Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029694001 Vitis vinifera HOM05D004322 ORTHO05D005033 3.7e-111 404.8 198 100.0
TAR376G0532 Trochodendron aralioides HOM05D004322 ORTHO05D005033 2.3e-92 342.4 198 82.3
Atru.chr6.1013_Atru.chr6.1014 Acer truncatum HOM05D004322 ORTHO05D005033 1.1e-91 340.1 198 82.3
Glyma.08G183900 Glycine max HOM05D004322 ORTHO05D005033 3.1e-89 332.0 198 78.8
Manes.10G133500 Manihot esculenta HOM05D004322 ORTHO05D005033 3.4e-88 328.6 198 77.8
Nn5g28787 Nelumbo nucifera HOM05D004322 ORTHO05D005033 3.4e-88 328.6 198 77.8
Actinidia39064 Actinidia chinensis HOM05D004322 ORTHO05D005033 2.9e-87 325.5 198 77.8
arahy.Tifrunner.gnm1.ann1.H25YH4 Arachis hypogaea HOM05D004322 ORTHO05D005033 2.9e-87 325.5 198 77.3
arahy.Tifrunner.gnm1.ann1.1NY3A5 Arachis hypogaea HOM05D004322 ORTHO05D005033 4.9e-87 324.7 198 77.3
Hma1.2p1_0557F.1_g178250 Hydrangea macrophylla HOM05D004322 ORTHO05D005033 4.9e-87 324.7 199 78.4
Glyma.15G048900 Glycine max HOM05D004322 ORTHO05D005033 1.1e-86 323.6 198 76.3
Phvul.006G211500 Phaseolus vulgaris HOM05D004322 ORTHO05D005033 1.1e-86 323.6 198 77.3
Lj6g0010196 Lotus japonicus HOM05D004322 ORTHO05D005033 3.2e-86 322.0 198 76.8
CANSAT11G1833 Cannabis sativa HOM05D004322 ORTHO05D005033 4.2e-86 321.6 198 75.8
Aqoxy5G02055 Aquilegia oxysepala HOM05D004322 ORTHO05D005033 5.4e-86 321.2 198 75.3
TWI14G0809 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 7.1e-86 320.9 198 76.8
Gohir.D03G167900 Gossypium hirsutum HOM05D004322 ORTHO05D005033 1.6e-85 319.7 198 75.3
Gorai.003G177600 Gossypium raimondii HOM05D004322 ORTHO05D005033 1.6e-85 319.7 198 75.3
CiPaw.05G042000 Carya illinoinensis HOM05D004322 ORTHO05D005033 2.1e-85 319.3 198 76.3
COL.COLO4_07504 Corchorus olitorius HOM05D004322 ORTHO05D005033 2.7e-85 318.9 198 75.8
Potri.001G207900 Populus trichocarpa HOM05D004322 ORTHO05D005033 2.7e-85 318.9 200 76.5
TWI23G0630 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 2.7e-85 318.9 198 76.3
TWI23G1123 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 2.7e-85 318.9 198 76.3
Ca_00095_v3 Cicer arietinum L. HOM05D004322 ORTHO05D005033 3.5e-85 318.5 198 75.3
Ca_29934_v3 Cicer arietinum L. HOM05D004322 ORTHO05D005033 3.5e-85 318.5 198 75.3
Dinv24253 Davidia involucrata HOM05D004322 ORTHO05D005033 3.5e-85 318.5 198 76.8
Gohir.A03G004600 Gossypium hirsutum HOM05D004322 ORTHO05D005033 3.5e-85 318.5 198 74.7
MD15G1419900 Malus domestica HOM05D004322 ORTHO05D005033 3.5e-85 318.5 198 76.3
Thecc.03G241900 Theobroma cacao HOM05D004322 ORTHO05D005033 6.0e-85 317.8 198 75.8
VMungo0251G0859 Vigna mungo HOM05D004322 ORTHO05D005033 1.0e-84 317.0 198 75.8
Duzib084G1309 Durio zibethinus HOM05D004322 ORTHO05D005033 1.7e-84 316.2 198 75.3
Medtr2g007840 Medicago truncatula HOM05D004322 ORTHO05D005033 1.7e-84 316.2 198 72.2
Ciclev10002548m.g Citrus clementina HOM05D004322 ORTHO05D005033 3.9e-84 315.1 199 76.4
RcHm_v2.0_Chr7g0223291 Rosa chinensis HOM05D004322 ORTHO05D005033 8.7e-84 313.9 198 72.7
AUR62018226 Chenopodium quinoa HOM05D004322 ORTHO05D005033 1.1e-83 313.5 198 74.2
MD08G1227500 Malus domestica HOM05D004322 ORTHO05D005033 1.5e-83 313.2 198 73.7
Eucgr.I02706 Eucalyptus grandis HOM05D004322 ORTHO05D005033 2.5e-83 312.4 198 74.2
PGSC0003DMG400029776 Solanum tuberosum HOM05D004322 ORTHO05D005033 2.5e-83 312.4 198 73.2
Duzib205G0368 Durio zibethinus HOM05D004322 ORTHO05D005033 3.3e-83 312.0 198 73.7
PSO063G0058 Papaver somniferum HOM05D004322 ORTHO05D005033 7.3e-83 310.8 198 75.3
ECA240G2745 Erigeron canadensis HOM05D004322 ORTHO05D005033 1.3e-82 310.1 198 72.2
PSO782G1933 Papaver somniferum HOM05D004322 ORTHO05D005033 1.3e-82 310.1 198 74.7
PGR042G3064 Punica granatum HOM05D004322 ORTHO05D005033 1.3e-82 310.1 198 70.2
Ah.11g045370 Amaranthus hybridus HOM05D004322 ORTHO05D005033 2.1e-82 309.3 198 72.2
HanXRQChr03g0066481 Helianthus annuus HOM05D004322 ORTHO05D005033 2.8e-82 308.9 198 70.7
Prupe.1G564800 Prunus persica HOM05D004322 ORTHO05D005033 2.8e-82 308.9 198 73.2
FvH4_5g29770 Fragaria vesca HOM05D004322 ORTHO05D005033 3.6e-82 308.5 198 71.7
AUR62037741 Chenopodium quinoa HOM05D004322 ORTHO05D005033 4.8e-82 308.1 198 73.7
BcaC02g09358 Brassica carinata HOM05D004322 ORTHO05D005033 6.2e-82 307.8 198 71.2
C04p41720 Brassica napus HOM05D004322 ORTHO05D005033 6.2e-82 307.8 198 71.2
Solyc01g104600.4 Solanum lycopersicum HOM05D004322 ORTHO05D005033 6.2e-82 307.8 198 72.2
BraA08t33032Z Brassica rapa HOM05D004322 ORTHO05D005033 8.1e-82 307.4 198 71.2
vmacro01793 Vaccinium macrocarpon HOM05D004322 ORTHO05D005033 8.1e-82 307.4 217 71.0
Aqoxy5G01565 Aquilegia oxysepala HOM05D004322 ORTHO05D005033 1.4e-81 306.6 198 73.2
EL10Ac2g03233 Beta vulgaris HOM05D004322 ORTHO05D005033 1.4e-81 306.6 200 71.5
MSTRG.16544 Avicennia marina HOM05D004322 ORTHO05D005033 3.1e-81 305.4 198 71.2
BolC8t48099H Brassica oleracea HOM05D004322 ORTHO05D005033 3.1e-81 305.4 198 71.2
Sp7g11930 Schrenkiella parvula HOM05D004322 ORTHO05D005033 1.2e-80 303.5 198 70.7
BcaB04g18113 Brassica carinata HOM05D004322 ORTHO05D005033 2.0e-80 302.8 198 70.2
A04p08040 Brassica napus HOM05D004322 ORTHO05D005033 2.0e-80 302.8 198 70.2
FAN08G1384 Fragaria x ananassa HOM05D004322 ORTHO05D005033 2.0e-80 302.8 206 69.4
TPR.G19733 Trifolium pratense HOM05D004322 ORTHO05D005033 2.0e-80 302.8 198 71.7
AT4G14110 Arabidopsis thaliana HOM05D004322 ORTHO05D005033 2.6e-80 302.4 198 71.2
BcaB02g08633 Brassica carinata HOM05D004322 ORTHO05D005033 2.6e-80 302.4 198 69.7
FAN04G2215 Fragaria x ananassa HOM05D004322 ORTHO05D005033 4.4e-80 301.6 198 71.7
BcaC07g37720 Brassica carinata HOM05D004322 ORTHO05D005033 5.8e-80 301.2 198 69.2
Migut.N01026 Erythranthe guttata HOM05D004322 ORTHO05D005033 5.8e-80 301.2 198 69.2
FAN18G2629 Fragaria x ananassa HOM05D004322 ORTHO05D005033 5.8e-80 301.2 206 68.9
AL7G42300 Arabidopsis lyrata HOM05D004322 ORTHO05D005033 9.9e-80 300.4 198 70.2
CARHR220130 Cardamine hirsuta HOM05D004322 ORTHO05D005033 1.3e-79 300.1 198 69.2
Aa31LG9G3260 Aethionema arabicum HOM05D004322 ORTHO05D005033 1.7e-79 299.7 198 70.2
MSTRG.5246 Avicennia marina HOM05D004322 ORTHO05D005033 1.7e-79 299.7 198 69.7
Carub.0007s2831 Capsella rubella HOM05D004322 ORTHO05D005033 2.2e-79 299.3 198 70.2
Thhalv10025920m.g Eutrema salsugineum HOM05D004322 ORTHO05D005033 2.9e-79 298.9 198 69.7
A08p10330 Brassica napus HOM05D004322 ORTHO05D005033 3.8e-79 298.5 198 69.7
THA.LOC104804784 Tarenaya hassleriana HOM05D004322 ORTHO05D005033 6.4e-79 297.7 198 69.7
FAN13G1883 Fragaria x ananassa HOM05D004322 ORTHO05D005033 1.2e-77 293.5 198 69.2
SalBow6G0151 Salvia bowleyana HOM05D004322 ORTHO05D005033 2.1e-77 292.7 234 61.1
SalBow6G5232 Salvia bowleyana HOM05D004322 ORTHO05D005033 2.7e-77 292.4 234 60.7
BolC4t25750H Brassica oleracea HOM05D004322 ORTHO05D005033 3.5e-77 292.0 219 63.9
BraA04t16492Z Brassica rapa HOM05D004322 ORTHO05D005033 4.6e-77 291.6 216 64.4
Sed0005743 Sechium edule HOM05D004322 ORTHO05D005033 6.0e-77 291.2 198 68.7
ClCG09G014140 Citrullus lanatus HOM05D004322 ORTHO05D005033 3.0e-76 288.9 198 68.2
Lj9A313T47 Lonicera japonica HOM05D004322 ORTHO05D005033 5.1e-76 288.1 170 81.2
Cfa015337 Carpinus fangiana HOM05D004322 ORTHO05D005033 8.7e-76 287.3 176 77.8
Sopen01g047110 Solanum pennellii HOM05D004322 ORTHO05D005033 8.7e-76 287.3 241 59.8
Hund13069 Selenicereus undatus HOM05D004322 ORTHO05D005033 1.9e-75 286.2 253 58.1
BolC3t14638H Brassica oleracea HOM05D004322 ORTHO05D005033 3.3e-75 285.4 198 66.2
CsaV3_6G037290 Cucumis sativus L. HOM05D004322 ORTHO05D005033 3.3e-75 285.4 198 67.2
ATR0584G136 Amborella trichopoda HOM05D004322 ORTHO05D005033 1.3e-74 283.5 198 65.2
SGA_v2.0_scaffold145G36061 Striga asiatica HOM05D004322 ORTHO05D005033 2.8e-74 282.3 236 58.1
MELO3C014386.2 Cucumis melo HOM05D004322 ORTHO05D005033 3.6e-74 282.0 198 66.2
CSS0031640 Camellia sinensis var. sinensis HOM05D004322 ORTHO05D005033 6.9e-73 277.7 171 75.4
CDE05G0654 Ceratophyllum demersum HOM05D004322 ORTHO05D005033 9.0e-73 277.3 198 64.6
HPP92_016157 Vanilla planifolia HOM05D004322 ORTHO05D005033 1.5e-72 276.6 198 65.2
Peaxi162Scf01807g00011 Petunia axillaris HOM05D004322 ORTHO05D005033 2.0e-72 276.2 233 58.4
Sc10g0004980 Simmondsia chinensis HOM05D004322 ORTHO05D005033 1.9e-70 269.6 173 72.8
Medtr0153s0030 Medicago truncatula HOM05D004322 ORTHO05D005033 2.4e-70 269.2 170 71.8
unitig_62.g23621 Utricularia gibba HOM05D004322 ORTHO05D005033 7.1e-70 267.7 198 63.6
Actinidia00226 Actinidia chinensis HOM05D004322 ORTHO05D005033 3.9e-68 261.9 198 67.2
Nitab4.5_0000249g0270 Nicotiana tabacum HOM05D004322 ORTHO05D005033 3.9e-68 261.9 188 68.1
BcaC01g05770 Brassica carinata HOM05D004322 ORTHO05D005033 1.1e-67 260.4 180 66.7
Dinv19343 Davidia involucrata HOM05D004322 ORTHO05D005033 1.1e-67 260.4 155 78.7
Lsat_1_v5_gn_9_116181 Lactuca sativa HOM05D004322 ORTHO05D005033 1.6e-66 256.5 191 63.4
Sabra01G0160700 Salix brachista HOM05D004322 ORTHO05D005033 6.9e-65 251.1 167 73.1
Os04g0428900 Oryza sativa ssp. japonica HOM05D004322 ORTHO05D005033 3.4e-64 248.8 198 58.6
Zm00001eb082980 Zea mays HOM05D004322 ORTHO05D005033 1.4e-62 243.4 198 55.1
Prupe.1G186200 Prunus persica HOM05D004322 ORTHO05D005033 2.7e-61 239.2 160 70.0
Nitab4.5_0003071g0090 Nicotiana tabacum HOM05D004322 ORTHO05D005033 5.3e-57 224.9 198 56.1
SMO353G0429 Selaginella moellendorffii HOM05D004322 ORTHO05D005033 1.0e-55 220.7 198 50.0
Rhsim11G0132600 Rhododendron simsii HOM05D004322 ORTHO05D005033 6.5e-55 218.0 135 77.8
AagrBONN_evm.TU.Sc2ySwM_228.2369 Anthoceros agrestis HOM05D004322 ORTHO05D005033 9.3e-54 214.2 198 49.0
BolC9t60208H Brassica oleracea HOM05D004322 ORTHO05D005033 4.6e-53 211.8 145 64.8
Mapoly0036s0096 Marchantia polymorpha HOM05D004322 ORTHO05D005033 6.7e-52 208.0 193 49.2
Pp3c14_8990 Physcomitrium patens HOM05D004322 ORTHO05D005033 4.5e-48 195.3 194 45.9
Cc02_g22150 Coffea canephora HOM05D004322 ORTHO05D005033 5.0e-47 191.8 115 73.0
THA.LOC104809099 Tarenaya hassleriana HOM05D004322 ORTHO05D005033 4.2e-46 188.7 132 62.9
CBR_g26281 Chara braunii HOM05D004322 ORTHO05D005033 2.1e-45 186.4 160 53.8
Thecc.07G026500 Theobroma cacao HOM05D004322 ORTHO05D005033 3.6e-45 185.7 186 55.4
CDE05G2724 Ceratophyllum demersum HOM05D004322 ORTHO05D005033 1.0e-44 184.1 130 66.9
Haze_01278 Corylus avellana HOM05D004322 ORTHO05D005033 1.1e-43 180.6 143 60.1
Cpa.g.sc157.24 Carica papaya HOM05D004322 ORTHO05D005033 8.2e-42 174.5 110 79.1
QL04p052291 Quercus lobata HOM05D004322 ORTHO05D005033 1.1e-41 174.1 115 68.7
Lalb_Chr15g0090601 Lupinus albus HOM05D004322 ORTHO05D005033 2.4e-41 172.9 130 59.2
Psat1g219720 Pisum sativum HOM05D004322 ORTHO05D005033 4.5e-40 168.7 120 61.7
CBR_g4180 Chara braunii HOM05D004322 ORTHO05D005033 4.2e-38 162.2 143 54.5
SHI16603 Sapria himalayana HOM05D004322 ORTHO05D005033 1.1e-35 154.1 142 48.6
SEGI_09552 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 3.3e-35 152.5 115 56.5
SEGI_31940 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 1.7e-34 150.2 115 55.7
Medtr0153s0020 Medicago truncatula HOM05D004322 ORTHO05D005033 1.3e-31 140.6 87 66.7
Lalb_Chr15g0090591 Lupinus albus HOM05D004322 ORTHO05D005033 1.7e-31 140.2 77 90.9
Cc02_g22140 Coffea canephora HOM05D004322 ORTHO05D005033 8.5e-31 137.9 97 71.1
Zm00001eb422450 Zea mays HOM05D004322 ORTHO05D005033 4.0e-28 129.0 145 39.3
Sabra01G0160600 Salix brachista HOM05D004322 ORTHO05D005033 6.7e-28 128.3 77 84.4
Manes.10G133677 Manihot esculenta HOM05D004322 ORTHO05D005033 8.8e-28 127.9 77 85.7
CAN.G1352.11 Capsicum annuum HOM05D004322 ORTHO05D005033 2.0e-27 126.7 115 54.8
CAN.G1352.10 Capsicum annuum HOM05D004322 ORTHO05D005033 4.8e-26 122.1 77 77.9
Potri.003G022001 Populus trichocarpa HOM05D004322 ORTHO05D005033 1.1e-25 120.9 77 77.9
QL11p019123 Quercus lobata HOM05D004322 ORTHO05D005033 1.1e-25 120.9 75 81.3
Glyma.10G118567 Glycine max HOM05D004322 ORTHO05D005033 3.5e-24 115.9 69 84.1
Oeu044826.1 Olea europaea HOM05D004322 ORTHO05D005033 3.5e-24 115.9 77 72.7
Oeu044828.1 Olea europaea HOM05D004322 ORTHO05D005033 3.5e-24 115.9 77 72.7
Gohir.D08G183600 Gossypium hirsutum HOM05D004322 ORTHO05D005033 5.0e-23 112.1 77 72.7
MBI18_g28448_MAGBIO Magnolia biondii HOM05D004322 ORTHO05D005033 2.1e-21 106.7 65 75.4
Medtr0153s0060 Medicago truncatula HOM05D004322 ORTHO05D005033 2.7e-21 106.3 145 44.8
SEGI_18567 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 4.7e-21 105.5 81 61.7
Oeu012736.1 Olea europaea HOM05D004322 ORTHO05D005033 2.3e-20 103.2 72 70.8
Gohir.D12G215800 Gossypium hirsutum HOM05D004322 ORTHO05D005033 4.0e-20 102.4 75 69.3
Medtr2g007855 Medicago truncatula HOM05D004322 ORTHO05D005033 1.5e-19 100.5 65 72.3
Thecc.07G026400 Theobroma cacao HOM05D004322 ORTHO05D005033 2.6e-19 99.8 71 60.6
Glyma.10G118633 Glycine max HOM05D004322 ORTHO05D005033 5.4e-17 92.0 99 42.4
Cpa.g.sc157.23 Carica papaya HOM05D004322 ORTHO05D005033 2.0e-16 90.1 55 63.6
Lsat_1_v5_gn_9_65501 Lactuca sativa HOM05D001588 ORTHO05D002975 1.1e-14 84.3 55 56.4
PRCOL_00004865 Prasinoderma coloniale HOM05D004322 ORTHO05D005033 9.4e-14 81.3 191 24.1
QL11p019127 Quercus lobata HOM05D004322 ORTHO05D005033 9.4e-14 81.3 64 56.2
Lsat_1_v5_gn_7_68880 Lactuca sativa HOM05D004322 ORTHO05D005033 1.2e-13 80.9 62 53.2
TPR.G19742 Trifolium pratense HOM05D004322 ORTHO05D005033 1.6e-13 80.5 46 82.6
BcaB04g18035 Brassica carinata HOM05D004322 ORTHO05D005033 6.8e-12 75.1 56 60.7
Cre14.g608850 Chlamydomonas reinhardtii HOM05D004322 ORTHO05D005033 4.4e-11 72.4 119 33.6
TPR.G19730 Trifolium pratense HOM05D004322 ORTHO05D005033 9.8e-11 71.2 60 56.7
BcaB07g33266 Brassica carinata HOM05D004322 ORTHO05D005033 2.8e-10 69.7 56 57.1
SEGI_23686 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 4.1e-09 65.9 61 47.5
HPP92_016147 Vanilla planifolia HOM05D004322 ORTHO05D005033 4.1e-09 65.9 52 61.5
VMungo0540G1689 Vigna mungo HOM05D004322 ORTHO05D005033 6.6e-07 58.5 40 77.5
Lsat_1_v5_gn_4_104380 Lactuca sativa HOM05D001722 ORTHO05D048310 3.3e-06 56.2 36 52.8
TAR381G0540 Trochodendron aralioides HOM05D004322 ORTHO05D005033 4.3e-06 55.8 44 61.4


User provided reference genes

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