Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 2.6e-186 655.2 328 100.0
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 5.0e-137 491.5 339 72.0
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 3.7e-132 475.3 337 70.0
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 6.4e-132 474.6 343 71.4
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.4e-131 473.4 333 70.6
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 5.9e-130 468.0 348 67.5
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 3.0e-129 465.7 339 68.1
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 3.6e-127 458.8 342 67.8
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 6.2e-127 458.0 344 67.4
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 8.0e-127 457.6 337 69.1
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 3.1e-126 455.7 339 68.1
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 6.8e-126 454.5 341 68.0
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 4.4e-125 451.8 351 66.1
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 4.4e-125 451.8 366 65.6
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 4.4e-125 451.8 337 68.2
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 9.8e-125 450.7 337 68.5
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 1.3e-124 450.3 338 68.0
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 6.4e-124 448.0 343 65.0
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 1.2e-122 443.7 344 65.4
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 1.0e-121 440.7 339 66.4
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.7e-121 439.9 350 63.4
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 5.0e-121 438.3 341 65.7
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.2e-119 433.7 341 68.0
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.6e-119 433.3 344 65.7
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 3.6e-119 432.2 326 66.0
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 6.2e-119 431.4 348 62.6
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 2.3e-118 429.5 336 66.1
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 3.1e-118 429.1 396 60.9
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 2.6e-117 426.0 339 63.1
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 2.4e-115 419.5 350 62.0
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 4.1e-115 418.7 338 63.3
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 5.4e-115 418.3 350 61.4
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 7.8e-114 414.5 334 64.4
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 7.8e-114 414.5 332 61.7
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 1.0e-113 414.1 337 62.6
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 1.1e-112 410.6 339 62.5
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 1.5e-112 410.2 334 65.0
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 4.3e-112 408.7 337 64.1
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 7.3e-112 407.9 328 64.3
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 2.8e-111 406.0 248 75.8
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 3.6e-111 405.6 337 63.2
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 6.2e-111 404.8 349 61.0
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 8.1e-111 404.4 333 61.3
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 2.3e-110 402.9 348 58.3
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.0e-110 402.1 350 60.9
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 5.2e-110 401.7 343 60.6
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 6.8e-110 401.4 248 75.0
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 1.2e-109 400.6 275 70.5
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 4.4e-109 398.7 332 62.0
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 2.2e-108 396.4 332 63.0
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 2.9e-108 396.0 347 61.4
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 3.7e-108 395.6 338 62.1
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 8.4e-108 394.4 288 67.4
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 1.4e-107 393.7 340 58.8
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 1.9e-107 393.3 328 59.5
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 4.1e-107 392.1 229 80.8
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 7.1e-107 391.3 333 58.6
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 7.1e-107 391.3 333 58.6
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 1.2e-106 390.6 333 58.6
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 1.2e-106 390.6 338 58.6
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.1e-106 389.8 328 58.5
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 2.1e-106 389.8 291 67.4
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 2.7e-106 389.4 341 58.4
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 3.5e-106 389.0 342 57.9
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 1.0e-105 387.5 339 59.6
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 1.7e-105 386.7 333 60.7
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 3.9e-105 385.6 324 60.8
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 3.9e-105 385.6 325 59.4
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 6.6e-105 384.8 338 58.0
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 6.6e-105 384.8 427 52.9
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 1.5e-104 383.6 327 64.2
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 1.6e-103 380.2 338 58.3
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.6e-103 379.0 357 58.0
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.6e-103 379.0 357 58.0
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 1.4e-102 377.1 342 61.1
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 5.2e-102 375.2 333 57.4
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 2.6e-101 372.9 341 57.8
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.3e-100 370.5 237 70.0
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 6.4e-100 368.2 277 66.1
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 7.8e-98 361.3 217 77.4
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 2.3e-97 359.8 352 56.0
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 8.7e-97 357.8 320 57.8
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 4.3e-96 355.5 221 73.8
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 5.6e-96 355.1 210 78.6
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 7.3e-96 354.8 262 64.5
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 1.6e-87 327.0 252 64.3
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 9.0e-86 321.2 198 74.7
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 8.4e-84 314.7 315 51.4
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 7.1e-83 311.6 343 51.6
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 6.0e-82 308.5 174 81.0
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 8.1e-79 298.1 275 57.1
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 1.4e-78 297.4 239 65.7
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 2.6e-77 293.1 277 56.0
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 1.3e-73 280.8 233 55.4
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 5.1e-73 278.9 236 61.4
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 1.1e-72 277.7 269 56.9
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 4.8e-71 272.3 221 57.0
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 5.3e-70 268.9 292 50.0
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 3.4e-69 266.2 232 60.3
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 5.9e-69 265.4 259 57.9
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 1.0e-68 264.6 228 61.0
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.7e-68 263.8 221 54.3
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 6.5e-68 261.9 221 57.0
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 2.7e-50 203.4 256 41.8
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 2.1e-42 177.2 209 40.2
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.1e-42 177.2 108 77.8
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.0e-41 172.9 108 76.9
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.7e-36 157.5 195 45.1
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 2.0e-32 144.1 97 67.0
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 2.8e-31 140.2 113 61.9
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 9.2e-22 108.6 167 40.7
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 3.8e-20 103.2 129 49.6
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 2.4e-14 84.0 50 80.0
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 4.1e-14 83.2 217 31.8
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 1.3e-12 78.2 47 72.3
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 2.4e-06 57.4 76 36.8
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 3.2e-06 57.0 133 35.3
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 7.0e-06 55.8 133 35.3


User provided reference genes

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