Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030170001 Vitis vinifera HOM05D006969 ORTHO05D008826 2.0e-95 352.8 240 100.0
TAR623G0846 Trochodendron aralioides HOM05D006969 ORTHO05D008826 1.1e-40 171.0 157 60.5
Dinv16967 Davidia involucrata HOM05D006969 ORTHO05D008826 1.9e-40 170.2 176 57.4
Cpa.g.sc86.76 Carica papaya HOM05D006969 ORTHO05D008826 1.5e-37 160.6 159 56.0
Haze_21189 Corylus avellana HOM05D006969 ORTHO05D008826 1.8e-35 153.7 177 55.9
Potri.016G138300 Populus trichocarpa HOM05D006969 ORTHO05D008826 9.0e-35 151.4 161 56.5
Manes.09G123300 Manihot esculenta HOM05D006969 ORTHO05D008826 1.2e-34 151.0 161 54.7
Cfa017015 Carpinus fangiana HOM05D006969 ORTHO05D008826 5.8e-34 148.7 158 57.6
Sabra04G0154500 Salix brachista HOM05D006969 ORTHO05D008826 5.8e-34 148.7 160 55.6
Potri.006G109400 Populus trichocarpa HOM05D006969 ORTHO05D008826 7.6e-34 148.3 162 54.9
Prupe.6G295300 Prunus persica HOM05D006969 ORTHO05D008826 1.7e-33 147.1 187 49.7
Sabra06G0085100 Salix brachista HOM05D006969 ORTHO05D008826 2.2e-33 146.7 162 54.3
CsaV3_4G027220 Cucumis sativus L. HOM05D006969 ORTHO05D008826 3.8e-33 146.0 164 55.5
QL07p031897 Quercus lobata HOM05D006969 ORTHO05D008826 4.9e-33 145.6 166 56.0
ClCG04G006330 Citrullus lanatus HOM05D006969 ORTHO05D008826 1.1e-32 144.4 169 53.8
MD04G1175800 Malus domestica HOM05D006969 ORTHO05D008826 1.1e-32 144.4 154 53.2
MELO3C025225.2 Cucumis melo HOM05D006969 ORTHO05D008826 3.5e-31 139.4 180 50.6
MD05G1222900 Malus domestica HOM05D006969 ORTHO05D008826 3.0e-30 136.3 158 48.7
MD12G1190200 Malus domestica HOM05D006969 ORTHO05D008826 3.0e-30 136.3 158 48.7
TWI74G1273 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 8.7e-30 134.8 164 53.0
CiPaw.10G165400 Carya illinoinensis HOM05D006969 ORTHO05D008826 3.3e-29 132.9 167 49.7
Aqoxy2G00712 Aquilegia oxysepala HOM05D006969 ORTHO05D008826 2.2e-28 130.2 156 51.9
Sed0006435 Sechium edule HOM05D006969 ORTHO05D008826 1.1e-27 127.9 159 53.5
Cc06_g18790 Coffea canephora HOM05D006969 ORTHO05D008826 1.4e-27 127.5 168 50.6
PGR004G2771 Punica granatum HOM05D006969 ORTHO05D008826 4.1e-27 125.9 173 48.0
Solyc06g082850.4 Solanum lycopersicum HOM05D006969 ORTHO05D008826 2.6e-26 123.2 190 44.2
Rhsim04G0121200 Rhododendron simsii HOM05D006969 ORTHO05D008826 4.5e-26 122.5 149 51.7
Sopen06g034210 Solanum pennellii HOM05D006969 ORTHO05D008826 7.6e-26 121.7 190 44.2
Psat3g118680 Pisum sativum HOM05D006969 ORTHO05D008826 1.3e-25 120.9 186 41.9
Sc20g0007050 Simmondsia chinensis HOM05D006969 ORTHO05D008826 6.5e-25 118.6 176 46.6
RcHm_v2.0_Chr3g0460321 Rosa chinensis HOM05D006969 ORTHO05D008826 1.1e-24 117.9 160 46.2
vmacro08948 Vaccinium macrocarpon HOM05D006969 ORTHO05D008826 1.4e-24 117.5 171 48.0
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 4.2e-24 115.9 156 46.2
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 4.2e-24 115.9 156 46.2
Duzib212G0164 Durio zibethinus HOM05D006969 ORTHO05D008826 5.5e-24 115.5 163 45.4
CANSAT25G2928 Cannabis sativa HOM05D006969 ORTHO05D008826 7.2e-24 115.2 174 44.3
Glyma.09G273800 Glycine max HOM05D006969 ORTHO05D008826 7.2e-24 115.2 170 42.9
ECA248G1739 Erigeron canadensis HOM05D000251 ORTHO05D002506 1.2e-23 114.4 169 45.6
MSTRG.5490 Avicennia marina HOM05D006969 ORTHO05D008826 1.6e-23 114.0 179 43.6
FAN05G1635 Fragaria x ananassa HOM05D006969 ORTHO05D008826 2.1e-23 113.6 156 44.9
QL07p007469 Quercus lobata HOM05D006969 ORTHO05D008826 2.7e-23 113.2 141 51.8
PSO339G3220 Papaver somniferum HOM05D006969 ORTHO05D008826 4.6e-23 112.5 172 45.9
PGSC0003DMG400027666 Solanum tuberosum HOM05D006969 ORTHO05D008826 4.6e-23 112.5 144 49.3
FvH4_6g09670 Fragaria vesca HOM05D006969 ORTHO05D008826 7.9e-23 111.7 156 46.2
FAN09G3593 Fragaria x ananassa HOM05D006969 ORTHO05D008826 7.9e-23 111.7 156 45.5
FAN14G4271 Fragaria x ananassa HOM05D006969 ORTHO05D008826 7.9e-23 111.7 156 46.2
FAN02G3877 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.3e-22 110.9 155 46.5
PSO384G0233 Papaver somniferum HOM05D006969 ORTHO05D008826 1.3e-22 110.9 172 45.3
Medtr7g073500 Medicago truncatula HOM05D006969 ORTHO05D008826 1.8e-22 110.5 169 42.6
Hund19755 Selenicereus undatus HOM05D006969 ORTHO05D008826 1.8e-22 110.5 158 45.6
Glyma.18G213000 Glycine max HOM05D006969 ORTHO05D008826 5.1e-22 109.0 159 43.4
Nitab4.5_0002758g0050 Nicotiana tabacum HOM05D006969 ORTHO05D008826 5.1e-22 109.0 137 52.6
Phvul.008G081600 Phaseolus vulgaris HOM05D006969 ORTHO05D008826 5.1e-22 109.0 181 40.9
AUR62006430 Chenopodium quinoa HOM05D006969 ORTHO05D008826 6.7e-22 108.6 156 51.3
Gorai.011G124600 Gossypium raimondii HOM05D006969 ORTHO05D008826 1.5e-21 107.5 159 48.4
Duzib151G0817 Durio zibethinus HOM05D006969 ORTHO05D008826 1.9e-21 107.1 136 50.0
Gohir.A10G153400 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.9e-21 107.1 157 48.4
Gohir.D10G112800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.9e-21 107.1 190 44.7
MSTRG.18936 Avicennia marina HOM05D006969 ORTHO05D008826 2.5e-21 106.7 156 46.8
AUR62029780 Chenopodium quinoa HOM05D006969 ORTHO05D008826 3.3e-21 106.3 159 47.8
VMungo1383G3295 Vigna mungo HOM05D006969 ORTHO05D008826 4.3e-21 105.9 172 40.7
Ciclev10013711m.g Citrus clementina HOM05D006969 ORTHO05D008826 3.7e-20 102.8 175 45.1
HanXRQChr01g0000581 Helianthus annuus HOM05D006969 ORTHO05D008826 4.8e-20 102.4 183 42.1
Lsat_1_v5_gn_5_152061 Lactuca sativa HOM05D006969 ORTHO05D008826 4.8e-20 102.4 194 41.8
Thecc.04G150100 Theobroma cacao HOM05D006969 ORTHO05D008826 6.3e-20 102.1 190 41.1
Ah.15g089930 Amaranthus hybridus HOM05D006969 ORTHO05D008826 1.4e-19 100.9 152 46.1
Lj1g0009458 Lotus japonicus HOM05D006969 ORTHO05D008826 3.1e-19 99.8 163 41.1
Nitab4.5_0000430g0190 Nicotiana tabacum HOM05D006969 ORTHO05D008826 4.1e-19 99.4 137 50.4
Thhalv10015463m.g Eutrema salsugineum HOM05D006969 ORTHO05D008826 6.9e-19 98.6 138 46.4
Nitab4.5_0000048g0110 Nicotiana tabacum HOM05D006969 ORTHO05D008826 6.9e-19 98.6 138 49.3
Atru.chr8.92 Acer truncatum HOM05D006969 ORTHO05D008826 1.5e-18 97.4 156 42.9
COL.COLO4_03930 Corchorus olitorius HOM05D006969 ORTHO05D008826 5.9e-18 95.5 176 39.8
Peaxi162Scf00732g00235 Petunia axillaris HOM05D006969 ORTHO05D008826 7.7e-18 95.1 128 50.8
EL10Ac7g17114 Beta vulgaris HOM05D006969 ORTHO05D008826 1.0e-17 94.7 163 42.9
Gorai.005G003600 Gossypium raimondii HOM05D006969 ORTHO05D008826 1.7e-17 94.0 167 39.5
Aa31LG5G11450 Aethionema arabicum HOM05D006969 ORTHO05D008826 2.2e-17 93.6 139 46.8
Gohir.D02G003100 Gossypium hirsutum HOM05D006969 ORTHO05D008826 2.9e-17 93.2 144 43.1
TWI77G0392 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 3.8e-17 92.8 91 58.2
Oeu038184.1 Olea europaea HOM05D006969 ORTHO05D008826 5.0e-17 92.4 143 42.7
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea HOM05D006969 ORTHO05D008826 6.5e-17 92.0 175 40.6
Migut.J00029 Erythranthe guttata HOM05D006969 ORTHO05D008826 6.5e-17 92.0 90 57.8
THA.LOC104823322 Tarenaya hassleriana HOM05D006969 ORTHO05D008826 6.5e-17 92.0 132 47.0
unitig_22.g6613 Utricularia gibba HOM05D006969 ORTHO05D008826 6.5e-17 92.0 158 42.4
BraA03t09395Z Brassica rapa HOM05D006969 ORTHO05D008826 8.5e-17 91.7 144 45.1
BcaB01g06123 Brassica carinata HOM05D006969 ORTHO05D008826 1.1e-16 91.3 142 46.5
BolC3t12589H Brassica oleracea HOM05D006969 ORTHO05D008826 1.1e-16 91.3 142 46.5
CDE06G1555 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 1.1e-16 91.3 153 37.9
AT5G01910 Arabidopsis thaliana HOM05D006969 ORTHO05D008826 1.4e-16 90.9 140 45.7
Nn5g26829 Nelumbo nucifera HOM05D006969 ORTHO05D008826 1.9e-16 90.5 131 46.6
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea HOM05D006969 ORTHO05D008826 4.2e-16 89.4 162 42.0
Lalb_Chr01g0023811 Lupinus albus HOM05D006969 ORTHO05D008826 4.2e-16 89.4 150 40.0
Gohir.A02G002800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 7.2e-16 88.6 171 37.4
TPR.G24295 Trifolium pratense HOM05D006969 ORTHO05D008826 9.4e-16 88.2 115 45.2
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 1.2e-15 87.8 150 37.3
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea HOM05D006969 ORTHO05D008826 7.9e-15 85.1 163 39.3
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 2.3e-14 83.6 167 40.1
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.3e-14 83.6 167 40.1
BcaB01g04376 Brassica carinata HOM05D006969 ORTHO05D008826 2.3e-14 83.6 144 40.3
AL6G10120 Arabidopsis lyrata HOM05D006969 ORTHO05D008826 3.0e-14 83.2 162 40.7
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea HOM05D006969 ORTHO05D008826 3.0e-14 83.2 158 39.9
A03p00060 Brassica napus HOM05D006969 ORTHO05D008826 3.0e-14 83.2 178 38.8
Carub.0024s0013 Capsella rubella HOM05D006969 ORTHO05D008826 3.0e-14 83.2 137 42.3
Sp6g41160 Schrenkiella parvula HOM05D006969 ORTHO05D008826 3.0e-14 83.2 157 41.4
SalBow7G4609 Salvia bowleyana HOM05D006969 ORTHO05D008826 8.8e-14 81.6 110 45.5
C03p00200 Brassica napus HOM05D006969 ORTHO05D008826 1.1e-13 81.3 135 43.7
DCAR_023968 Daucus carota HOM05D006969 ORTHO05D008826 2.6e-13 80.1 90 51.1
CARHR212260 Cardamine hirsuta HOM05D006969 ORTHO05D008826 4.8e-12 75.9 134 39.6
MBI03_g05807_MAGBIO Magnolia biondii HOM05D006969 ORTHO05D008826 4.8e-12 75.9 127 40.2
vmacro08947 Vaccinium macrocarpon HOM05D000266 ORTHO05D008826 8.2e-12 75.1 67 62.7
Rhsim04G0114700 Rhododendron simsii HOM05D006969 ORTHO05D008826 3.1e-11 73.2 77 51.9
Nitab4.5_0002655g0130 Nicotiana tabacum HOM05D006969 ORTHO05D008826 4.1e-11 72.8 106 41.5
Rhsim08G0240100 Rhododendron simsii HOM05D006969 ORTHO05D008826 1.5e-10 70.9 87 51.7
Rhsim03G0028100 Rhododendron simsii HOM05D006969 ORTHO05D008826 3.4e-10 69.7 87 49.4
HPP92_022865 Vanilla planifolia HOM05D006969 ORTHO05D008826 5.9e-10 68.9 162 37.0
Oeu060427.1 Olea europaea HOM05D006969 ORTHO05D008826 8.5e-09 65.1 69 55.1
unitig_8.g3270 Utricularia gibba HOM05D006969 ORTHO05D008826 2.5e-08 63.5 83 50.6


User provided reference genes

Program Settings