Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 0.0e+00 1414.4 704 100.0
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 2.5e-178 629.8 698 51.0
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 3.5e-172 609.4 749 48.1
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 1.0e-166 591.3 805 44.6
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 8.8e-163 578.2 727 47.2
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 3.3e-162 576.2 721 46.5
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 3.1e-160 569.7 709 48.2
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 7.7e-159 565.1 742 46.6
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 8.5e-158 561.6 989 39.4
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 3.7e-153 546.2 725 46.1
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 4.8e-153 545.8 674 47.2
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.3e-150 537.7 772 44.3
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 8.5e-150 535.0 639 49.5
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 4.7e-148 529.3 626 49.0
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 2.3e-147 526.9 689 47.0
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 3.3e-146 523.1 941 38.7
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 3.7e-145 519.6 708 43.8
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 1.8e-144 517.3 667 46.3
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.4e-144 516.9 751 44.9
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 9.1e-144 515.0 410 61.7
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 7.7e-143 511.9 751 44.6
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 5.5e-141 505.8 701 44.2
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 2.7e-140 503.4 771 41.9
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 2.3e-139 500.4 979 37.0
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 5.2e-139 499.2 772 41.7
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 2.0e-138 497.3 558 50.4
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 2.0e-138 497.3 781 42.4
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 3.7e-137 493.0 657 45.4
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 3.7e-137 493.0 657 45.2
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 6.3e-137 492.3 594 48.8
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 1.8e-136 490.7 554 49.6
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 1.8e-136 490.7 590 48.6
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 2.4e-136 490.3 579 49.6
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 2.0e-135 487.3 534 50.4
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 4.5e-135 486.1 525 52.2
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 2.9e-134 483.4 548 50.7
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.2e-132 478.0 608 47.5
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 1.6e-132 477.6 482 55.2
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 6.1e-132 475.7 600 47.5
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 6.1e-132 475.7 328 69.2
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 4.0e-131 473.0 564 48.9
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 5.2e-131 472.6 711 41.9
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 3.1e-128 463.4 576 49.1
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 7.0e-128 462.2 596 46.1
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 5.9e-127 459.1 703 41.8
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 5.0e-126 456.1 511 51.7
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 1.5e-125 454.5 558 49.1
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 4.2e-125 453.0 530 49.6
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 1.2e-124 451.4 547 49.4
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 1.2e-124 451.4 670 43.1
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 4.7e-124 449.5 530 47.9
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 6.1e-124 449.1 625 43.8
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 1.0e-123 448.4 557 48.5
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 5.7e-122 442.6 365 62.5
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 3.7e-121 439.9 311 67.5
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 1.4e-120 438.0 521 48.8
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 2.9e-118 430.3 454 53.1
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 4.3e-117 426.4 571 44.8
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 1.6e-116 424.5 553 46.1
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 2.1e-116 424.1 395 57.7
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 4.0e-115 419.9 709 42.3
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.2e-114 418.3 527 46.3
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 1.9e-112 411.0 574 43.6
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 3.9e-110 403.3 358 58.7
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 1.2e-106 391.7 439 49.9
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 1.5e-106 391.3 429 50.8
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 2.2e-105 387.5 515 45.6
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 3.7e-105 386.7 330 59.7
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 8.3e-105 385.6 356 56.2
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 3.5e-103 380.2 375 55.5
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 1.0e-102 378.6 322 60.9
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 3.6e-100 370.2 597 41.9
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 4.7e-100 369.8 508 45.7
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 1.2e-98 365.2 321 57.9
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 1.2e-98 365.2 403 49.9
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 3.4e-98 363.6 358 52.8
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 3.2e-96 357.1 545 42.9
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 1.2e-95 355.1 353 51.6
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 3.5e-95 353.6 651 39.2
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 1.3e-94 351.7 262 65.6
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 5.1e-94 349.7 262 65.3
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 5.1e-94 349.7 262 65.3
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 1.5e-93 348.2 415 46.7
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 4.7e-92 343.2 287 60.3
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 2.4e-91 340.9 479 41.3
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 8.4e-89 332.4 291 56.7
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 5.4e-88 329.7 455 43.5
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 2.7e-87 327.4 331 50.2
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 7.8e-87 325.9 218 69.7
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 3.0e-86 323.9 313 55.6
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 8.7e-86 322.4 193 74.6
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 1.9e-85 321.2 212 69.8
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 9.3e-80 302.4 721 32.5
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 9.6e-77 292.4 443 42.2
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 9.0e-67 259.2 254 50.0
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.7e-65 255.0 479 36.3
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 6.0e-63 246.5 275 49.1
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 2.3e-62 244.6 422 40.5
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.1e-56 225.7 245 51.0
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 3.3e-53 214.2 252 43.3
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 5.7e-53 213.4 233 54.5
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 5.7e-53 213.4 119 82.4
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 7.4e-53 213.0 579 33.3
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 1.4e-51 208.8 117 77.8
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 2.4e-51 208.0 181 52.5
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.8e-46 191.8 202 54.5
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 1.1e-40 172.6 218 50.0
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 8.8e-30 136.3 228 41.7
Atru.chr1.1941 Acer truncatum HOM05D006714 ORTHO05D008103 5.5e-24 117.1 253 35.6
QL93p0100_0715 Quercus lobata HOM05D006714 ORTHO05D008103 8.0e-23 113.2 270 34.4
Oeu032321.1 Olea europaea HOM05D006714 ORTHO05D008103 2.5e-08 65.1 258 26.4


User provided reference genes

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