Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030878001 Vitis vinifera HOM05D002536 ORTHO05D008091 2.6e-167 592.0 313 100.0
GSVIVG01030879001 Vitis vinifera HOM05D002536 ORTHO05D008091 6.9e-136 487.6 264 97.7
Cfa007856 Carpinus fangiana HOM05D002536 ORTHO05D008091 7.4e-130 467.6 320 79.7
Dinv19004 Davidia involucrata HOM05D002536 ORTHO05D008091 2.3e-123 446.0 322 78.0
FAN23G2237 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.7e-121 439.9 314 76.8
CiPaw.04G045700 Carya illinoinensis HOM05D002536 ORTHO05D008091 6.3e-121 438.0 320 76.9
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 6.3e-121 438.0 298 79.9
Prupe.3G152500 Prunus persica HOM05D002536 ORTHO05D008091 8.2e-121 437.6 320 76.2
Sabra04G0061700 Salix brachista HOM05D002536 ORTHO05D008091 2.0e-119 433.0 326 70.9
Hma1.2p1_0283F.1_g113560 Hydrangea macrophylla HOM05D002536 ORTHO05D008091 2.6e-119 432.6 324 75.3
QL05p059601 Quercus lobata HOM05D002536 ORTHO05D008091 4.5e-119 431.8 313 76.7
QL05p059839 Quercus lobata HOM05D002536 ORTHO05D008091 1.3e-118 430.3 313 76.7
TAR622G0880 Trochodendron aralioides HOM05D002536 ORTHO05D008091 5.0e-118 428.3 288 78.8
Atru.chr1.1780 Acer truncatum HOM05D002536 ORTHO05D008091 1.4e-117 426.8 313 72.8
Atru.chr1.1783 Acer truncatum HOM05D002536 ORTHO05D008091 1.9e-117 426.4 313 73.2
CANSAT78G0797 Cannabis sativa HOM05D002536 ORTHO05D008091 4.2e-117 425.2 316 74.1
FvH4_1g30050 Fragaria vesca HOM05D002536 ORTHO05D008091 1.6e-116 423.3 314 74.2
Potri.004G091600 Populus trichocarpa HOM05D002536 ORTHO05D008091 2.1e-116 422.9 326 70.6
Actinidia15922 Actinidia chinensis HOM05D002536 ORTHO05D008091 8.0e-116 421.0 318 71.4
RcHm_v2.0_Chr3g0492091 Rosa chinensis HOM05D002536 ORTHO05D008091 6.7e-115 417.9 320 73.1
TWI53G1346 Tripterygium wilfordii HOM05D002536 ORTHO05D008091 2.6e-114 416.0 295 71.9
Ah.10g037920 Amaranthus hybridus HOM05D002536 ORTHO05D008091 7.4e-114 414.5 316 69.0
Sed0014940 Sechium edule HOM05D002536 ORTHO05D008091 9.7e-114 414.1 315 71.7
Ca_06135_v3 Cicer arietinum L. HOM05D002536 ORTHO05D008091 2.8e-113 412.5 319 70.2
MELO3C020303.2 Cucumis melo HOM05D002536 ORTHO05D008091 3.7e-113 412.1 309 70.6
FAN26G2179 Fragaria x ananassa HOM05D002536 ORTHO05D008091 6.3e-113 411.4 314 72.6
AUR62023248 Chenopodium quinoa HOM05D002536 ORTHO05D008091 8.2e-113 411.0 263 78.7
QL05p058873 Quercus lobata HOM05D002536 ORTHO05D008091 1.8e-112 409.8 265 82.6
Medtr5g087440 Medicago truncatula HOM05D002536 ORTHO05D008091 3.1e-112 409.1 319 69.0
Hund13690 Selenicereus undatus HOM05D002536 ORTHO05D008091 4.1e-112 408.7 265 80.0
Lj2P435T31 Lonicera japonica HOM05D002536 ORTHO05D008091 1.6e-111 406.8 260 80.8
Medtr5g086010 Medicago truncatula HOM05D002536 ORTHO05D008091 2.0e-111 406.4 319 68.3
TPR.G11790 Trifolium pratense HOM05D002536 ORTHO05D008091 2.6e-111 406.0 320 69.7
EL10Ac2g04494 Beta vulgaris HOM05D002536 ORTHO05D008091 4.5e-111 405.2 263 77.9
LjContig00564g0008816 Lotus japonicus HOM05D002536 ORTHO05D008091 4.5e-111 405.2 268 77.2
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 5.9e-111 404.8 264 82.6
Psat2g023480 Pisum sativum HOM05D002536 ORTHO05D008091 7.7e-111 404.4 319 68.0
Rhsim10G0078900 Rhododendron simsii HOM05D002536 ORTHO05D008091 7.7e-111 404.4 266 78.6
HanXRQChr11g0325231 Helianthus annuus HOM05D002536 ORTHO05D008091 1.7e-110 403.3 319 69.6
Nn3g18195 Nelumbo nucifera HOM05D002536 ORTHO05D008091 2.9e-110 402.5 320 71.9
Aqoxy3G00142 Aquilegia oxysepala HOM05D002536 ORTHO05D008091 3.8e-110 402.1 290 72.8
ECA232G4028 Erigeron canadensis HOM05D002536 ORTHO05D008091 6.5e-110 401.4 265 78.5
CsaV3_3G017670 Cucumis sativus L. HOM05D002536 ORTHO05D008091 8.5e-110 401.0 305 70.5
Eucgr.F02816 Eucalyptus grandis HOM05D002536 ORTHO05D008091 1.9e-109 399.8 322 68.6
DCAR_008922 Daucus carota HOM05D000103 ORTHO05D008091 9.4e-109 397.5 263 78.7
Lalb_Chr03g0036071 Lupinus albus HOM05D002536 ORTHO05D008091 2.1e-108 396.4 322 66.8
Phvul.004G133300 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 2.1e-108 396.4 322 71.1
Ciclev10012168m.g Citrus clementina HOM05D002536 ORTHO05D008091 3.6e-108 395.6 332 65.4
ClCG05G010840 Citrullus lanatus HOM05D002536 ORTHO05D008091 4.7e-108 395.2 270 76.7
PGR004G1229 Punica granatum HOM05D002536 ORTHO05D008091 4.7e-108 395.2 313 71.2
arahy.Tifrunner.gnm1.ann1.SZ684F Arachis hypogaea HOM05D002536 ORTHO05D008091 1.4e-107 393.7 320 67.2
VMungo1309G0890 Vigna mungo HOM05D002536 ORTHO05D008091 1.8e-107 393.3 322 69.6
FAN19G1396 Fragaria x ananassa HOM05D002536 ORTHO05D008091 4.0e-107 392.1 264 80.3
arahy.Tifrunner.gnm1.ann1.NZLK2N Arachis hypogaea HOM05D002536 ORTHO05D008091 5.2e-107 391.7 263 76.0
Phvul.008G162400 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 7.5e-106 387.9 321 69.5
Sc10g0000870 Simmondsia chinensis HOM05D002536 ORTHO05D008091 1.3e-105 387.1 322 66.5
Lsat_1_v5_gn_4_154760 Lactuca sativa HOM05D002536 ORTHO05D008091 1.7e-105 386.7 282 75.9
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 2.2e-105 386.3 265 75.1
Cpa.g.sc116.19 Carica papaya HOM05D002536 ORTHO05D008091 2.8e-105 386.0 314 67.5
Gohir.A04G142800 Gossypium hirsutum HOM05D002536 ORTHO05D008091 6.3e-105 384.8 330 67.9
Duzib248G1146 Durio zibethinus HOM05D002536 ORTHO05D008091 8.2e-105 384.4 324 68.5
Gohir.D04G186100 Gossypium hirsutum HOM05D002536 ORTHO05D008091 1.8e-104 383.3 328 67.4
Thecc.02G292900 Theobroma cacao HOM05D002536 ORTHO05D008091 1.8e-104 383.3 324 68.5
COL.COLO4_16592 Corchorus olitorius HOM05D002536 ORTHO05D008091 2.4e-104 382.9 324 65.4
Sopen02g035940 Solanum pennellii HOM05D002536 ORTHO05D008091 3.1e-104 382.5 317 69.1
Gorai.012G182500 Gossypium raimondii HOM05D002536 ORTHO05D008091 5.3e-104 381.7 328 67.1
Cc07_g08230 Coffea canephora HOM05D002536 ORTHO05D008091 1.2e-103 380.6 325 65.5
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 3.5e-103 379.0 265 74.3
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 5.9e-103 378.3 277 69.7
Solyc02g091320.4 Solanum lycopersicum HOM05D002536 ORTHO05D008091 5.9e-103 378.3 317 68.5
PGSC0003DMG400030642 Solanum tuberosum HOM05D002536 ORTHO05D008091 7.7e-103 377.9 318 69.5
Nitab4.5_0002248g0020 Nicotiana tabacum HOM05D002536 ORTHO05D008091 8.5e-102 374.4 318 69.2
Nitab4.5_0002456g0160 Nicotiana tabacum HOM05D002536 ORTHO05D008091 1.1e-101 374.0 316 68.7
Sp6g26760 Schrenkiella parvula HOM05D002536 ORTHO05D008091 1.9e-101 373.2 271 70.1
CAN.G625.80 Capsicum annuum HOM05D002536 ORTHO05D008091 4.2e-101 372.1 317 68.1
Peaxi162Scf00803g00531 Petunia axillaris HOM05D002536 ORTHO05D008091 5.5e-101 371.7 315 67.6
A02p04220 Brassica napus HOM05D002536 ORTHO05D008091 6.1e-100 368.2 281 68.3
BraA02t05385Z Brassica rapa HOM05D002536 ORTHO05D008091 6.1e-100 368.2 281 68.3
Migut.H00262 Erythranthe guttata HOM05D002536 ORTHO05D008091 1.8e-99 366.7 321 65.4
Thhalv10014009m.g Eutrema salsugineum HOM05D002536 ORTHO05D008091 2.3e-99 366.3 283 66.1
SalBow3G4287 Salvia bowleyana HOM05D002536 ORTHO05D008091 2.3e-99 366.3 318 64.2
MSTRG.23612 Avicennia marina HOM05D002536 ORTHO05D008091 4.0e-99 365.5 316 65.2
arahy.Tifrunner.gnm1.ann1.CBV847 Arachis hypogaea HOM05D002536 ORTHO05D008091 1.2e-98 364.0 253 72.3
arahy.Tifrunner.gnm1.ann1.YLI9AK Arachis hypogaea HOM05D002536 ORTHO05D008091 1.2e-98 364.0 246 74.4
Oeu047422.1 Olea europaea HOM05D002536 ORTHO05D008091 1.2e-98 364.0 321 65.4
QL05p059463 Quercus lobata HOM05D002536 ORTHO05D008091 1.5e-98 363.6 302 67.2
BolC2t06821H Brassica oleracea HOM05D002536 ORTHO05D008091 2.6e-98 362.8 282 65.6
C02p09100 Brassica napus HOM05D002536 ORTHO05D008091 1.7e-97 360.1 289 64.4
Manes.01G115200 Manihot esculenta HOM05D002536 ORTHO05D008091 2.8e-97 359.4 235 79.6
PSO782G0049 Papaver somniferum HOM05D002536 ORTHO05D008091 1.0e-94 350.9 329 61.1
PSO478G1642 Papaver somniferum HOM05D002536 ORTHO05D008091 7.2e-93 344.7 327 60.9
CARHR195750 Cardamine hirsuta HOM05D002536 ORTHO05D008091 9.5e-93 344.4 287 63.8
Carub.0006s1568 Capsella rubella HOM05D002536 ORTHO05D008091 1.6e-92 343.6 307 62.9
AL6G28530 Arabidopsis lyrata HOM05D002536 ORTHO05D008091 3.6e-92 342.4 306 62.1
CDE07G0699 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 6.1e-92 341.7 267 70.4
ATR0041G006 Amborella trichopoda HOM05D002536 ORTHO05D008091 7.5e-90 334.7 262 69.8
Os01g0125700 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D008091 1.6e-87 327.0 257 65.8
FAN28G0948 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.0e-86 324.3 245 72.7
AUR62023202 Chenopodium quinoa HOM05D002536 ORTHO05D008091 8.6e-86 321.2 267 65.2
AT5G17460 Arabidopsis thaliana HOM05D002536 ORTHO05D008091 2.3e-83 313.2 235 68.9
Glyma.14G164000 Glycine max HOM05D002536 ORTHO05D008091 1.2e-82 310.8 320 62.2
BcaC03g13522 Brassica carinata HOM05D002536 ORTHO05D008091 2.2e-81 306.6 249 62.2
SHI17045 Sapria himalayana HOM05D002536 ORTHO05D008091 1.2e-79 300.8 270 64.8
SGA_v2.0_scaffold6G03263 Striga asiatica HOM05D002536 ORTHO05D008091 2.3e-75 286.6 247 63.6
SGA_v2.0_scaffold6G03262 Striga asiatica HOM05D002536 ORTHO05D008091 1.5e-74 283.9 249 59.8
SGA_v2.0_scaffold6G03266 Striga asiatica HOM05D002536 ORTHO05D008091 4.4e-74 282.3 238 65.1
Zm00001eb334950 Zea mays HOM05D002536 ORTHO05D008091 3.5e-71 272.7 180 77.2
SEGI_34238 Sequoiadendron giganteum HOM05D002536 ORTHO05D008091 6.4e-65 251.9 314 49.0
MD09G1260800 Malus domestica HOM05D002536 ORTHO05D008091 1.4e-64 250.8 183 71.6
MBI16_g46274_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D008091 5.6e-61 238.8 155 77.4
Glyma.13G079200 Glycine max HOM05D002536 ORTHO05D008091 2.8e-60 236.5 230 62.2
SGA_v2.0_scaffold6G03268 Striga asiatica HOM05D002536 ORTHO05D008091 3.4e-58 229.6 282 51.1
unitig_899.g15351 Utricularia gibba HOM05D002536 ORTHO05D008091 3.8e-57 226.1 207 58.9
FAN28G0812 Fragaria x ananassa HOM05D002536 ORTHO05D008091 3.0e-46 189.9 264 50.4
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 5.3e-43 179.1 129 70.5
MD09G1260900 Malus domestica HOM05D002536 ORTHO05D008091 9.3e-40 168.3 181 55.8
A10p21940 Brassica napus HOM05D002536 ORTHO05D008091 1.4e-24 117.9 81 72.8
HPP92_000766 Vanilla planifolia HOM05D002536 ORTHO05D008091 1.8e-22 110.9 112 50.0
BcaC04g18790 Brassica carinata HOM05D002536 ORTHO05D008091 3.6e-15 86.7 71 64.8
BolC9t58807H Brassica oleracea HOM05D002536 ORTHO05D008091 1.4e-14 84.7 84 56.0
C09p59690 Brassica napus HOM05D002536 ORTHO05D008091 6.7e-14 82.4 71 63.4
BraA10t44252Z Brassica rapa HOM05D002536 ORTHO05D008091 1.1e-08 65.1 66 54.5
A10p21930 Brassica napus HOM05D002536 ORTHO05D008091 4.2e-08 63.2 66 54.5
CDE06G0370 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 1.6e-07 61.2 69 49.3


User provided reference genes

Program Settings