Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029808001 Vitis vinifera HOM05D004478 ORTHO05D018875 2.4e-34 148.3 76 100.0
GSVIVG01021441001 Vitis vinifera HOM05D001329 ORTHO05D018875 4.6e-25 117.5 62 95.2
GSVIVG01027657001 Vitis vinifera HOM05D004478 ORTHO05D007440 2.3e-24 115.2 62 93.5
GSVIVG01003802001 Vitis vinifera HOM05D004478 ORTHO05D018875 9.5e-23 109.8 62 88.7
MD02G1313300 Malus domestica HOM05D004478 ORTHO05D007440 1.1e-21 106.3 62 85.5
Prupe.2G141700 Prunus persica HOM05D004478 ORTHO05D007440 1.4e-21 105.9 62 85.5
Actinidia12243 Actinidia chinensis HOM05D004478 ORTHO05D007440 2.0e-20 102.1 62 80.6
Ca_25666_v3 Cicer arietinum L. HOM05D004478 ORTHO05D007440 2.0e-20 102.1 62 82.3
TPR.G2420 Trifolium pratense HOM05D004478 ORTHO05D007440 2.6e-20 101.7 62 82.3
Atru.chr5.277 Acer truncatum HOM05D004478 ORTHO05D007440 3.4e-20 101.3 62 80.6
Cpa.g.sc145.17 Carica papaya HOM05D004478 ORTHO05D007440 4.4e-20 100.9 62 77.4
Potri.014G067400 Populus trichocarpa HOM05D004478 ORTHO05D007440 5.8e-20 100.5 62 80.6
AUR62013659 Chenopodium quinoa HOM05D004478 ORTHO05D007440 7.5e-20 100.1 67 71.6
MD07G1008800 Malus domestica HOM05D004478 ORTHO05D007440 7.5e-20 100.1 62 82.3
Hund27372 Selenicereus undatus HOM05D004478 ORTHO05D007440 9.9e-20 99.8 62 77.4
Actinidia12201 Actinidia chinensis HOM05D004478 ORTHO05D007440 1.3e-19 99.4 62 77.4
Manes.05G047400 Manihot esculenta HOM05D004478 ORTHO05D007440 1.3e-19 99.4 62 82.3
Psat6g230960 Pisum sativum HOM05D004478 ORTHO05D007440 1.3e-19 99.4 62 80.6
Eucgr.E01450 Eucalyptus grandis HOM05D004478 ORTHO05D007440 1.7e-19 99.0 62 79.0
QL04p040018 Quercus lobata HOM05D004478 ORTHO05D007440 2.2e-19 98.6 62 79.0
CiPaw.14G027200 Carya illinoinensis HOM05D004478 ORTHO05D007440 6.4e-19 97.1 62 79.0
TWI14G0506 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 6.4e-19 97.1 62 74.2
TWI14G0849 Tripterygium wilfordii HOM05D004478 ORTHO05D018875 6.4e-19 97.1 62 74.2
COL.COLO4_12522 Corchorus olitorius HOM05D004478 ORTHO05D007440 8.3e-19 96.7 62 77.4
Lalb_Chr02g0146291 Lupinus albus HOM05D004478 ORTHO05D007440 8.3e-19 96.7 62 75.8
FvH4_7g07690 Fragaria vesca HOM05D004478 ORTHO05D007440 1.1e-18 96.3 62 77.4
FAN06G3638 Fragaria x ananassa HOM05D004478 ORTHO05D007440 1.1e-18 96.3 62 77.4
MBI04_g11448_MAGBIO Magnolia biondii HOM05D004478 ORTHO05D007440 1.1e-18 96.3 62 74.2
Rhsim07G0029300 Rhododendron simsii HOM05D004478 ORTHO05D007440 1.1e-18 96.3 62 74.2
Haze_02653 Corylus avellana HOM05D004478 ORTHO05D007440 1.4e-18 95.9 62 77.4
Glyma.20G110600 Glycine max HOM05D004478 ORTHO05D007440 1.4e-18 95.9 62 74.2
Lj9C568G3 Lonicera japonica HOM05D004478 ORTHO05D007440 1.4e-18 95.9 62 72.6
Lj5g0020792 Lotus japonicus HOM05D004478 ORTHO05D007440 1.4e-18 95.9 62 75.8
AUR62004186 Chenopodium quinoa HOM05D004478 ORTHO05D007440 1.9e-18 95.5 67 68.7
CsaV3_6G006310 Cucumis sativus L. HOM05D004478 ORTHO05D007440 1.9e-18 95.5 62 75.8
DCAR_015895 Daucus carota HOM05D004478 ORTHO05D007440 1.9e-18 95.5 62 74.2
arahy.Tifrunner.gnm1.ann1.W3JVU2 Arachis hypogaea HOM05D004478 ORTHO05D007440 2.4e-18 95.1 62 74.2
Duzib213G0292 Durio zibethinus HOM05D004478 ORTHO05D007440 2.4e-18 95.1 62 74.2
FAN03G2702 Fragaria x ananassa HOM05D004478 ORTHO05D007440 2.4e-18 95.1 62 75.8
Glyma.10G279100 Glycine max HOM05D004478 ORTHO05D007440 2.4e-18 95.1 62 74.2
Gohir.D05G336900 Gossypium hirsutum HOM05D004478 ORTHO05D007440 2.4e-18 95.1 62 75.8
Gorai.009G361000 Gossypium raimondii HOM05D004478 ORTHO05D007440 2.4e-18 95.1 62 75.8
PGR042G4004 Punica granatum HOM05D004478 ORTHO05D007440 2.4e-18 95.1 62 75.8
RcHm_v2.0_Chr1g0342581 Rosa chinensis HOM05D004478 ORTHO05D007440 2.4e-18 95.1 62 77.4
Thecc.01G379300 Theobroma cacao HOM05D004478 ORTHO05D007440 2.4e-18 95.1 62 74.2
FAN10G0184 Fragaria x ananassa HOM05D004478 ORTHO05D007440 3.2e-18 94.7 62 77.4
Gohir.A04G045800 Gossypium hirsutum HOM05D004478 ORTHO05D007440 3.2e-18 94.7 62 75.8
CSS0018497 Camellia sinensis var. sinensis HOM05D004478 ORTHO05D007440 4.1e-18 94.4 62 75.8
ClCG06G000530 Citrullus lanatus HOM05D004478 ORTHO05D007440 4.1e-18 94.4 62 75.8
MELO3C022488.2 Cucumis melo HOM05D004478 ORTHO05D007440 4.1e-18 94.4 62 75.8
Sabra14G0047400 Salix brachista HOM05D004478 ORTHO05D007440 4.1e-18 94.4 62 77.4
vmacro13419 Vaccinium macrocarpon HOM05D004478 ORTHO05D007440 4.1e-18 94.4 62 72.6
Ciclev10018542m.g Citrus clementina HOM05D004478 ORTHO05D007440 5.4e-18 94.0 62 74.2
THA.LOC104827612 Tarenaya hassleriana HOM05D004478 ORTHO05D007440 9.2e-18 93.2 62 75.8
PGSC0003DMG400025966 Solanum tuberosum HOM05D004478 ORTHO05D007440 1.2e-17 92.8 62 72.6
EL10Ac1g00864 Beta vulgaris HOM05D004478 ORTHO05D007440 1.6e-17 92.4 62 71.0
MSTRG.4901 Avicennia marina HOM05D004478 ORTHO05D007440 2.1e-17 92.0 61 70.5
Cfa011194 Carpinus fangiana HOM05D004478 ORTHO05D007440 2.1e-17 92.0 62 74.2
TWI59G0724 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 2.1e-17 92.0 62 72.6
arahy.Tifrunner.gnm1.ann1.ZTQI5E Arachis hypogaea HOM05D004478 ORTHO05D007440 3.5e-17 91.3 62 71.0
Sopen01g036830 Solanum pennellii HOM05D004478 ORTHO05D007440 3.5e-17 91.3 62 71.0
ECA236G4615 Erigeron canadensis HOM05D004478 ORTHO05D007440 6.0e-17 90.5 62 69.4
VMungo0720G2491 Vigna mungo HOM05D004478 ORTHO05D007440 6.0e-17 90.5 62 71.0
Migut.N01621 Erythranthe guttata HOM05D004478 ORTHO05D007440 1.0e-16 89.7 62 67.7
Solyc01g091080.3 Solanum lycopersicum HOM05D004478 ORTHO05D007440 1.0e-16 89.7 62 71.0
Ah.05g174780 Amaranthus hybridus HOM05D004478 ORTHO05D007440 1.3e-16 89.4 62 64.5
Cc02_g24170 Coffea canephora HOM05D004478 ORTHO05D007440 1.3e-16 89.4 62 69.4
Oeu064473.1 Olea europaea HOM05D004478 ORTHO05D007440 1.3e-16 89.4 62 66.1
Phvul.007G022200 Phaseolus vulgaris HOM05D004478 ORTHO05D007440 1.3e-16 89.4 62 71.0
Medtr1g112130 Medicago truncatula HOM05D004478 ORTHO05D007440 1.7e-16 89.0 62 71.0
arahy.Tifrunner.gnm1.ann1.MXE7NW Arachis hypogaea HOM05D004478 ORTHO05D007440 2.3e-16 88.6 62 69.4
arahy.Tifrunner.gnm1.ann1.R3KQ80 Arachis hypogaea HOM05D004478 ORTHO05D007440 2.3e-16 88.6 62 69.4
PSO782G0861 Papaver somniferum HOM05D004478 ORTHO05D007440 2.3e-16 88.6 62 66.1
AL5G43050 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 3.0e-16 88.2 62 69.4
Sc02g0002670 Simmondsia chinensis HOM05D004478 ORTHO05D007440 3.0e-16 88.2 63 69.8
AT3G60740 Arabidopsis thaliana HOM05D004478 ORTHO05D007440 3.9e-16 87.8 62 69.4
Carub.0005s2747 Capsella rubella HOM05D004478 ORTHO05D007440 3.9e-16 87.8 62 67.7
CAN.G911.6 Capsicum annuum HOM05D004478 ORTHO05D007440 3.9e-16 87.8 65 63.1
Lsat_1_v5_gn_7_9321 Lactuca sativa HOM05D004478 ORTHO05D007440 3.9e-16 87.8 62 67.7
Sed0027727 Sechium edule HOM05D004478 ORTHO05D007440 3.9e-16 87.8 62 71.0
SalBow5G5434 Salvia bowleyana HOM05D004478 ORTHO05D007440 6.6e-16 87.0 62 64.5
Aqoxy7G00707 Aquilegia oxysepala HOM05D004478 ORTHO05D007440 8.6e-16 86.7 62 64.5
HanXRQChr04g0122511 Helianthus annuus HOM05D004478 ORTHO05D007440 1.1e-15 86.3 62 66.1
Aa31LG10G14990 Aethionema arabicum HOM05D004478 ORTHO05D007440 5.6e-15 84.0 61 65.6
Nitab4.5_0010730g0030 Nicotiana tabacum HOM05D004478 ORTHO05D007440 5.6e-15 84.0 61 67.2
Nn6g34058 Nelumbo nucifera HOM05D004478 ORTHO05D007440 9.5e-15 83.2 63 68.3
Zm00001eb220640 Zea mays HOM05D004478 ORTHO05D007440 1.6e-14 82.4 62 62.9
Nitab4.5_0000457g0060 Nicotiana tabacum HOM05D004478 ORTHO05D007440 1.4e-13 79.3 61 63.9
CARHR171130 Cardamine hirsuta HOM05D004478 ORTHO05D007440 2.4e-13 78.6 62 58.1
Nitab4.5_0000252g0220 Nicotiana tabacum HOM05D004478 ORTHO05D007440 2.4e-13 78.6 61 65.6
unitig_32.g11469 Utricularia gibba HOM05D004478 ORTHO05D007440 4.0e-13 77.8 60 65.0
Os10g0508500 Oryza sativa ssp. japonica HOM05D004478 ORTHO05D007440 6.8e-13 77.0 62 61.3
SHI13530 Sapria himalayana HOM05D004478 ORTHO05D007440 1.2e-12 76.3 62 59.7
ATR0829G158 Amborella trichopoda HOM05D004478 ORTHO05D007440 1.7e-11 72.4 63 57.1
Peaxi162Scf00013g02923 Petunia axillaris HOM05D004478 ORTHO05D007440 2.9e-11 71.6 62 58.1
SGA_v2.0_scaffold43G16502 Striga asiatica HOM05D004478 ORTHO05D007440 2.9e-11 71.6 62 53.2
Thhalv10005754m.g Eutrema salsugineum HOM05D004478 ORTHO05D007440 1.1e-10 69.7 61 55.7
A04p01470 Brassica napus HOM05D004478 ORTHO05D007440 5.4e-10 67.4 61 52.5
BraA04t15865Z Brassica rapa HOM05D004478 ORTHO05D007440 5.4e-10 67.4 61 52.5
HPP92_014468 Vanilla planifolia HOM05D004478 ORTHO05D007440 1.6e-09 65.9 62 53.2
C04p31950 Brassica napus HOM05D004478 ORTHO05D007440 3.5e-09 64.7 61 52.5
BolC4t24748H Brassica oleracea HOM05D004478 ORTHO05D007440 3.5e-09 64.7 61 52.5
Sp5g02510 Schrenkiella parvula HOM05D004478 ORTHO05D007440 6.0e-09 63.9 56 57.1
Carub.0002s1114 Capsella rubella HOM05D004478 ORTHO05D007440 7.8e-09 63.5 61 54.1
CARHR186540 Cardamine hirsuta HOM05D004478 ORTHO05D018875 1.0e-08 63.2 57 56.1
Peaxi162Scf00003g02046 Petunia axillaris HOM05D004478 ORTHO05D018875 3.9e-08 61.2 61 45.9
AL2G22100 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 6.6e-08 60.5 59 57.6
Peaxi162Scf00003g02040 Petunia axillaris HOM05D004478 ORTHO05D018875 1.1e-07 59.7 61 44.3
Mapoly0039s0061 Marchantia polymorpha HOM05D004478 ORTHO05D007440 1.9e-07 58.9 66 43.9
CDE12G0470 Ceratophyllum demersum HOM05D004478 ORTHO05D007440 2.5e-07 58.5 62 53.2
CAN.G433.8 Capsicum annuum HOM05D004478 ORTHO05D018875 3.3e-07 58.2 62 50.0
SMO147G0207 Selaginella moellendorffii HOM05D004478 ORTHO05D007440 1.2e-06 56.2 58 51.7
Pp3c2_18070 Physcomitrium patens HOM05D004478 ORTHO05D007440 3.6e-06 54.7 67 43.3


User provided reference genes

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