Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029790001 Vitis vinifera HOM05D005123 ORTHO05D006532 3.0e-72 275.0 135 100.0
GSVIVG01036232001 Vitis vinifera HOM05D005123 ORTHO05D006532 2.4e-24 115.9 80 70.0
FAN07G0296 Fragaria x ananassa HOM05D005123 ORTHO05D006532 7.6e-23 110.9 133 45.9
RcHm_v2.0_Chr4g0421451 Rosa chinensis HOM05D005123 ORTHO05D006532 1.3e-22 110.2 102 52.9
Prupe.6G345400 Prunus persica HOM05D005123 ORTHO05D006532 1.7e-22 109.8 78 62.8
CSS0032730 Camellia sinensis var. sinensis HOM05D005123 ORTHO05D006532 2.2e-22 109.4 103 52.4
MD04G1226700 Malus domestica HOM05D005123 ORTHO05D006532 3.8e-22 108.6 78 60.3
CSS0014237 Camellia sinensis var. sinensis HOM05D005123 ORTHO05D006532 6.4e-22 107.8 103 51.5
FvH4_4g17540 Fragaria vesca HOM05D005123 ORTHO05D006532 6.4e-22 107.8 133 45.9
Dinv17936 Davidia involucrata HOM05D005123 ORTHO05D006532 8.4e-22 107.5 86 58.1
FAN12G0393 Fragaria x ananassa HOM05D005123 ORTHO05D006532 8.4e-22 107.5 133 45.9
QL03p027727 Quercus lobata HOM05D005123 ORTHO05D006532 1.1e-21 107.1 100 55.0
Solyc01g097160.3 Solanum lycopersicum HOM05D005123 ORTHO05D006532 1.4e-21 106.7 125 47.2
TAR365G0219 Trochodendron aralioides HOM05D005123 ORTHO05D006532 1.4e-21 106.7 77 63.6
Lj9C664G10 Lonicera japonica HOM05D005123 ORTHO05D006532 2.4e-21 105.9 72 66.7
Nitab4.5_0010168g0020 Nicotiana tabacum HOM05D005123 ORTHO05D006532 2.4e-21 105.9 80 61.2
PGSC0003DMG400027514 Solanum tuberosum HOM05D005123 ORTHO05D006532 2.4e-21 105.9 80 61.2
CANSAT54G2420 Cannabis sativa HOM05D005123 ORTHO05D006532 3.2e-21 105.5 86 59.3
Cfa006396 Carpinus fangiana HOM05D005123 ORTHO05D006532 4.2e-21 105.1 117 47.0
MSTRG.5089 Avicennia marina HOM05D005123 ORTHO05D006532 7.1e-21 104.4 108 50.0
DCAR_006646 Daucus carota HOM05D005123 ORTHO05D006532 7.1e-21 104.4 124 46.0
Nitab4.5_0002247g0050 Nicotiana tabacum HOM05D005123 ORTHO05D006532 7.1e-21 104.4 80 60.0
Rhsim07G0074600 Rhododendron simsii HOM05D005123 ORTHO05D006532 7.1e-21 104.4 116 50.0
CiPaw.08G122000 Carya illinoinensis HOM05D005123 ORTHO05D006532 9.3e-21 104.0 72 68.1
MBI11_g34846_MAGBIO Magnolia biondii HOM05D005123 ORTHO05D006532 9.3e-21 104.0 76 60.5
Sopen01g040830 Solanum pennellii HOM05D005123 ORTHO05D006532 9.3e-21 104.0 80 58.8
ATR0665G099 Amborella trichopoda HOM05D005123 ORTHO05D006532 1.6e-20 103.2 86 57.0
Aqoxy5G00319 Aquilegia oxysepala HOM05D005123 ORTHO05D006532 1.6e-20 103.2 85 54.1
Hma1.2p1_0817F.1_g223190 Hydrangea macrophylla HOM05D005123 ORTHO05D006532 2.1e-20 102.8 106 48.1
Cc02_g30910 Coffea canephora HOM05D005123 ORTHO05D006532 2.7e-20 102.4 120 45.8
CAN.G134.75 Capsicum annuum HOM05D005123 ORTHO05D006532 3.5e-20 102.1 125 44.8
VMungo0540G0367 Vigna mungo HOM05D005123 ORTHO05D006532 3.5e-20 102.1 85 55.3
Actinidia18366 Actinidia chinensis HOM05D005123 ORTHO05D006532 4.6e-20 101.7 85 56.5
Migut.N01919 Erythranthe guttata HOM05D005123 ORTHO05D006532 6.0e-20 101.3 89 58.4
Lj1g0023983 Lotus japonicus HOM05D005123 ORTHO05D006532 6.0e-20 101.3 102 52.9
Peaxi162Scf00282g00718 Petunia axillaris HOM05D005123 ORTHO05D006532 6.0e-20 101.3 80 58.8
PSO063G6470 Papaver somniferum HOM05D005123 ORTHO05D006532 1.0e-19 100.5 85 54.1
PSO170G0405 Papaver somniferum HOM05D005123 ORTHO05D006532 1.3e-19 100.1 85 54.1
Phvul.006G102800 Phaseolus vulgaris HOM05D005123 ORTHO05D006532 1.3e-19 100.1 85 55.3
Lalb_Chr18g0043951 Lupinus albus HOM05D005123 ORTHO05D006532 1.8e-19 99.8 86 53.5
Hund06950 Selenicereus undatus HOM05D005123 ORTHO05D006532 1.8e-19 99.8 110 49.1
unitig_0.g2303 Utricularia gibba HOM05D005123 ORTHO05D006532 2.3e-19 99.4 103 49.5
Glyma.19G245900 Glycine max HOM05D005123 ORTHO05D006532 3.0e-19 99.0 105 46.7
Potri.005G055800 Populus trichocarpa HOM05D005123 ORTHO05D006532 3.0e-19 99.0 91 54.9
SGA_v2.0_scaffold80G25897 Striga asiatica HOM05D005123 ORTHO05D006532 3.9e-19 98.6 86 55.8
EL10Ac4g09082 Beta vulgaris HOM05D005123 ORTHO05D006532 6.7e-19 97.8 117 44.4
Eucgr.H04317 Eucalyptus grandis HOM05D005123 ORTHO05D006532 6.7e-19 97.8 71 60.6
Cpa.g.sc736.2 Carica papaya HOM05D005123 ORTHO05D006532 8.7e-19 97.4 114 50.0
Thecc.05G280500 Theobroma cacao HOM05D005123 ORTHO05D006532 8.7e-19 97.4 118 48.3
vmacro13816 Vaccinium macrocarpon HOM05D005123 ORTHO05D006532 1.1e-18 97.1 111 49.5
Ciclev10030138m.g Citrus clementina HOM05D005123 ORTHO05D006532 1.5e-18 96.7 71 64.8
SalBow4G0099 Salvia bowleyana HOM05D005123 ORTHO05D006532 1.5e-18 96.7 72 58.3
SalBow4G1942 Salvia bowleyana HOM05D005123 ORTHO05D006532 1.5e-18 96.7 72 58.3
TWI12G0989 Tripterygium wilfordii HOM05D005123 ORTHO05D006532 1.5e-18 96.7 124 42.7
Oeu038460.1 Olea europaea HOM05D005123 ORTHO05D006532 1.9e-18 96.3 80 56.2
Lsat_1_v5_gn_0_36021 Lactuca sativa HOM05D005123 ORTHO05D006532 2.5e-18 95.9 135 43.0
PGR004G1863 Punica granatum HOM05D005123 ORTHO05D006532 3.3e-18 95.5 86 52.3
ClCG02G016790 Citrullus lanatus HOM05D005123 ORTHO05D006532 4.3e-18 95.1 116 44.8
ECA232G3987 Erigeron canadensis HOM05D005123 ORTHO05D006532 4.3e-18 95.1 78 57.7
Manes.08G136400 Manihot esculenta HOM05D005123 ORTHO05D006532 5.6e-18 94.7 86 54.7
Sed0022916 Sechium edule HOM05D005123 ORTHO05D006532 5.6e-18 94.7 120 42.5
TPR.G6919 Trifolium pratense HOM05D005123 ORTHO05D006532 5.6e-18 94.7 118 44.9
BcaB04g19310 Brassica carinata HOM05D005123 ORTHO05D006532 7.4e-18 94.4 130 43.8
AUR62004896 Chenopodium quinoa HOM05D005123 ORTHO05D006532 7.4e-18 94.4 76 55.3
Ca_09430_v3 Cicer arietinum L. HOM05D005123 ORTHO05D006532 7.4e-18 94.4 88 53.4
COL.COLO4_15380 Corchorus olitorius HOM05D005123 ORTHO05D006532 7.4e-18 94.4 117 46.2
MELO3C004395.2 Cucumis melo HOM05D005123 ORTHO05D006532 7.4e-18 94.4 85 50.6
Atru.BG.126.p Acer truncatum HOM05D005123 ORTHO05D006532 1.3e-17 93.6 71 62.0
arahy.Tifrunner.gnm1.ann1.9VED02 Arachis hypogaea HOM05D005123 ORTHO05D006532 1.6e-17 93.2 125 44.8
FAN12G0908 Fragaria x ananassa HOM05D005123 ORTHO05D006532 1.6e-17 93.2 55 72.7
Psat0s169g0040 Pisum sativum HOM05D005123 ORTHO05D006532 1.6e-17 93.2 108 47.2
AL3G14690 Arabidopsis lyrata HOM05D005123 ORTHO05D006532 2.1e-17 92.8 115 47.0
AT3G04650 Arabidopsis thaliana HOM05D005123 ORTHO05D006532 2.8e-17 92.4 115 47.0
arahy.Tifrunner.gnm1.ann1.01P7ER Arachis hypogaea HOM05D005123 ORTHO05D006532 3.6e-17 92.0 123 44.7
CsaV3_2G003960 Cucumis sativus L. HOM05D005123 ORTHO05D006532 3.6e-17 92.0 121 39.7
Medtr7g115310 Medicago truncatula HOM05D005123 ORTHO05D006532 4.8e-17 91.7 79 54.4
Aa31LG5G15060 Aethionema arabicum HOM05D005123 ORTHO05D006532 6.2e-17 91.3 85 51.8
CARHR078850 Cardamine hirsuta HOM05D005123 ORTHO05D006532 6.2e-17 91.3 115 46.1
Gorai.004G247100 Gossypium raimondii HOM05D005123 ORTHO05D006532 6.2e-17 91.3 118 49.2
Gorai.004G247500 Gossypium raimondii HOM05D005123 ORTHO05D006532 6.2e-17 91.3 118 49.2
THA.LOC104802845 Tarenaya hassleriana HOM05D005123 ORTHO05D006532 6.2e-17 91.3 85 51.8
Carub.0003s0381 Capsella rubella HOM05D005123 ORTHO05D006532 8.1e-17 90.9 115 44.3
Gohir.D02G179700 Gossypium hirsutum HOM05D005123 ORTHO05D006532 8.1e-17 90.9 118 49.2
HanXRQChr09g0259781 Helianthus annuus HOM05D005123 ORTHO05D006532 8.1e-17 90.9 77 57.1
Sp3g03490 Schrenkiella parvula HOM05D005123 ORTHO05D006532 8.1e-17 90.9 115 46.1
Gohir.A07G068900 Gossypium hirsutum HOM05D005123 ORTHO05D006532 1.1e-16 90.5 141 40.4
Gohir.A08G216000 Gossypium hirsutum HOM05D005123 ORTHO05D006532 1.1e-16 90.5 118 48.3
Gohir.A13G075900 Gossypium hirsutum HOM05D005123 ORTHO05D006532 1.1e-16 90.5 141 40.4
Gohir.D11G185600 Gossypium hirsutum HOM05D005123 ORTHO05D006532 1.1e-16 90.5 141 40.4
BcaC01g04358 Brassica carinata HOM05D005123 ORTHO05D006532 1.4e-16 90.1 115 44.3
A03p33760 Brassica napus HOM05D005123 ORTHO05D006532 1.4e-16 90.1 115 44.3
Haze_04379 Corylus avellana HOM05D005123 ORTHO05D006532 1.4e-16 90.1 101 46.5
BraA03t12549Z Brassica rapa HOM05D005123 ORTHO05D006532 1.8e-16 89.7 122 43.4
Gohir.D01G029000 Gossypium hirsutum HOM05D005123 ORTHO05D006532 2.4e-16 89.4 118 47.5
Gohir.D08G232600 Gossypium hirsutum HOM05D005123 ORTHO05D006532 3.1e-16 89.0 141 39.7
Gohir.D08G124750 Gossypium hirsutum HOM05D005123 ORTHO05D006532 4.0e-16 88.6 128 43.8
Sabra05G0048700 Salix brachista HOM05D005123 ORTHO05D006532 5.3e-16 88.2 55 70.9
C03p41060 Brassica napus HOM05D005123 ORTHO05D006532 6.9e-16 87.8 115 43.5
BolC3t16395H Brassica oleracea HOM05D005123 ORTHO05D006532 6.9e-16 87.8 115 43.5
Duzib177G0775 Durio zibethinus HOM05D005123 ORTHO05D006532 6.9e-16 87.8 117 48.7
Thhalv10020605m.g Eutrema salsugineum HOM05D005123 ORTHO05D006532 4.5e-15 85.1 112 42.9
HPP92_026486 Vanilla planifolia HOM05D005123 ORTHO05D006532 1.1e-13 80.5 91 47.3
AagrBONN_evm.TU.Sc2ySwM_228.1429 Anthoceros agrestis HOM05D005123 ORTHO05D006532 2.4e-13 79.3 99 46.5
Ciclev10029734m.g Citrus clementina HOM05D005123 ORTHO05D006532 2.4e-13 79.3 54 66.7
SMO367G1262 Selaginella moellendorffii HOM05D005123 ORTHO05D006532 4.2e-13 78.6 86 47.7
HPP92_014225 Vanilla planifolia HOM05D005123 ORTHO05D006532 4.2e-13 78.6 91 46.2
Zm00001eb030960 Zea mays HOM05D005123 ORTHO05D006532 7.1e-13 77.8 89 46.1
Pp3c3_15330 Physcomitrium patens HOM05D005123 ORTHO05D006532 6.0e-12 74.7 75 52.0
CBR_g26324 Chara braunii HOM05D005123 ORTHO05D006532 1.3e-11 73.6 96 44.8
Mapoly0079s0067 Marchantia polymorpha HOM05D005123 ORTHO05D006532 3.9e-11 72.0 75 46.7
Os12g0597400 Oryza sativa ssp. japonica HOM05D005123 ORTHO05D006532 1.3e-09 67.0 95 38.9
Ah.04g162190 Amaranthus hybridus HOM05D005123 ORTHO05D006532 4.8e-09 65.1 167 28.7
Cre03.g207150 Chlamydomonas reinhardtii HOM05D005123 ORTHO05D006532 4.8e-09 65.1 90 41.1


User provided reference genes

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