Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 7.1e-139 497.3 256 100.0
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 1.0e-108 397.1 256 75.0
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 1.7e-108 396.4 256 77.7
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 2.9e-108 395.6 256 74.6
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 1.2e-106 390.2 256 76.6
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 4.0e-105 385.2 256 74.6
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 4.0e-105 385.2 255 75.3
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 6.7e-105 384.4 257 73.5
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 3.3e-104 382.1 256 75.4
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 3.3e-104 382.1 256 71.5
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 1.7e-103 379.8 256 72.3
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 2.2e-103 379.4 256 75.0
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 3.7e-103 378.6 258 70.9
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 4.8e-103 378.3 257 73.2
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 6.3e-103 377.9 256 72.3
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 8.2e-103 377.5 256 73.0
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 2.4e-102 375.9 256 72.7
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 2.4e-102 375.9 256 70.7
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 2.4e-102 375.9 256 72.7
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 7.0e-102 374.4 256 70.7
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 1.2e-101 373.6 256 71.1
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 7.7e-101 370.9 256 71.5
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 1.3e-100 370.2 256 69.9
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.9e-100 369.0 256 69.5
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 1.5e-99 366.7 256 69.9
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.5e-99 366.7 256 67.6
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 1.6e-98 363.2 258 69.0
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 1.4e-97 360.1 256 71.1
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 1.2e-96 357.1 256 68.4
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 2.0e-96 356.3 256 66.8
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 2.6e-96 355.9 256 66.4
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 7.5e-96 354.4 256 67.2
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 9.8e-96 354.0 256 67.6
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 2.2e-95 352.8 256 68.8
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 6.3e-95 351.3 256 66.8
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 1.8e-94 349.7 256 66.4
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 1.8e-94 349.7 256 67.6
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 2.4e-94 349.4 256 65.6
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 3.1e-94 349.0 256 66.0
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 4.1e-94 348.6 260 66.2
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 4.1e-94 348.6 257 66.9
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 7.0e-94 347.8 256 65.2
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 2.0e-93 346.3 259 65.6
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 2.0e-93 346.3 256 66.4
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 3.5e-93 345.5 256 67.2
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 3.5e-93 345.5 256 67.2
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 4.5e-93 345.1 256 64.5
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.5e-93 345.1 256 66.4
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.0e-92 344.0 256 66.8
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.3e-92 343.6 256 66.0
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.3e-92 343.6 256 66.4
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 6.6e-92 341.3 256 67.2
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.5e-91 340.1 256 66.0
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 1.9e-91 339.7 256 68.8
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 7.2e-91 337.8 256 63.3
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 7.2e-91 337.8 256 64.8
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 1.2e-90 337.0 256 64.8
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 2.1e-90 336.3 257 65.4
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 2.8e-90 335.9 255 67.8
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 3.6e-90 335.5 256 63.7
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 4.7e-90 335.1 257 65.4
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 4.7e-90 335.1 256 62.9
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 4.7e-90 335.1 256 63.7
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 4.7e-90 335.1 256 64.8
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 6.1e-90 334.7 256 62.5
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 6.1e-90 334.7 256 62.1
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 8.0e-90 334.3 256 64.5
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 1.0e-89 334.0 258 64.0
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 1.4e-89 333.6 256 65.2
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 2.3e-89 332.8 258 64.7
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 3.0e-89 332.4 256 63.3
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 3.0e-89 332.4 256 66.0
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 4.0e-89 332.0 256 62.1
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 5.2e-89 331.6 258 63.6
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 6.8e-89 331.3 302 57.6
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 8.9e-89 330.9 275 60.4
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 8.9e-89 330.9 256 64.1
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 2.6e-88 329.3 256 64.1
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 5.7e-88 328.2 261 62.1
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 2.2e-87 326.2 253 63.6
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 2.2e-87 326.2 258 60.9
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 3.7e-87 325.5 253 62.8
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 4.9e-87 325.1 256 63.3
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 4.9e-87 325.1 258 64.7
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 1.1e-86 323.9 258 61.6
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 1.8e-86 323.2 256 63.7
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 2.4e-86 322.8 235 68.9
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 2.4e-86 322.8 259 62.2
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 3.1e-86 322.4 256 60.9
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 4.1e-86 322.0 259 62.2
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 5.4e-86 321.6 256 62.1
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 7.8e-85 317.8 256 60.2
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 1.7e-84 316.6 258 62.0
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.7e-84 316.6 256 61.7
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 6.1e-82 308.1 257 63.4
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 6.1e-82 308.1 232 66.4
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 2.2e-79 299.7 225 66.7
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 8.3e-79 297.7 256 58.6
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 2.4e-78 296.2 256 58.6
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 2.0e-77 293.1 237 61.6
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 9.5e-75 284.3 202 68.3
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 2.7e-69 266.2 237 57.8
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 5.1e-68 261.9 193 69.4
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 1.9e-62 243.4 237 55.7
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 1.3e-47 194.1 162 60.5
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.3e-47 194.1 125 76.0
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 3.8e-39 166.0 136 59.6
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 8.2e-26 121.7 252 34.9
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 1.0e-20 104.8 76 67.1
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 3.3e-19 99.8 246 30.5
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 9.0e-17 91.7 177 36.7
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.8e-09 67.4 93 48.4
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 2.6e-08 63.5 254 28.3
Rhsim04G0063600 Rhododendron simsii HOM05D000001 ORTHO05D009825 3.2e-06 56.6 68 47.1


User provided reference genes

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