Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 1.4e-76 289.7 157 100.0
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 1.8e-36 156.4 165 57.6
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 2.0e-30 136.3 166 49.4
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 2.6e-30 136.0 159 54.7
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 2.6e-30 136.0 158 53.8
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 3.3e-30 135.6 163 51.5
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 9.7e-30 134.0 149 54.4
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 2.2e-29 132.9 160 51.2
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 1.8e-28 129.8 159 50.9
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.8e-28 129.8 155 56.8
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 1.6e-27 126.7 169 50.3
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 4.5e-27 125.2 156 54.5
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 4.5e-27 125.2 161 50.3
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 5.9e-27 124.8 163 49.1
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 1.0e-26 124.0 163 54.0
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.0e-26 124.0 167 48.5
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.0e-26 124.0 167 47.3
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 2.2e-26 122.9 161 50.3
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 2.9e-26 122.5 161 50.9
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 3.2e-25 119.0 163 53.4
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 3.2e-25 119.0 171 48.5
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 4.2e-25 118.6 162 51.2
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 5.5e-25 118.2 162 49.4
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 1.2e-24 117.1 167 46.7
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 1.6e-24 116.7 161 49.1
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 1.6e-24 116.7 161 49.1
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 4.7e-24 115.2 167 47.3
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 6.1e-24 114.8 158 48.7
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 1.8e-23 113.2 156 46.8
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.8e-23 113.2 157 45.9
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 2.3e-23 112.8 156 45.5
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.3e-23 112.8 157 45.9
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 4.0e-23 112.1 156 48.7
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 5.2e-23 111.7 154 47.4
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 5.2e-23 111.7 154 46.1
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 6.8e-23 111.3 154 45.5
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 1.2e-22 110.5 156 45.5
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 1.5e-22 110.2 169 49.1
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 2.0e-22 109.8 165 46.1
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.4e-22 109.0 169 44.4
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 9.8e-22 107.5 162 46.3
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 1.7e-21 106.7 167 45.5
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 2.8e-21 105.9 155 44.5
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 2.8e-21 105.9 168 41.7
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 4.8e-21 105.1 161 44.7
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 6.3e-21 104.8 162 43.8
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 8.3e-21 104.4 152 47.4
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 8.3e-21 104.4 156 46.2
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 1.4e-20 103.6 168 41.7
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.8e-20 103.2 168 41.7
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 2.4e-20 102.8 161 46.6
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 9.1e-20 100.9 149 45.0
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 1.2e-19 100.5 146 48.6
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 1.2e-19 100.5 165 44.8
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 1.6e-19 100.1 163 44.8
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 1.6e-19 100.1 158 45.6
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 1.6e-19 100.1 149 45.0
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.8e-18 95.5 149 44.3
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.1e-17 94.0 164 40.9
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 1.1e-17 94.0 164 43.9
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 1.5e-17 93.6 148 44.6
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.5e-17 93.6 144 45.1
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 2.5e-17 92.8 151 47.0
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 3.3e-17 92.4 148 44.6
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 4.2e-17 92.0 145 42.1
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 9.5e-17 90.9 161 42.2
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 9.5e-17 90.9 170 40.0
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 1.2e-16 90.5 146 44.5
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 1.2e-16 90.5 146 44.5
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 2.8e-16 89.4 143 43.4
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 2.8e-16 89.4 143 43.4
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 8.0e-16 87.8 146 43.2
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 8.0e-16 87.8 146 43.2
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 1.4e-15 87.0 150 40.7
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.8e-15 86.7 146 42.5
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 1.5e-14 83.6 150 41.3
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 7.5e-14 81.3 168 39.3
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 1.7e-13 80.1 152 43.4
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 2.2e-13 79.7 133 41.4
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 4.9e-13 78.6 131 41.2
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 5.4e-12 75.1 131 41.2
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 7.0e-12 74.7 148 42.6
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 2.0e-11 73.2 168 35.1
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 3.5e-11 72.4 154 40.3
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 1.7e-10 70.1 156 37.2
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 3.8e-10 68.9 146 38.4
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 5.0e-10 68.6 142 40.1
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 1.1e-09 67.4 142 40.1
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 3.3e-09 65.9 168 32.7
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 3.3e-09 65.9 139 40.3
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 7.3e-09 64.7 52 67.3
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 2.1e-08 63.2 148 35.8
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 8.0e-08 61.2 86 40.7
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 1.0e-07 60.8 151 35.1
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 2.3e-07 59.7 157 37.6
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 6.8e-07 58.2 157 33.8
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 8.9e-07 57.8 164 37.8
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 8.9e-07 57.8 146 33.6
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 2.6e-06 56.2 146 33.6
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 4.4e-06 55.5 114 42.1
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 5.8e-06 55.1 158 34.8


User provided reference genes

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