Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 5.9e-129 464.2 227 100.0
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 3.3e-79 298.9 243 61.7
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 1.5e-76 290.0 243 62.6
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 1.2e-73 280.4 242 58.3
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 1.6e-73 280.0 243 59.3
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 2.1e-73 279.6 242 57.9
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 1.8e-72 276.6 237 58.6
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 1.8e-72 276.6 243 57.6
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 2.4e-69 266.2 243 56.0
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 1.0e-67 260.8 241 55.6
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 3.2e-66 255.8 242 56.2
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 5.5e-66 255.0 242 53.7
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 5.5e-66 255.0 243 54.7
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 6.1e-65 251.5 240 54.2
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 7.9e-65 251.1 243 55.1
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 1.0e-64 250.8 240 54.2
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 4.3e-63 245.4 240 53.3
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 4.8e-62 241.9 240 52.5
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 4.8e-62 241.9 243 51.4
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 6.3e-62 241.5 245 52.2
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 6.9e-61 238.0 240 52.1
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 6.9e-61 238.0 243 53.1
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 4.5e-60 235.3 240 52.1
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 5.9e-60 235.0 240 51.7
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 5.9e-60 235.0 241 48.5
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 7.7e-60 234.6 245 51.0
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 1.0e-59 234.2 242 49.6
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 1.7e-59 233.4 247 48.6
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 1.7e-59 233.4 243 51.4
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 2.9e-59 232.6 245 52.2
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 8.5e-59 231.1 243 49.8
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 1.9e-58 229.9 243 51.4
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 1.9e-58 229.9 243 51.4
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 1.6e-57 226.9 243 50.2
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 1.6e-57 226.9 240 47.9
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 2.7e-57 226.1 243 48.6
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 2.7e-57 226.1 243 52.3
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 2.7e-57 226.1 243 52.3
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 3.6e-57 225.7 243 49.4
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 3.6e-57 225.7 243 51.9
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 4.6e-57 225.3 247 46.6
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 1.8e-56 223.4 239 49.0
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 2.3e-56 223.0 242 47.9
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 3.0e-56 222.6 245 49.8
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 3.0e-56 222.6 239 49.4
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 3.9e-56 222.2 242 47.1
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 8.8e-56 221.1 242 47.9
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 4.3e-55 218.8 244 48.8
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 4.3e-55 218.8 244 45.9
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 5.7e-55 218.4 242 47.9
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 9.7e-55 217.6 245 45.7
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 1.3e-54 217.2 243 47.3
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 2.2e-54 216.5 242 46.3
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 2.8e-54 216.1 242 46.3
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 3.7e-54 215.7 240 47.1
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 4.8e-54 215.3 238 50.4
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 6.3e-54 214.9 243 47.3
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 6.3e-54 214.9 238 47.9
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 6.3e-54 214.9 242 45.9
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 1.1e-53 214.2 215 50.2
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.8e-53 213.4 242 47.9
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 4.1e-53 212.2 239 46.4
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 4.1e-53 212.2 200 56.0
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 4.1e-53 212.2 242 47.9
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 6.9e-53 211.5 168 62.5
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 6.9e-53 211.5 246 47.6
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 1.2e-52 210.7 238 47.1
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 2.6e-52 209.5 222 50.9
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 1.7e-51 206.8 236 47.9
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 1.9e-50 203.4 265 44.2
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 1.9e-50 203.4 236 45.8
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 3.2e-50 202.6 188 58.0
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 1.6e-49 200.3 242 45.0
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 2.7e-49 199.5 246 47.6
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 4.7e-49 198.7 292 38.4
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 6.7e-48 194.9 171 59.6
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 4.8e-46 188.7 241 43.6
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 1.1e-45 187.6 199 47.7
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.4e-45 187.2 236 44.5
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 2.2e-43 179.9 205 48.3
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 1.1e-39 167.5 248 41.5
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 1.1e-37 161.0 184 47.3
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 1.1e-37 161.0 248 40.7
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 4.1e-37 159.1 176 48.9
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 2.0e-36 156.8 246 39.0
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 2.6e-36 156.4 236 38.6
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 5.9e-36 155.2 160 47.5
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 1.1e-34 151.0 246 38.2
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 1.5e-34 150.6 246 37.8
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 2.5e-34 149.8 175 48.0
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 9.4e-34 147.9 251 37.1
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 6.1e-33 145.2 237 36.7
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 8.8e-32 141.4 202 40.6
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 1.5e-31 140.6 241 36.5
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 8.5e-27 124.8 256 32.4
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.1e-26 124.4 233 33.9
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 3.7e-22 109.4 233 33.5
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 1.5e-15 87.4 95 49.5
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 1.5e-10 70.9 70 45.7
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 6.8e-08 62.0 71 45.1
Ah.10g032600 Amaranthus hybridus HOM05D007471 ORTHO05D009481 1.7e-06 57.4 102 34.3
Lsat_1_v5_gn_3_93600 Lactuca sativa HOM05D007471 ORTHO05D233800 2.2e-06 57.0 105 37.1
MBI14_g37361_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 2.2e-06 57.0 44 56.8


User provided reference genes

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