Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 3.0e-213 745.0 391 100.0
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 9.8e-156 553.9 403 73.4
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 2.4e-154 549.3 385 75.3
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 6.2e-150 534.6 394 71.6
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 7.5e-148 527.7 395 72.7
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 6.4e-147 524.6 380 73.2
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.9e-146 523.1 397 70.3
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 2.7e-145 519.2 386 71.5
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 3.3e-143 512.3 397 69.8
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 7.3e-143 511.1 399 69.4
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 9.5e-143 510.8 390 70.3
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 2.1e-142 509.6 404 67.8
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 9.9e-140 500.7 395 67.8
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 3.2e-138 495.7 394 67.0
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 1.2e-137 493.8 416 64.4
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 3.5e-137 492.3 392 65.8
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 1.3e-136 490.3 393 66.7
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 3.9e-136 488.8 434 62.7
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 5.1e-136 488.4 434 62.9
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 6.6e-136 488.0 395 66.8
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 2.4e-133 479.6 361 66.8
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.6e-132 476.1 397 66.2
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 7.6e-132 474.6 398 63.3
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 1.3e-131 473.8 393 62.8
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 1.7e-131 473.4 388 64.2
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 4.9e-131 471.9 464 57.8
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 1.9e-130 469.9 381 64.8
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 2.4e-130 469.5 402 64.4
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 2.3e-128 463.0 393 62.3
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 1.3e-126 457.2 396 63.6
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 1.1e-125 454.1 394 60.7
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 4.0e-125 452.2 397 60.5
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 4.0e-125 452.2 374 63.1
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 9.0e-125 451.1 376 62.2
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 2.0e-124 449.9 400 61.8
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 4.4e-124 448.7 403 59.6
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 7.6e-124 448.0 393 61.1
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 1.3e-123 447.2 395 61.8
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 2.2e-123 446.4 389 60.9
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 1.1e-122 444.1 393 60.3
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 7.1e-122 441.4 383 60.1
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 1.6e-121 440.3 389 60.7
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 3.5e-121 439.1 377 59.7
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 6.0e-121 438.3 403 58.8
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 7.9e-121 438.0 405 59.8
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 1.3e-120 437.2 323 69.0
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 2.3e-120 436.4 393 58.0
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 8.7e-120 434.5 394 62.2
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 1.5e-119 433.7 398 61.3
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 2.5e-119 433.0 399 60.4
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.3e-118 430.6 315 70.2
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.1e-118 429.9 366 62.6
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 6.2e-118 428.3 400 60.0
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 6.2e-118 428.3 383 56.9
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 3.1e-117 426.0 387 60.7
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 3.1e-117 426.0 386 60.9
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 6.9e-117 424.9 388 61.1
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 2.2e-115 419.9 399 58.9
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 3.8e-115 419.1 399 58.6
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 1.4e-114 417.2 399 58.4
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 1.4e-114 417.2 394 60.2
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 2.4e-114 416.4 381 60.1
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 2.4e-114 416.4 331 63.4
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 4.2e-114 415.6 399 58.4
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 2.7e-113 412.9 399 58.4
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 8.7e-112 407.9 412 56.6
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 1.1e-111 407.5 412 56.6
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 1.4e-106 390.6 397 57.4
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 2.3e-104 383.3 401 54.6
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 3.1e-93 346.3 280 66.4
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.5e-92 344.0 279 65.9
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 1.1e-90 337.8 381 53.3
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 1.5e-87 327.4 380 52.1
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 2.0e-87 327.0 386 51.8
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 9.1e-85 318.2 363 48.2
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 5.7e-79 298.9 233 70.0
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 3.7e-78 296.2 288 56.6
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 8.2e-78 295.0 289 57.1
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 2.4e-77 293.5 314 53.8
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 5.0e-75 285.8 354 48.0
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.7e-70 270.8 251 60.6
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 2.4e-69 266.9 319 48.0
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 2.5e-58 230.3 167 66.5
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 1.2e-55 221.5 397 40.8
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 2.0e-52 210.7 164 64.6
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 2.3e-51 207.2 384 33.3
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 2.9e-51 206.8 231 51.1
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 1.7e-43 181.0 355 32.7
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 1.2e-39 168.3 296 34.1
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 7.8e-36 155.6 209 50.7
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 7.3e-34 149.1 293 33.1
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 2.9e-30 137.1 120 60.0
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 1.7e-27 127.9 91 67.0
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.1e-21 108.6 94 58.5
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 5.4e-21 106.3 71 74.6
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 4.4e-15 86.7 67 64.2
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 2.5e-10 70.9 334 25.4
Cre07.g355550 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 2.2e-06 57.8 298 21.1


User provided reference genes

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