Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029888001 Vitis vinifera HOM05D000032 ORTHO05D048335 1.6e-22 108.6 56 100.0
Aqoxy3G03616 Aquilegia oxysepala HOM05D000032 ORTHO05D004142 6.6e-13 76.6 39 94.9
BcaC06g33185 Brassica carinata HOM05D000032 ORTHO05D004142 6.6e-13 76.6 39 94.9
BcaNung06899 Brassica carinata HOM05D000032 ORTHO05D004142 6.6e-13 76.6 39 94.9
A03p46700 Brassica napus HOM05D000032 ORTHO05D004142 6.6e-13 76.6 39 94.9
C07p44760 Brassica napus HOM05D000824 ORTHO05D003555 6.6e-13 76.6 39 94.9
BraA03t13793Z Brassica rapa HOM05D000032 ORTHO05D004142 6.6e-13 76.6 39 94.9
TAR629G1452 Trochodendron aralioides HOM05D000032 ORTHO05D004142 6.6e-13 76.6 39 94.9
CAN.G904.23 Capsicum annuum HOM05D000032 ORTHO05D004142 1.5e-12 75.5 39 92.3
Cc06_g21600 Coffea canephora HOM05D000032 ORTHO05D004142 1.5e-12 75.5 39 92.3
Eucgr.B01028 Eucalyptus grandis HOM05D000032 ORTHO05D004142 1.5e-12 75.5 39 92.3
Eucgr.D01365 Eucalyptus grandis HOM05D000032 ORTHO05D004142 1.5e-12 75.5 39 92.3
Gohir.A11G271500 Gossypium hirsutum HOM05D000032 ORTHO05D004142 1.5e-12 75.5 41 87.8
Hma1.2p1_0151F.1_g067330 Hydrangea macrophylla HOM05D000032 ORTHO05D004142 1.5e-12 75.5 41 90.2
PSO541G2507 Papaver somniferum HOM05D000032 ORTHO05D004142 1.5e-12 75.5 39 92.3
PSO675G1616 Papaver somniferum HOM05D000032 ORTHO05D004142 1.5e-12 75.5 39 92.3
Peaxi162Scf00263g00127 Petunia axillaris HOM05D000032 ORTHO05D004142 1.5e-12 75.5 39 92.3
Solyc10g007550.3 Solanum lycopersicum HOM05D000032 ORTHO05D004142 1.5e-12 75.5 39 92.3
Sopen10g003480 Solanum pennellii HOM05D000032 ORTHO05D004142 1.5e-12 75.5 39 92.3
DCAR_025912 Daucus carota HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 92.3
Duzib187G1618 Durio zibethinus HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
Duzib213G0383 Durio zibethinus HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
Gohir.A13G123500 Gossypium hirsutum HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
Gohir.D11G281700 Gossypium hirsutum HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
Gohir.D13G127400 Gossypium hirsutum HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
Gorai.007G304300 Gossypium raimondii HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
Gorai.013G142600 Gossypium raimondii HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
HanXRQChr10g0313341 Helianthus annuus HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 92.3
Manes.12G091802 Manihot esculenta HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
Manes.13G086300 Manihot esculenta HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
Manes.13G099900 Manihot esculenta HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
Thecc.07G171600 Theobroma cacao HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 89.7
GSVIVG01010258001 Vitis vinifera HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 92.3
GSVIVG01032335001 Vitis vinifera HOM05D000032 ORTHO05D004142 1.9e-12 75.1 39 92.3
Ciclev10004994m.g Citrus clementina HOM05D000032 ORTHO05D004142 3.3e-12 74.3 39 89.7
Migut.C00216 Erythranthe guttata HOM05D000032 ORTHO05D004142 3.3e-12 74.3 39 89.7
Migut.H00520 Erythranthe guttata HOM05D000032 ORTHO05D004142 3.3e-12 74.3 39 89.7
HanXRQChr10g0305921 Helianthus annuus HOM05D000032 ORTHO05D004142 4.3e-12 73.9 39 89.7
MD10G1206500 Malus domestica HOM05D000032 ORTHO05D004142 4.3e-12 73.9 39 89.7
AL8G37640 Arabidopsis lyrata HOM05D000032 ORTHO05D004142 5.6e-12 73.6 39 92.3
AT5G60990 Arabidopsis thaliana HOM05D000032 ORTHO05D004142 5.6e-12 73.6 39 92.3
BcaB07g34225 Brassica carinata HOM05D000032 ORTHO05D004142 5.6e-12 73.6 39 92.3
BcaC03g18070 Brassica carinata HOM05D000032 ORTHO05D004142 5.6e-12 73.6 39 92.3
A02p41340 Brassica napus HOM05D000032 ORTHO05D004142 5.6e-12 73.6 40 90.0
C02p61300 Brassica napus HOM05D000032 ORTHO05D004142 5.6e-12 73.6 39 92.3
BolC2t12177H Brassica oleracea HOM05D000032 ORTHO05D004142 5.6e-12 73.6 39 92.3
BraA02t09079Z Brassica rapa HOM05D000032 ORTHO05D004142 5.6e-12 73.6 39 92.3
Carub.0008s2168 Capsella rubella HOM05D000032 ORTHO05D004142 5.6e-12 73.6 39 92.3
Thhalv10004206m.g Eutrema salsugineum HOM05D000032 ORTHO05D004142 5.6e-12 73.6 39 92.3
Sp2g24300 Schrenkiella parvula HOM05D000032 ORTHO05D004142 5.6e-12 73.6 39 92.3
Atru.chr1.133 Acer truncatum HOM05D000032 ORTHO05D004142 7.3e-12 73.2 39 87.2
CSS0001974 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D004142 7.3e-12 73.2 39 92.3
CSS0011791 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D004142 7.3e-12 73.2 39 92.3
CSS0012553 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D004142 7.3e-12 73.2 39 92.3
CSS0013696 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D004142 7.3e-12 73.2 39 92.3
CARHR274700 Cardamine hirsuta HOM05D000032 ORTHO05D004142 7.3e-12 73.2 39 89.7
TWI74G0217 Tripterygium wilfordii HOM05D000032 ORTHO05D004142 7.3e-12 73.2 39 87.2
Ah.13g078090 Amaranthus hybridus HOM05D000032 ORTHO05D004142 9.5e-12 72.8 39 89.7
Manes.14G010605 Manihot esculenta HOM05D000032 ORTHO05D004142 9.5e-12 72.8 39 87.2
Nitab4.5_0013709g0010 Nicotiana tabacum HOM05D000032 ORTHO05D004142 9.5e-12 72.8 39 87.2
Nitab4.5_0021264g0010 Nicotiana tabacum HOM05D000032 ORTHO05D004142 9.5e-12 72.8 39 87.2
THA.LOC104826250 Tarenaya hassleriana HOM05D000032 ORTHO05D004142 9.5e-12 72.8 39 89.7
Aa31LG11G2290 Aethionema arabicum HOM05D000032 ORTHO05D004142 1.2e-11 72.4 39 89.7
Nn7g38146 Nelumbo nucifera HOM05D000032 ORTHO05D004142 1.2e-11 72.4 39 87.2
Potri.007G068800 Populus trichocarpa HOM05D000032 ORTHO05D004142 1.2e-11 72.4 39 87.2
QL02p034454 Quercus lobata HOM05D000032 ORTHO05D004142 1.2e-11 72.4 39 89.7
SGA_v2.0_scaffold15G07169 Striga asiatica HOM05D000032 ORTHO05D004142 1.2e-11 72.4 39 89.7
arahy.Tifrunner.gnm1.ann1.B0I1EQ Arachis hypogaea HOM05D000032 ORTHO05D004142 1.6e-11 72.0 40 85.0
ClCG01G000700 Citrullus lanatus HOM05D000032 ORTHO05D004142 1.6e-11 72.0 39 87.2
MELO3C005860.2 Cucumis melo HOM05D000032 ORTHO05D004142 1.6e-11 72.0 39 87.2
CsaV3_5G000800 Cucumis sativus L. HOM05D000032 ORTHO05D004142 1.6e-11 72.0 39 87.2
Sed0018876 Sechium edule HOM05D000032 ORTHO05D004142 1.6e-11 72.0 39 87.2
Actinidia35422 Actinidia chinensis HOM05D000032 ORTHO05D004142 2.1e-11 71.6 39 89.7
Lsat_1_v5_gn_5_106701 Lactuca sativa HOM05D000032 ORTHO05D004142 2.1e-11 71.6 39 87.2
Sabra07G0056300 Salix brachista HOM05D000032 ORTHO05D004142 2.1e-11 71.6 39 87.2
MSTRG.23816 Avicennia marina HOM05D000032 ORTHO05D004142 2.8e-11 71.2 39 87.2
CANSAT11G1253 Cannabis sativa HOM05D000032 ORTHO05D004142 2.8e-11 71.2 39 89.7
Ca_03627_v3 Cicer arietinum L. HOM05D000032 ORTHO05D004142 2.8e-11 71.2 39 87.2
Hma1.2p1_0453F.1_g156150 Hydrangea macrophylla HOM05D000032 ORTHO05D048335 2.8e-11 71.2 46 76.1
Oeu043850.1 Olea europaea HOM05D000032 ORTHO05D004142 2.8e-11 71.2 39 87.2
unitig_744.g24430 Utricularia gibba HOM05D000032 ORTHO05D004142 2.8e-11 71.2 39 84.6
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 3.6e-11 70.9 43 76.7
Nitab4.5_0007757g0010 Nicotiana tabacum HOM05D000032 ORTHO05D004142 3.6e-11 70.9 44 77.3
Prupe.4G135800 Prunus persica HOM05D000032 ORTHO05D004142 3.6e-11 70.9 39 84.6
arahy.Tifrunner.gnm1.ann1.CG2MQW Arachis hypogaea HOM05D000032 ORTHO05D004142 4.7e-11 70.5 39 84.6
DCAR_026479 Daucus carota HOM05D000032 ORTHO05D004142 4.7e-11 70.5 39 84.6
ECA232G0786 Erigeron canadensis HOM05D000032 ORTHO05D004142 4.7e-11 70.5 39 84.6
FAN21G3500 Fragaria x ananassa HOM05D000032 ORTHO05D004142 4.7e-11 70.5 39 84.6
Lj2g0002860 Lotus japonicus HOM05D000032 ORTHO05D004142 4.7e-11 70.5 39 84.6
VMungo0331G0926 Vigna mungo HOM05D000032 ORTHO05D004142 4.7e-11 70.5 39 84.6
EL10Ac4g09647 Beta vulgaris HOM05D000032 ORTHO05D004142 6.2e-11 70.1 39 82.1
EL10Ac4g09648 Beta vulgaris HOM05D000032 ORTHO05D004142 6.2e-11 70.1 39 82.1
ECA240G1301 Erigeron canadensis HOM05D000032 ORTHO05D004142 6.2e-11 70.1 37 89.2
Gohir.D11G026650 Gossypium hirsutum HOM05D000032 ORTHO05D004142 6.2e-11 70.1 51 74.5
Hund05345 Selenicereus undatus HOM05D000032 ORTHO05D004142 6.2e-11 70.1 39 87.2
Gohir.A11G027450 Gossypium hirsutum HOM05D000032 ORTHO05D004142 8.0e-11 69.7 51 74.5
Actinidia37128 Actinidia chinensis HOM05D000032 ORTHO05D004142 1.1e-10 69.3 39 87.2
COL.COLO4_32237 Corchorus olitorius HOM05D000032 ORTHO05D004142 1.1e-10 69.3 39 82.1
FvH4_3g15190 Fragaria vesca HOM05D000032 ORTHO05D004142 1.1e-10 69.3 39 82.1
FAN11G0859 Fragaria x ananassa HOM05D000032 ORTHO05D004142 1.1e-10 69.3 39 82.1
FAN16G1649 Fragaria x ananassa HOM05D000032 ORTHO05D004142 1.1e-10 69.3 39 82.1
Glyma.03G014900 Glycine max HOM05D000032 ORTHO05D004142 1.1e-10 69.3 39 82.1
Phvul.010G094200 Phaseolus vulgaris HOM05D000032 ORTHO05D004142 1.1e-10 69.3 39 82.1
Cpa.g.sc1004.1 Carica papaya HOM05D000032 ORTHO05D004142 1.4e-10 68.9 39 84.6
Lalb_Chr08g0241921 Lupinus albus HOM05D000032 ORTHO05D004142 1.4e-10 68.9 39 82.1
Phvul.004G074800 Phaseolus vulgaris HOM05D000032 ORTHO05D004142 1.4e-10 68.9 39 82.1
Sc18g0006790 Simmondsia chinensis HOM05D000032 ORTHO05D004142 1.4e-10 68.9 39 82.1
FAN25G2447 Fragaria x ananassa HOM05D000032 ORTHO05D004142 2.3e-10 68.2 39 79.5
RcHm_v2.0_Chr5g0025631 Rosa chinensis HOM05D000032 ORTHO05D004142 2.3e-10 68.2 39 79.5
THA.LOC104801169 Tarenaya hassleriana HOM05D000032 ORTHO05D004142 2.3e-10 68.2 39 82.1
PGR142G3026 Punica granatum HOM05D000032 ORTHO05D004142 3.1e-10 67.8 39 84.6
SEGI_35339 Sequoiadendron giganteum HOM05D000032 ORTHO05D004142 3.1e-10 67.8 41 78.0
HPP92_002272 Vanilla planifolia HOM05D000032 ORTHO05D004142 3.1e-10 67.8 39 82.1
Hma1.2p1_0042F.1_g025720 Hydrangea macrophylla HOM05D000032 ORTHO05D004142 4.0e-10 67.4 41 82.9
Medtr6g082080 Medicago truncatula HOM05D000032 ORTHO05D004142 4.0e-10 67.4 39 79.5
Medtr7g056830 Medicago truncatula HOM05D000032 ORTHO05D004142 4.0e-10 67.4 39 79.5
QL10p034134 Quercus lobata HOM05D000032 ORTHO05D004142 4.0e-10 67.4 39 82.1
EL10Ac4g09646 Beta vulgaris HOM05D000032 ORTHO05D004142 5.2e-10 67.0 39 76.9
Lsat_1_v5_gn_6_14741 Lactuca sativa HOM05D000032 ORTHO05D004142 5.2e-10 67.0 39 82.1
Pp3c1_37280 Physcomitrium patens HOM05D000032 ORTHO05D004142 5.2e-10 67.0 39 76.9
SEGI_02965 Sequoiadendron giganteum HOM05D000032 ORTHO05D004142 5.2e-10 67.0 39 79.5
vmacro05544 Vaccinium macrocarpon HOM05D000032 ORTHO05D004142 5.2e-10 67.0 39 79.5
Glyma.07G075000 Glycine max HOM05D000032 ORTHO05D004142 6.8e-10 66.6 39 79.5
TPR.G9305 Trifolium pratense HOM05D000032 ORTHO05D004142 8.9e-10 66.2 39 79.5
MCO16G295 Micromonas commoda HOM05D000032 ORTHO05D004142 1.2e-09 65.9 39 76.9
Sabra06G0194900 Salix brachista HOM05D000032 ORTHO05D004142 1.5e-09 65.5 50 66.0
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 1.5e-09 65.5 50 66.0
TPR.G4917 Trifolium pratense HOM05D000032 ORTHO05D004142 1.5e-09 65.5 39 76.9
Rhsim02G0247300 Rhododendron simsii HOM05D000032 ORTHO05D004142 2.0e-09 65.1 39 79.5
CDE08G0033 Ceratophyllum demersum HOM05D000032 ORTHO05D004142 2.6e-09 64.7 39 74.4
CDE08G1177 Ceratophyllum demersum HOM05D000032 ORTHO05D004142 2.6e-09 64.7 39 74.4
Lj7C222T2 Lonicera japonica HOM05D000032 ORTHO05D004142 2.6e-09 64.7 39 82.1
Mapoly0116s0020 Marchantia polymorpha HOM05D000032 ORTHO05D004142 2.6e-09 64.7 39 74.4
Os03g0669000 Oryza sativa ssp. japonica HOM05D000032 ORTHO05D004142 2.6e-09 64.7 39 76.9
Psat5g217000 Pisum sativum HOM05D000032 ORTHO05D004142 2.6e-09 64.7 39 76.9
Gorai.007G029000 Gossypium raimondii HOM05D000032 ORTHO05D004142 4.4e-09 63.9 51 68.6
CBR_g45454 Chara braunii HOM05D000032 ORTHO05D004142 5.8e-09 63.5 39 71.8
AagrBONN_evm.TU.Sc2ySwM_117.3732 Anthoceros agrestis HOM05D000032 ORTHO05D004142 7.5e-09 63.2 39 74.4
CiPaw.08G085500 Carya illinoinensis HOM05D000032 ORTHO05D004142 7.5e-09 63.2 39 76.9
AUR62018585 Chenopodium quinoa HOM05D000032 ORTHO05D004142 9.8e-09 62.8 39 76.9
AUR62020833 Chenopodium quinoa HOM05D000032 ORTHO05D004142 9.8e-09 62.8 39 76.9
Potri.006G249100 Populus trichocarpa HOM05D000032 ORTHO05D004142 9.8e-09 62.8 39 76.9
AUR62018581 Chenopodium quinoa HOM05D000032 ORTHO05D004142 1.3e-08 62.4 39 76.9
AagrBONN_evm.TU.Sc2ySwM_368.2781 Anthoceros agrestis HOM05D000032 ORTHO05D004142 1.7e-08 62.0 39 74.4
Cre12.g505200 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D004142 1.7e-08 62.0 39 74.4
Psat4g152920 Pisum sativum HOM05D000032 ORTHO05D004142 1.7e-08 62.0 39 74.4
Haze_05082 Corylus avellana HOM05D000032 ORTHO05D004142 2.2e-08 61.6 39 76.9
CiPaw.07G121700 Carya illinoinensis HOM05D000032 ORTHO05D004142 2.9e-08 61.2 40 80.0
Rhsim03G0265000 Rhododendron simsii HOM05D000032 ORTHO05D004142 3.7e-08 60.8 40 72.5
Zm00001eb228070 Zea mays HOM05D000032 ORTHO05D004142 3.7e-08 60.8 39 74.4
Cfa005753 Carpinus fangiana HOM05D000032 ORTHO05D004142 6.4e-08 60.1 39 74.4
Sabra16G0016200 Salix brachista HOM05D000032 ORTHO05D004142 6.4e-08 60.1 44 68.2
SalBow1G3928 Salvia bowleyana HOM05D000032 ORTHO05D004142 6.4e-08 60.1 39 74.4
TPR.G15184 Trifolium pratense HOM05D000032 ORTHO05D004142 1.9e-07 58.5 39 69.2
Os07g0660000 Oryza sativa ssp. japonica HOM05D000032 ORTHO05D004142 2.4e-07 58.2 39 69.2
PRCOL_00000714 Prasinoderma coloniale HOM05D000032 ORTHO05D004142 2.4e-07 58.2 39 66.7
SMO223G0026 Selaginella moellendorffii HOM05D000032 ORTHO05D004142 2.4e-07 58.2 39 69.2
MBI18_g11480_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D004142 3.2e-07 57.8 39 66.7
Potri.016G013900 Populus trichocarpa HOM05D000032 ORTHO05D004142 4.1e-07 57.4 39 71.8
ATR0681G190 Amborella trichopoda HOM05D000032 ORTHO05D004142 5.4e-07 57.0 40 72.5
RcHm_v2.0_Chr7g0218021 Rosa chinensis HOM05D000032 ORTHO05D004142 5.4e-07 57.0 39 69.2
Cfa005754 Carpinus fangiana HOM05D000032 ORTHO05D004142 1.2e-06 55.8 39 66.7
FAN09G3888 Fragaria x ananassa HOM05D006569 ORTHO05D007515 2.1e-06 55.1 40 67.5
FAN02G2661 Fragaria x ananassa HOM05D010037 ORTHO05D007515 4.6e-06 53.9 41 63.4
Haze_05061 Corylus avellana HOM05D000032 ORTHO05D006970 6.0e-06 53.5 39 64.1
FvH4_6g47952 Fragaria vesca HOM05D000032 ORTHO05D022089 6.0e-06 53.5 41 65.9


User provided reference genes

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