D006412 ORTHO05D008025 3.5e-145 518.8 366 71.3
PGR042G1412 Punica granatum HOM05D006412 ORTHO05D008025 3.5e-145 518.8 329 78.1
HanXRQChr09g0262341 Helianthus annuus HOM05D006412 ORTHO05D008025 4.6e-145 518.5 369 72.1
ClCG05G010820 Citrullus lanatus HOM05D006412 ORTHO05D008025 1.0e-144 517.3 385 70.4
CAN.G625.77 Capsicum annuum HOM05D006412 ORTHO05D008025 2.3e-144 516.2 364 72.3
Nitab4.5_0002456g0120 Nicotiana tabacum HOM05D006412 ORTHO05D008025 6.6e-144 514.6 362 72.1
Carub.0002s1254 Capsella rubella HOM05D006412 ORTHO05D008025 1.9e-143 513.1 360 72.8
CANSAT78G1038 Cannabis sativa HOM05D006412 ORTHO05D008025 5.6e-143 511.5 360 71.7
Eucgr.F02693 Eucalyptus grandis HOM05D006412 ORTHO05D008025 5.6e-143 511.5 359 71.0
VMungo0464G0110 Vigna mungo HOM05D006412 ORTHO05D008025 1.3e-142 510.4 362 71.3
AUR62026045 Chenopodium quinoa HOM05D006412 ORTHO05D008025 2.8e-142 509.2 362 73.8
Lsat_1_v5_gn_4_154881 Lactuca sativa HOM05D006412 ORTHO05D008025 2.8e-142 509.2 369 71.5
Sc11g0008580 Simmondsia chinensis HOM05D006412 ORTHO05D008025 2.8e-142 509.2 331 78.5
AL2G24490 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 3.6e-142 508.8 371 70.4
AUR62032836 Chenopodium quinoa HOM05D006412 ORTHO05D008025 3.1e-141 505.8 361 72.6
Sp5g21570 Schrenkiella parvula HOM05D006412 ORTHO05D008025 3.1e-141 505.8 360 72.5
Dinv14869 Davidia involucrata HOM05D006412 ORTHO05D008025 4.5e-140 501.9 365 72.3
Glyma.05G001000 Glycine max HOM05D006412 ORTHO05D008025 1.4e-138 496.9 366 69.9
Medtr6g003980 Medicago truncatula HOM05D006412 ORTHO05D008025 1.9e-138 496.5 331 74.0
ECA232G0076 Erigeron canadensis HOM05D006412 ORTHO05D008025 9.3e-138 494.2 365 69.6
Phvul.004G001300 Phaseolus vulgaris HOM05D006412 ORTHO05D008025 2.1e-137 493.0 332 74.1
Ca_24327_v3 Cicer arietinum L. HOM05D006412 ORTHO05D008025 6.7e-136 488.0 332 73.2
CSS0049075 Camellia sinensis var. sinensis HOM05D006412 ORTHO05D008025 1.3e-134 483.8 282 83.7
Ciclev10013714m.g Citrus clementina HOM05D006412 ORTHO05D008025 1.3e-134 483.8 439 61.5
QL12p004163 Quercus lobata HOM05D006412 ORTHO05D008025 4.8e-134 481.9 364 70.1
TPR.G25248 Trifolium pratense HOM05D006412 ORTHO05D008025 8.1e-134 481.1 329 72.3
COL.COLO4_27119 Corchorus olitorius HOM05D006412 ORTHO05D008025 1.8e-133 479.9 364 71.2
EL10Ac2g04491 Beta vulgaris HOM05D006412 ORTHO05D008025 1.5e-132 476.9 362 68.0
Lalb_Chr03g0035001 Lupinus albus HOM05D006412 ORTHO05D008025 3.4e-132 475.7 329 70.5
MBI16_g24204_MAGBIO Magnolia biondii HOM05D006412 ORTHO05D008025 5.5e-130 468.4 359 68.0
Os01g0687500 Oryza sativa ssp. japonica HOM05D006412 ORTHO05D008025 9.3e-130 467.6 331 68.6
Hund16200 Selenicereus undatus HOM05D006412 ORTHO05D008025 2.4e-125 453.0 362 67.7
TAR629G1190 Trochodendron aralioides HOM05D006412 ORTHO05D008025 3.4e-124 449.1 264 82.6
HPP92_024416 Vanilla planifolia HOM05D006412 ORTHO05D008025 2.9e-123 446.0 338 66.3
Lj2A436G33 Lonicera japonica HOM05D006412 ORTHO05D008025 4.9e-123 445.3 333 71.8
ATR0686G130 Amborella trichopoda HOM05D006412 ORTHO05D008025 1.0e-120 437.6 315 70.8
unitig_32.g11755 Utricularia gibba HOM05D006412 ORTHO05D008025 1.9e-119 433.3 303 70.0
arahy.Tifrunner.gnm1.ann1.QMY2CQ Arachis hypogaea HOM05D002475 ORTHO05D002710 9.6e-119 431.0 345 65.5
arahy.Tifrunner.gnm1.ann1.1V0F05 Arachis hypogaea HOM05D002475 ORTHO05D008025 4.1e-117 425.6 358 63.1
MBI16_g44113_MAGBIO Magnolia biondii HOM05D006412 ORTHO05D008025 1.7e-115 420.2 368 62.0
AUR62023199 Chenopodium quinoa HOM05D006412 ORTHO05D008025 6.5e-115 418.3 361 62.9
Potri.017G123300 Populus trichocarpa HOM05D006412 ORTHO05D008025 1.4e-114 417.2 267 81.3
CiPaw.03G067700 Carya illinoinensis HOM05D006412 ORTHO05D008025 7.9e-113 411.4 268 78.7
Duzib133G0980 Durio zibethinus HOM05D006412 ORTHO05D008025 3.0e-112 409.5 300 70.7
Gohir.A07G076300 Gossypium hirsutum HOM05D006412 ORTHO05D008025 4.8e-110 402.1 270 81.5
AagrBONN_evm.TU.Sc2ySwM_344.1769 Anthoceros agrestis HOM05D006412 ORTHO05D008025 1.4e-109 400.6 337 61.7
Thecc.04G123200 Theobroma cacao HOM05D006412 ORTHO05D008025 2.0e-108 396.7 267 81.3
SHI30139 Sapria himalayana HOM05D006412 ORTHO05D008025 2.2e-107 393.3 300 64.7
Pp3c16_620 Physcomitrium patens HOM05D006412 ORTHO05D008025 6.5e-107 391.7 362 58.0
Thhalv10019000m.g Eutrema salsugineum HOM05D006412 ORTHO05D008025 7.9e-105 384.8 267 73.8
CsaV3_3G017690 Cucumis sativus L. HOM05D006412 ORTHO05D008025 6.7e-104 381.7 267 74.2
SMO147G0011 Selaginella moellendorffii HOM05D006412 ORTHO05D008025 5.7e-103 378.6 330 57.0
SEGI_18017 Sequoiadendron giganteum HOM05D006412 ORTHO05D008025 1.3e-102 377.5 290 64.5
Zm00001eb156380 Zea mays HOM05D006412 ORTHO05D008025 1.4e-98 364.0 261 71.3
CARHR058440 Cardamine hirsuta HOM05D006412 ORTHO05D008025 2.5e-98 363.2 263 71.5
Rhsim08G0084800 Rhododendron simsii HOM05D006412 ORTHO05D008025 4.7e-97 359.0 207 87.4
Psat1g052240 Pisum sativum HOM05D006412 ORTHO05D008025 5.2e-96 355.5 244 73.4
DCAR_025879 Daucus carota HOM05D006412 ORTHO05D008025 1.5e-95 354.0 311 59.8
CBR_g48389 Chara braunii HOM05D006412 ORTHO05D008025 5.3e-93 345.5 355 52.7
Haze_14211 Corylus avellana HOM05D006412 ORTHO05D008025 1.0e-83 314.7 188 84.6
Cre12.g560550 Chlamydomonas reinhardtii HOM05D006412 ORTHO05D008025 3.6e-81 306.2 342 48.0
MCO14G351 Micromonas commoda HOM05D006412 ORTHO05D008025 8.6e-75 285.0 341 46.9
Mapoly0147s0006 Marchantia polymorpha HOM05D006412 ORTHO05D008025 8.6e-67 258.5 185 68.1
PRCOL_00006745 Prasinoderma coloniale HOM05D006412 ORTHO05D008025 2.9e-62 243.4 443 35.9
AL2G24420 Arabidopsis lyrata HOM05D006412 ORTHO05D008025 1.1e-56 224.9 218 56.4
TAR206G0005 Trochodendron aralioides HOM05D006412 ORTHO05D008025 4.0e-56 223.0 149 76.5
SEGI_40413 Sequoiadendron giganteum HOM05D006412 ORTHO05D008025 6.6e-51 205.7 218 51.4
Cre09.g392729 Chlamydomonas reinhardtii HOM05D006412 ORTHO05D008025 2.1e-49 200.7 382 35.1
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 1.7e-43 181.0 148 68.9
MBI08_g39920_MAGBIO Magnolia biondii HOM05D006412 ORTHO05D008025 3.4e-39 166.8 151 59.6
Pp3s46_10 Physcomitrium patens HOM05D001724 ORTHO05D007284 4.6e-36 156.4 300 32.0
Mapoly0147s0008 Marchantia polymorpha HOM05D006412 ORTHO05D008025 6.2e-33 146.0 144 53.5
MBI13_g41159_MAGBIO Magnolia biondii HOM05D006412 ORTHO05D008025 8.1e-33 145.6 138 58.7
SEGI_25003 Sequoiadendron giganteum HOM05D006412 ORTHO05D008025 3.8e-30 136.7 116 55.2
FAN20G0335 Fragaria x ananassa HOM05D006412 ORTHO05D008025 2.7e-28 130.6 110 61.8
Rhsim08G0085000 Rhododendron simsii HOM05D006412 ORTHO05D008025 2.7e-28 130.6 96 62.5
HanXRQChr03g0068601 Helianthus annuus HOM05D006412 ORTHO05D008025 4.8e-25 119.8 74 78.4
HanXRQChr16g0531301 Helianthus annuus HOM05D006412 ORTHO05D008025 4.8e-25 119.8 81 71.6
Ca_29143_v3 Cicer arietinum L. HOM05D006412 ORTHO05D007284 1.8e-24 117.9 303 30.7
HanXRQChr01g0030591 Helianthus annuus HOM05D006412 ORTHO05D008025 5.3e-24 116.3 72 77.8
AL2G23010 Arabidopsis lyrata HOM05D006412 ORTHO05D008025 4.5e-23 113.2 91 67.0
SGA_v2.0_scaffold9G04970 Striga asiatica HOM05D006412 ORTHO05D008025 7.1e-21 105.9 67 76.1
Ca_29267_v3 Cicer arietinum L. HOM05D005388 ORTHO05D006281 5.3e-08 63.2 104 35.6
unitig_22.g6241 Utricularia gibba HOM05D003894 ORTHO05D004584 3.4e-07 60.5 182 25.3
Gohir.A03G007600 Gossypium hirsutum HOM05D003894 ORTHO05D004584 1.0e-06 58.9 118 32.2
TAR629G1092 Trochodendron aralioides HOM05D003894 ORTHO05D004584 1.0e-06 58.9 139 28.8
Cre10.g430450 Chlamydomonas reinhardtii HOM05D003894 ORTHO05D004584 2.2e-06 57.8 116 33.6
FAN08G1835 Fragaria x ananassa HOM05D005388 ORTHO05D006281 2.2e-06 57.8 147 25.9
Gorai.003G172100 Gossypium raimondii HOM05D003894 ORTHO05D004584 2.2e-06 57.8 118 32.2
RcHm_v2.0_Chr7g0203621 Rosa chinensis HOM05D003894 ORTHO05D004584 2.2e-06 57.8 182 25.3
Cfa024956 Carpinus fangiana HOM05D003894 ORTHO05D004584 2.9e-06 57.4 181 28.7
Ah.10g037930 Amaranthus hybridus HOM05D006412 ORTHO05D008025 3.8e-06 57.0 32 81.2
DCAR_008499 Daucus carota HOM05D003894 ORTHO05D004584 3.8e-06 57.0 142 26.1
Pp3s32_101 Physcomitrium patens HOM05D005388 ORTHO05D006281 3.8e-06 57.0 127 29.9
PRCOL_00002707 Prasinoderma coloniale HOM05D003894 ORTHO05D004584 3.8e-06 57.0 140 30.7
Oeu044418.1 Olea europaea HOM05D005388 ORTHO05D006281 4.9e-06 56.6 150 26.0
Peaxi162Scf01022g00325 Petunia axillaris HOM05D003894 ORTHO05D004584 4.9e-06 56.6 144 25.7
RcHm_v2.0_Chr7g0213451 Rosa chinensis HOM05D005388 ORTHO05D006281 4.9e-06 56.6 147 25.2
Sabra03G0048400 Salix brachista HOM05D003894 ORTHO05D004584 4.9e-06 56.6 142 26.8
AagrBONN_evm.TU.Sc2ySwM_117.1331 Anthoceros agrestis HOM05D003894 ORTHO05D004584 6.5e-06 56.2 145 31.0
Eucgr.D02094 Eucalyptus grandis HOM05D003894 ORTHO05D004584 6.5e-06 56.2 173 27.7
Potri.003G078000 Populus trichocarpa HOM05D003894 ORTHO05D004584 6.5e-06 56.2 103 35.0
arahy.Tifrunner.gnm1.ann1.0BBG36 Arachis hypogaea HOM05D003894 ORTHO05D004584 8.4e-06 55.8 120 28.3


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