Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 3.2e-95 351.7 167 100.0
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 3.8e-80 301.6 166 84.3
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 8.4e-80 300.4 168 83.9
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 2.7e-78 295.4 167 82.6
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 4.6e-78 294.7 167 81.4
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 1.7e-77 292.7 167 79.6
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 6.6e-77 290.8 167 79.6
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 6.6e-77 290.8 167 79.6
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 9.6e-76 287.0 165 78.8
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 1.4e-74 283.1 170 77.1
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.8e-74 282.7 166 77.7
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 2.4e-74 282.3 164 79.9
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 3.1e-74 282.0 165 78.2
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 5.2e-74 281.2 162 78.4
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 5.2e-74 281.2 170 77.1
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 9.0e-74 280.4 165 79.4
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.5e-73 279.6 168 78.6
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 1.5e-73 279.6 167 79.0
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 3.4e-73 278.5 168 76.2
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 3.4e-73 278.5 166 76.5
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 4.4e-73 278.1 169 75.7
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 2.2e-72 275.8 164 76.2
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 2.2e-72 275.8 164 77.4
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 2.2e-72 275.8 170 74.1
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 2.9e-72 275.4 163 77.9
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 4.9e-72 274.6 166 72.3
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 4.9e-72 274.6 164 76.2
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 8.4e-72 273.9 165 76.4
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.4e-71 272.3 166 71.7
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 3.2e-71 271.9 167 75.4
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 7.1e-71 270.8 164 75.0
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 1.6e-70 269.6 165 77.0
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 1.6e-70 269.6 165 74.5
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 2.7e-70 268.9 163 77.3
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 2.7e-70 268.9 165 73.9
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 3.5e-70 268.5 167 76.0
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 6.0e-70 267.7 166 75.3
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 6.0e-70 267.7 166 75.3
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.7e-69 266.2 164 72.0
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.7e-69 266.2 165 74.5
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 1.7e-69 266.2 165 73.9
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 3.9e-69 265.0 164 71.3
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 5.1e-69 264.6 163 75.5
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 6.6e-69 264.2 166 73.5
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 8.7e-69 263.8 165 72.7
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.9e-68 262.7 164 70.7
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 1.9e-68 262.7 168 74.4
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 3.3e-68 261.9 165 71.5
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 4.3e-68 261.5 168 73.8
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 5.6e-68 261.2 165 71.5
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 1.6e-67 259.6 167 70.1
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 3.6e-67 258.5 165 72.7
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 3.6e-67 258.5 166 75.3
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 8.1e-67 257.3 164 74.4
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 2.4e-66 255.8 167 71.3
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.4e-66 255.8 167 71.3
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 3.1e-66 255.4 166 73.5
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.5e-65 253.1 166 69.3
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 1.5e-65 253.1 166 72.9
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 2.0e-65 252.7 168 70.2
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 4.5e-65 251.5 166 69.9
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 7.6e-65 250.8 166 70.5
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 9.9e-65 250.4 166 71.1
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 6.4e-64 247.7 166 68.7
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 8.4e-64 247.3 166 69.9
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 1.4e-63 246.5 165 66.7
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.9e-63 246.1 167 71.3
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 2.4e-63 245.7 165 66.7
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 5.4e-63 244.6 167 68.9
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 9.3e-63 243.8 165 66.7
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 9.3e-63 243.8 166 68.1
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 9.3e-63 243.8 164 67.1
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 1.2e-62 243.4 160 67.5
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 1.6e-62 243.0 165 66.1
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 7.9e-62 240.7 161 67.7
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 3.9e-61 238.4 162 66.7
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 1.5e-60 236.5 165 67.9
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.5e-60 236.5 162 66.7
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 1.5e-60 236.5 162 67.9
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.9e-60 236.1 162 66.7
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 4.3e-60 235.0 156 69.9
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 1.1e-58 230.3 169 66.9
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 1.8e-58 229.6 169 66.3
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 4.0e-58 228.4 170 66.5
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 9.9e-57 223.8 141 73.0
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 9.9e-57 223.8 167 62.3
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 1.3e-56 223.4 166 65.7
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.2e-56 222.6 143 71.3
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 4.9e-56 221.5 171 64.3
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 5.5e-55 218.0 142 69.7
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 7.1e-55 217.6 167 60.5
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 2.7e-54 215.7 129 80.6
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 6.0e-54 214.5 166 60.8
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 1.0e-53 213.8 141 67.4
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 1.3e-53 213.4 169 62.1
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 8.7e-53 210.7 141 66.7
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 4.3e-52 208.4 169 61.5
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 5.6e-52 208.0 164 56.1
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 2.1e-51 206.1 129 73.6
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 3.7e-51 205.3 169 59.2
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 5.3e-50 201.4 171 60.2
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.1e-47 193.7 170 57.6
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 7.1e-47 191.0 118 71.2
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 2.7e-46 189.1 161 51.6
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 1.0e-45 187.2 176 55.7
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 2.3e-45 186.0 166 49.4
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 1.5e-44 183.3 162 56.2
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.3e-43 180.3 161 52.8
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 3.8e-40 168.7 156 54.5
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 4.3e-36 155.2 143 54.5
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 4.8e-35 151.8 156 50.0
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 3.8e-32 142.1 85 76.5
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 8.5e-32 141.0 89 75.3
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.4e-31 140.2 168 45.8
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 7.9e-30 134.4 132 53.0
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 4.8e-27 125.2 107 58.9
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 2.7e-22 109.4 153 42.5
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.6e-17 92.8 51 74.5
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 5.2e-13 78.6 119 41.2
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 3.7e-11 72.4 44 70.5


User provided reference genes

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