Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 6.5e-108 394.0 196 100.0
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.3e-89 332.4 194 84.0
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 3.0e-89 332.0 194 83.0
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 1.7e-87 326.2 193 81.3
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 2.8e-87 325.5 193 80.8
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 1.8e-86 322.8 190 82.6
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 1.8e-86 322.8 196 80.1
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 3.1e-86 322.0 194 79.4
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 5.4e-86 321.2 196 79.1
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 1.3e-84 316.6 194 80.9
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 1.7e-84 316.2 188 83.0
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 9.5e-83 310.5 190 78.4
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 9.5e-83 310.5 194 76.8
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 1.6e-82 309.7 194 76.8
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 4.7e-82 308.1 194 76.8
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 6.1e-82 307.8 190 77.9
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 6.1e-82 307.8 193 78.8
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 8.0e-82 307.4 190 77.9
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 8.0e-82 307.4 185 80.0
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 1.4e-81 306.6 194 77.8
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.8e-81 306.2 194 76.8
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 2.3e-81 305.8 194 76.3
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 3.0e-81 305.4 190 77.4
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 8.9e-81 303.9 194 76.3
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 2.0e-80 302.8 194 74.2
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 3.4e-80 302.0 194 75.8
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 4.4e-80 301.6 194 75.3
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 4.4e-80 301.6 194 76.3
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 5.8e-80 301.2 194 75.3
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 9.8e-80 300.4 192 77.1
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 1.7e-79 299.7 194 74.7
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 2.9e-79 298.9 194 74.2
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 2.9e-79 298.9 190 74.2
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 2.9e-79 298.9 194 74.2
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 4.9e-79 298.1 194 74.2
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 1.4e-78 296.6 189 76.2
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 2.4e-78 295.8 190 75.8
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 4.1e-78 295.0 193 72.5
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 5.4e-78 294.7 194 71.1
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 7.0e-78 294.3 194 74.2
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 9.2e-78 293.9 196 74.0
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 7.8e-77 290.8 194 71.1
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 7.8e-77 290.8 198 72.2
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 1.3e-76 290.0 194 72.2
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 1.7e-76 289.7 180 78.3
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 2.3e-76 289.3 194 70.6
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 3.0e-76 288.9 194 69.6
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 3.0e-76 288.9 194 70.1
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 3.0e-76 288.9 167 82.6
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 3.9e-76 288.5 194 70.1
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 5.0e-76 288.1 193 71.0
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 3.3e-75 285.4 194 71.6
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 9.5e-75 283.9 190 71.6
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.2e-74 283.5 190 71.6
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 3.6e-74 282.0 189 72.0
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 6.2e-74 281.2 190 70.5
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.1e-73 280.4 190 72.6
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 1.1e-73 280.4 194 69.1
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 2.3e-73 279.3 190 73.7
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 6.8e-73 277.7 190 73.7
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 1.2e-72 276.9 180 75.0
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 1.5e-72 276.6 190 70.0
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 2.6e-72 275.8 168 82.1
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 2.6e-72 275.8 190 68.9
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.3e-71 273.5 255 57.3
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 2.2e-71 272.7 175 74.3
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 2.9e-71 272.3 171 75.4
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 1.1e-70 270.4 194 69.1
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 2.4e-70 269.2 185 72.4
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 9.2e-70 267.3 190 66.8
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 1.1e-67 260.4 184 71.2
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.9e-67 259.6 196 69.4
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 3.3e-67 258.8 264 55.7
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 8.1e-66 254.2 342 44.7
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 1.8e-65 253.1 176 69.9
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 2.3e-65 252.7 143 83.9
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 2.0e-64 249.6 152 77.6
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 7.5e-64 247.7 150 79.3
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 9.9e-64 247.3 194 66.0
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 1.1e-62 243.8 170 72.9
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.1e-59 233.8 316 43.0
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.1e-59 233.8 316 43.0
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 9.5e-59 230.7 150 71.3
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 9.9e-56 220.7 166 67.5
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 2.1e-53 213.0 137 75.2
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 3.5e-53 212.2 135 74.8
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.3e-52 210.3 190 57.9
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 2.3e-52 209.5 171 57.9
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 9.6e-51 204.1 134 73.1
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 6.2e-50 201.4 169 56.8
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 9.3e-46 187.6 190 54.2
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 1.9e-43 179.9 108 75.9
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 1.4e-41 173.7 131 66.4
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 6.9e-41 171.4 121 68.6
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 2.6e-40 169.5 233 48.9
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 5.4e-38 161.8 171 50.3
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 2.1e-34 149.8 293 33.1
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 9.3e-30 134.4 110 62.7
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.2e-29 134.0 83 79.5
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.1e-29 133.3 87 75.9
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 1.5e-27 127.1 80 68.8
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 3.5e-21 105.9 71 76.1
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 2.4e-17 93.2 164 36.6
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 6.9e-17 91.7 129 41.9
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 2.6e-16 89.7 111 44.1
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 2.5e-14 83.2 55 74.5
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 3.9e-12 75.9 99 47.5
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 1.5e-11 73.9 49 73.5
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-07 60.5 34 79.4
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.7e-07 60.5 41 63.4


User provided reference genes

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