Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 0.0e+00 1990.7 1014 100.0
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 1.9e-198 697.2 1317 38.9
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 4.3e-195 686.0 1001 43.9
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 2.8e-194 683.3 1001 43.9
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 5.8e-192 675.6 1275 37.8
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 1.7e-191 674.1 1270 38.4
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 7.8e-189 665.2 1336 37.1
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 9.0e-185 651.7 1303 35.5
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 1.3e-178 631.3 1260 37.1
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 1.5e-176 624.4 1280 36.7
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 2.6e-176 623.6 1284 35.4
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 9.9e-176 621.7 1236 37.1
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 9.3e-174 615.1 1273 35.7
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 9.0e-169 598.6 1299 36.1
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 7.6e-168 595.5 1305 34.2
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 1.1e-166 591.7 1250 36.2
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 1.2e-165 588.2 1265 35.8
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 4.6e-165 586.3 1225 35.8
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 4.6e-165 586.3 1284 35.8
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.3e-164 583.9 1225 35.9
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 3.0e-164 583.6 1140 37.2
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 3.9e-164 583.2 1244 35.9
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 3.9e-164 583.2 1290 35.6
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.5e-163 580.5 1228 35.7
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 3.1e-161 573.5 1229 35.9
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 3.8e-151 540.0 1285 34.7
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 1.4e-150 538.1 1236 33.9
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 7.9e-149 532.3 1141 36.3
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.4e-148 531.6 1252 34.6
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 5.1e-148 529.6 1249 34.2
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 1.1e-147 528.5 1275 34.0
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 7.7e-144 515.8 540 53.5
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 1.0e-143 515.4 1238 33.6
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 3.8e-143 513.5 1200 36.0
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 9.7e-139 498.8 1043 37.1
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 1.1e-129 468.8 1233 30.9
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 1.9e-126 458.0 1251 33.1
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 1.2e-125 455.3 1201 32.9
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 2.7e-125 454.1 1068 34.8
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 2.7e-125 454.1 1068 34.8
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 2.0e-123 448.0 1226 31.9
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 2.6e-123 447.6 1135 32.6
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 2.2e-122 444.5 1213 31.3
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 1.4e-121 441.8 1257 31.7
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 5.9e-120 436.4 1232 30.4
Gohir.D08G059000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.7e-119 434.9 507 50.7
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 1.7e-119 434.9 1257 31.4
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 5.0e-119 433.3 1236 31.3
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 2.5e-118 431.0 1049 33.7
Gorai.004G060900 Gossypium raimondii HOM05D005171 ORTHO05D006343 1.6e-117 428.3 463 52.3
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 3.0e-116 424.1 1110 34.1
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 5.7e-115 419.9 1215 30.8
SalBow7G0294 Salvia bowleyana HOM05D005171 ORTHO05D006343 9.8e-115 419.1 1131 31.6
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 8.3e-114 416.0 1220 30.1
TAR627G0484 Trochodendron aralioides HOM05D005171 ORTHO05D006343 1.4e-113 415.2 342 62.9
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 2.3e-111 407.9 1192 30.8
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 2.9e-111 407.5 1233 30.3
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 1.1e-110 405.6 1028 34.3
Gohir.A11G147500 Gossypium hirsutum HOM05D005171 ORTHO05D006343 9.5e-110 402.5 1145 31.9
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 1.6e-109 401.7 1036 34.3
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 1.0e-108 399.1 1114 31.7
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 1.8e-108 398.3 1151 31.7
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 4.0e-108 397.1 1140 31.5
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.7e-106 391.7 1004 34.0
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 1.1e-105 389.0 1004 35.1
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 2.4e-105 387.9 620 40.3
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 9.2e-105 386.0 1018 32.2
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 4.6e-104 383.6 1230 30.1
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 8.6e-103 379.4 1276 30.0
Eucgr.A01375 Eucalyptus grandis HOM05D005171 ORTHO05D006343 4.3e-102 377.1 489 45.2
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 4.7e-101 373.6 1179 29.9
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 3.4e-99 367.5 463 47.7
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 3.4e-99 367.5 1023 31.2
CiPaw.03G284100 Carya illinoinensis HOM05D005171 ORTHO05D006343 4.4e-99 367.1 435 50.1
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 4.6e-96 357.1 1053 30.3
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 1.5e-94 352.1 542 42.6
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 9.5e-94 349.4 1023 32.5
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.2e-93 349.0 527 42.9
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 1.6e-93 348.6 1011 30.2
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 3.1e-92 344.4 1015 30.0
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 6.8e-92 343.2 1023 29.9
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 2.6e-91 341.3 941 33.5
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 3.4e-91 340.9 1201 29.1
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 5.8e-91 340.1 1011 29.6
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 5.8e-91 340.1 1011 29.6
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 3.7e-90 337.4 1018 29.8
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 1.4e-89 335.5 935 32.3
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 2.1e-88 331.6 965 31.8
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 3.5e-88 330.9 565 40.5
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 1.3e-87 328.9 492 42.5
PSO017G5154 Papaver somniferum HOM05D005171 ORTHO05D006343 5.1e-87 327.0 1162 29.7
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 1.1e-84 319.3 486 43.0
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 2.0e-83 315.1 1125 28.9
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 1.3e-82 312.4 1122 28.4
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 1.7e-82 312.0 1234 27.6
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 4.9e-82 310.5 1255 27.1
AUR62018228 Chenopodium quinoa HOM05D005171 ORTHO05D006343 1.4e-81 308.9 1248 26.7
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 3.2e-81 307.8 841 31.4
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 2.6e-75 288.1 1139 28.0
Hma1.2p1_0629F.1_g192130 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 4.6e-72 277.3 283 55.8
Gohir.A08G049000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 3.0e-71 274.6 347 47.0
ECA240G4228 Erigeron canadensis HOM05D005171 ORTHO05D006343 4.0e-68 264.2 410 40.2
MBI14_g33664_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 1.5e-62 245.7 274 49.3
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 2.5e-62 245.0 1126 26.7
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 1.3e-61 242.7 415 39.3
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 1.6e-61 242.3 1198 25.9
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 2.8e-61 241.5 1274 24.6
PSO478G2888 Papaver somniferum HOM05D005171 ORTHO05D006343 1.8e-60 238.8 313 43.8
HPP92_000125 Vanilla planifolia HOM05D005171 ORTHO05D006343 4.0e-60 237.7 1061 25.2
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 5.8e-59 233.8 1018 27.0
Dinv21324 Davidia involucrata HOM05D005171 ORTHO05D006343 6.1e-48 197.2 161 62.7
Duzib211G0583 Durio zibethinus HOM05D005171 ORTHO05D006343 7.9e-40 170.2 146 57.5
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 3.4e-35 154.8 190 52.1
PSO675G6191 Papaver somniferum HOM05D005171 ORTHO05D006343 7.4e-30 137.1 131 58.8
TPR.G30970 Trifolium pratense HOM05D005171 ORTHO05D006343 2.2e-26 125.6 150 43.3
TPR.G27424 Trifolium pratense HOM05D005171 ORTHO05D006343 1.5e-25 122.9 161 50.3
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea HOM05D005171 ORTHO05D006343 7.2e-25 120.6 251 38.6
PGSC0003DMG400017412 Solanum tuberosum HOM05D005171 ORTHO05D006343 2.7e-24 118.6 124 52.4
Actinidia12355 Actinidia chinensis HOM05D005171 ORTHO05D006343 3.6e-24 118.2 450 29.8
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 6.5e-18 97.4 258 33.3
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 2.5e-17 95.5 167 38.3
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 1.0e-15 90.1 80 58.8
Glyma.20G061000 Glycine max HOM05D005171 ORTHO05D006343 1.8e-15 89.4 135 46.7
PSO478G0307 Papaver somniferum HOM05D005171 ORTHO05D006343 3.0e-15 88.6 296 29.4
CANSAT11G0838 Cannabis sativa HOM05D005171 ORTHO05D006343 4.0e-15 88.2 86 55.8
MD09G1132400 Malus domestica HOM05D005171 ORTHO05D006343 2.0e-14 85.9 160 36.9
SEGI_15711 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 1.1e-12 80.1 120 39.2
ECA240G0272 Erigeron canadensis HOM05D004103 ORTHO05D005242 9.1e-12 77.0 144 41.7
CDE02G3322 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 3.5e-11 75.1 122 41.8
Os06g0608100 Oryza sativa ssp. japonica HOM05D005171 ORTHO05D006343 5.9e-11 74.3 246 29.3
SEGI_34464 Sequoiadendron giganteum HOM05D005171 ORTHO05D030606 6.5e-10 70.9 156 26.9
MD09G1132300 Malus domestica HOM05D005171 ORTHO05D006343 1.9e-09 69.3 177 31.1
SEGI_11604 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 1.8e-07 62.8 105 39.0


User provided reference genes

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