Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029613001 Vitis vinifera HOM05D004748 ORTHO05D005825 6.5e-128 460.7 223 100.0
GSVIVG01029626001 Vitis vinifera HOM05D004748 ORTHO05D005825 2.3e-101 372.5 186 97.8
CANSAT01G3164 Cannabis sativa HOM05D004748 ORTHO05D005825 1.6e-41 173.7 192 54.2
Haze_16292 Corylus avellana HOM05D004748 ORTHO05D005825 8.6e-40 167.9 167 60.5
QL05p082110 Quercus lobata HOM05D004748 ORTHO05D005825 1.5e-39 167.2 165 58.8
Dinv20350 Davidia involucrata HOM05D004748 ORTHO05D005825 3.3e-39 166.0 142 66.9
BcaB07g33612 Brassica carinata HOM05D004748 ORTHO05D005825 2.1e-38 163.3 123 70.7
Manes.03G081362 Manihot esculenta HOM05D004748 ORTHO05D005825 2.1e-38 163.3 180 55.6
AUR62025643 Chenopodium quinoa HOM05D004748 ORTHO05D005825 2.8e-38 162.9 100 79.0
EL10Ac7g18182 Beta vulgaris HOM05D004748 ORTHO05D005825 6.2e-38 161.8 157 59.2
AUR62001358 Chenopodium quinoa HOM05D004748 ORTHO05D005825 6.2e-38 161.8 100 79.0
Prupe.3G019200 Prunus persica HOM05D004748 ORTHO05D005825 6.2e-38 161.8 186 52.7
Sp1g38250 Schrenkiella parvula HOM05D004748 ORTHO05D005825 6.2e-38 161.8 107 76.6
TWI12G1435 Tripterygium wilfordii HOM05D004748 ORTHO05D005825 6.2e-38 161.8 96 82.3
AT1G51610 Arabidopsis thaliana HOM05D004748 ORTHO05D005825 8.1e-38 161.4 107 76.6
BcaC08g43322 Brassica carinata HOM05D004748 ORTHO05D005825 8.1e-38 161.4 124 69.4
BolC6t35782H Brassica oleracea HOM05D004748 ORTHO05D005825 8.1e-38 161.4 124 69.4
Thhalv10011469m.g Eutrema salsugineum HOM05D004748 ORTHO05D005825 8.1e-38 161.4 122 70.5
Carub.0001s4046 Capsella rubella HOM05D004748 ORTHO05D005825 1.1e-37 161.0 126 69.8
Cpa.g.sc67.6 Carica papaya HOM05D004748 ORTHO05D005825 1.1e-37 161.0 151 59.6
MD09G1160600 Malus domestica HOM05D004748 ORTHO05D005825 1.1e-37 161.0 114 72.8
BraA06t23445Z Brassica rapa HOM05D004748 ORTHO05D005825 1.4e-37 160.6 124 69.4
Cfa002138 Carpinus fangiana HOM05D004748 ORTHO05D005825 1.4e-37 160.6 185 53.0
Gorai.010G141000 Gossypium raimondii HOM05D004748 ORTHO05D005825 1.4e-37 160.6 89 87.6
COL.COLO4_31191 Corchorus olitorius HOM05D004748 ORTHO05D005825 1.8e-37 160.2 97 81.4
BcaB02g11258 Brassica carinata HOM05D004748 ORTHO05D005825 2.4e-37 159.8 116 71.6
THA.LOC104816897 Tarenaya hassleriana HOM05D004748 ORTHO05D005825 2.4e-37 159.8 90 86.7
AL1G59520 Arabidopsis lyrata HOM05D004748 ORTHO05D005825 3.1e-37 159.5 104 76.0
BraA05t20854Z Brassica rapa HOM05D004748 ORTHO05D005825 3.1e-37 159.5 107 75.7
Gohir.D06G120700 Gossypium hirsutum HOM05D004748 ORTHO05D005825 3.1e-37 159.5 89 86.5
Lj3g0017034 Lotus japonicus HOM05D004748 ORTHO05D005825 4.0e-37 159.1 106 76.4
MD17G1146400 Malus domestica HOM05D004748 ORTHO05D005825 4.0e-37 159.1 94 84.0
CARHR041760 Cardamine hirsuta HOM05D004748 ORTHO05D005825 5.2e-37 158.7 114 71.1
Aa31LG10G3160 Aethionema arabicum HOM05D004748 ORTHO05D005825 6.9e-37 158.3 123 65.9
Gohir.A06G115900 Gossypium hirsutum HOM05D004748 ORTHO05D005825 6.9e-37 158.3 89 86.5
Lalb_Chr04g0264641 Lupinus albus HOM05D004748 ORTHO05D005825 6.9e-37 158.3 131 66.4
Hund18602 Selenicereus undatus HOM05D004748 ORTHO05D005825 6.9e-37 158.3 122 69.7
Phvul.008G254900 Phaseolus vulgaris HOM05D004748 ORTHO05D005825 8.9e-37 157.9 90 85.6
Ah.15g094390 Amaranthus hybridus HOM05D004748 ORTHO05D005825 1.2e-36 157.5 103 75.7
CSS0006652 Camellia sinensis var. sinensis HOM05D004748 ORTHO05D005825 1.2e-36 157.5 102 78.4
Sc12g0011080 Simmondsia chinensis HOM05D004748 ORTHO05D005825 1.2e-36 157.5 89 87.6
VMungo0647G1450 Vigna mungo HOM05D004748 ORTHO05D005825 1.2e-36 157.5 99 77.8
BcaC08g43922 Brassica carinata HOM05D004748 ORTHO05D005825 1.5e-36 157.1 107 74.8
BolC6t36471H Brassica oleracea HOM05D004748 ORTHO05D005825 1.5e-36 157.1 107 74.8
Duzib235G0633 Durio zibethinus HOM05D004748 ORTHO05D005825 1.5e-36 157.1 90 84.4
Potri.010G251300 Populus trichocarpa HOM05D004748 ORTHO05D005825 1.5e-36 157.1 104 76.9
RcHm_v2.0_Chr2g0149771 Rosa chinensis HOM05D004748 ORTHO05D005825 1.5e-36 157.1 97 81.4
TPR.G15725 Trifolium pratense HOM05D004748 ORTHO05D005825 1.5e-36 157.1 104 76.0
ClCG09G001570 Citrullus lanatus HOM05D004748 ORTHO05D005825 2.0e-36 156.8 179 55.9
CsaV3_7G033760 Cucumis sativus L. HOM05D004748 ORTHO05D005825 2.6e-36 156.4 96 82.3
Actinidia31132 Actinidia chinensis HOM05D004748 ORTHO05D005825 3.4e-36 156.0 190 52.6
Duzib192G0179 Durio zibethinus HOM05D004748 ORTHO05D005825 3.4e-36 156.0 90 84.4
Glyma.07G020100 Glycine max HOM05D004748 ORTHO05D005825 3.4e-36 156.0 95 82.1
Thecc.06G061000 Theobroma cacao HOM05D004748 ORTHO05D005825 3.4e-36 156.0 89 85.4
FAN05G0392 Fragaria x ananassa HOM05D004748 ORTHO05D005825 4.4e-36 155.6 119 70.6
FAN05G2438 Fragaria x ananassa HOM05D004748 ORTHO05D005825 4.4e-36 155.6 119 70.6
Psat7g261000 Pisum sativum HOM05D004748 ORTHO05D005825 4.4e-36 155.6 115 71.3
CiPaw.01G089000 Carya illinoinensis HOM05D004748 ORTHO05D005825 5.8e-36 155.2 95 80.0
Ca_20497_v3 Cicer arietinum L. HOM05D004748 ORTHO05D005825 5.8e-36 155.2 100 77.0
FvH4_6g37160 Fragaria vesca HOM05D004748 ORTHO05D005825 7.6e-36 154.8 119 70.6
FAN09G1322 Fragaria x ananassa HOM05D004748 ORTHO05D005825 7.6e-36 154.8 119 70.6
FAN14G2305 Fragaria x ananassa HOM05D004748 ORTHO05D005825 7.6e-36 154.8 119 70.6
A06p02380 Brassica napus HOM05D004748 ORTHO05D005825 9.9e-36 154.5 88 85.2
C06p06730 Brassica napus HOM05D004748 ORTHO05D005825 9.9e-36 154.5 87 86.2
PGR102G1746 Punica granatum HOM05D004748 ORTHO05D005825 9.9e-36 154.5 114 69.3
Sed0019048 Sechium edule HOM05D004748 ORTHO05D005825 9.9e-36 154.5 103 74.8
Ciclev10025586m.g Citrus clementina HOM05D004748 ORTHO05D005825 1.3e-35 154.1 99 79.8
arahy.Tifrunner.gnm1.ann1.2A2X48 Arachis hypogaea HOM05D004748 ORTHO05D005825 2.9e-35 152.9 169 56.8
arahy.Tifrunner.gnm1.ann1.660VQ8 Arachis hypogaea HOM05D004748 ORTHO05D005825 3.8e-35 152.5 168 57.1
Hma1.2p1_0517F.1_g170660 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 4.9e-35 152.1 100 76.0
Glyma.08G222000 Glycine max HOM05D004748 ORTHO05D005825 1.1e-34 151.0 98 79.6
Medtr4g008150 Medicago truncatula HOM05D004748 ORTHO05D005825 1.9e-34 150.2 105 75.2
MSTRG.10889 Avicennia marina HOM05D004748 ORTHO05D005825 2.4e-34 149.8 143 55.9
PGSC0003DMG400026506 Solanum tuberosum HOM05D004748 ORTHO05D005825 2.4e-34 149.8 103 71.8
Sabra10G0195200 Salix brachista HOM05D004748 ORTHO05D005825 3.2e-34 149.4 100 76.0
ECA234G0898 Erigeron canadensis HOM05D004748 ORTHO05D005825 7.8e-33 144.8 94 76.6
Eucgr.F04020 Eucalyptus grandis HOM05D004748 ORTHO05D005825 1.3e-32 144.1 91 79.1
Solyc06g063250.3 Solanum lycopersicum HOM05D004748 ORTHO05D005825 1.3e-32 144.1 103 69.9
Sopen06g022700 Solanum pennellii HOM05D004748 ORTHO05D005825 1.3e-32 144.1 103 69.9
Lsat_1_v5_gn_5_137380 Lactuca sativa HOM05D004748 ORTHO05D005825 1.7e-32 143.7 117 65.8
Nitab4.5_0002661g0120 Nicotiana tabacum HOM05D004748 ORTHO05D005825 1.7e-32 143.7 189 47.1
Peaxi162Scf00207g01631 Petunia axillaris HOM05D004748 ORTHO05D005825 1.7e-32 143.7 105 69.5
HanXRQChr10g0311461 Helianthus annuus HOM05D004748 ORTHO05D005825 2.3e-32 143.3 147 56.5
Lj9C541G21 Lonicera japonica HOM05D004748 ORTHO05D001811 3.9e-32 142.5 87 80.5
Aqoxy7G02343 Aquilegia oxysepala HOM05D004748 ORTHO05D005825 6.6e-32 141.7 181 50.8
DCAR_022622 Daucus carota HOM05D004748 ORTHO05D005825 1.1e-31 141.0 143 55.9
Migut.I01182 Erythranthe guttata HOM05D004748 ORTHO05D005825 2.5e-31 139.8 136 58.8
Cc04_g00320 Coffea canephora HOM05D004748 ORTHO05D005825 7.3e-31 138.3 90 78.9
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 1.6e-30 137.1 84 82.1
Os04g0298200 Oryza sativa ssp. japonica HOM05D004748 ORTHO05D005825 2.8e-30 136.3 92 73.9
Rhsim12G0214600 Rhododendron simsii HOM05D004748 ORTHO05D005825 4.8e-30 135.6 126 59.5
TAR625G1093 Trochodendron aralioides HOM05D004748 ORTHO05D005825 4.8e-30 135.6 95 73.7
Nn8g40686 Nelumbo nucifera HOM05D004748 ORTHO05D005825 1.1e-29 134.4 76 88.2
CDE07G1729 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 1.8e-29 133.7 103 68.0
Zm00001eb086340 Zea mays HOM05D004748 ORTHO05D005825 1.8e-29 133.7 195 47.7
MBI14_g10723_MAGBIO Magnolia biondii HOM05D004748 ORTHO05D005825 3.1e-29 132.9 89 77.5
Zm00001eb420390 Zea mays HOM05D004748 ORTHO05D005825 4.0e-29 132.5 92 71.7
SGA_v2.0_scaffold71G24004 Striga asiatica HOM05D004748 ORTHO05D005825 1.5e-28 130.6 92 72.8
Atru.chr1.2705 Acer truncatum HOM05D004748 ORTHO05D005825 2.6e-28 129.8 101 68.3
CDE04G0266 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 3.4e-28 129.4 96 68.8
vmacro17059 Vaccinium macrocarpon HOM05D004748 ORTHO05D005825 5.8e-28 128.6 157 49.7
GSVIVG01029603001 Vitis vinifera HOM05D004748 ORTHO05D005825 9.9e-28 127.9 64 98.4
Hma1.2p1_0517F.1_g170670 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 2.9e-27 126.3 75 81.3
PSO170G5564 Papaver somniferum HOM05D004748 ORTHO05D005825 3.8e-27 125.9 97 69.1
PSO017G2012 Papaver somniferum HOM05D004748 ORTHO05D005825 6.4e-27 125.2 83 77.1
HPP92_026143 Vanilla planifolia HOM05D004748 ORTHO05D005825 1.1e-26 124.4 83 75.9
ATR0580G210 Amborella trichopoda HOM05D004748 ORTHO05D005825 1.4e-26 124.0 70 85.7
A05p19500 Brassica napus HOM05D004748 ORTHO05D005825 1.9e-26 123.6 70 85.7
MELO3C024289.2 Cucumis melo HOM05D004748 ORTHO05D005825 1.9e-26 123.6 75 81.3
AagrBONN_evm.TU.Sc2ySwM_344.1578 Anthoceros agrestis HOM05D004748 ORTHO05D005825 1.8e-24 117.1 71 80.3
Nitab4.5_0001691g0140 Nicotiana tabacum HOM05D004748 ORTHO05D005825 3.9e-24 115.9 106 58.5
SHI31092 Sapria himalayana HOM05D004748 ORTHO05D005825 1.5e-23 114.0 64 87.5
Mapoly0185s0006 Marchantia polymorpha HOM05D004748 ORTHO05D005825 7.4e-23 111.7 71 74.6
Pp3c20_1650 Physcomitrium patens HOM05D004748 ORTHO05D005825 9.6e-23 111.3 71 78.9
SEGI_05538 Sequoiadendron giganteum HOM05D004748 ORTHO05D005825 4.8e-22 109.0 62 83.9
SMO228G0169 Selaginella moellendorffii HOM05D004748 ORTHO05D005825 1.1e-21 107.8 70 75.7
Nitab4.5_0012506g0020 Nicotiana tabacum HOM05D004748 ORTHO05D005825 2.4e-21 106.7 89 65.2
Hund05683 Selenicereus undatus HOM05D004748 ORTHO05D005825 2.6e-20 103.2 70 77.1
BcaB04g17188 Brassica carinata HOM05D001232 ORTHO05D001073 5.8e-20 102.1 68 73.5
Nitab4.5_0003757g0030 Nicotiana tabacum HOM05D004748 ORTHO05D005825 5.1e-16 89.0 134 43.3
CAN.G308.5 Capsicum annuum HOM05D004748 ORTHO05D005825 8.4e-11 71.6 40 90.0
FAN02G0724 Fragaria x ananassa HOM05D004748 ORTHO05D005825 4.2e-10 69.3 40 85.0
GSVIVG01029622001 Vitis vinifera HOM05D004748 ORTHO05D005825 7.1e-10 68.6 34 100.0
Lj5A24T50 Lonicera japonica HOM05D004748 ORTHO05D005825 1.2e-09 67.8 35 91.4
Actinidia00641 Actinidia chinensis HOM05D004748 ORTHO05D005825 6.0e-09 65.5 40 82.5
SEGI_11704 Sequoiadendron giganteum HOM05D004748 ORTHO05D006250 6.0e-09 65.5 37 81.1
HanXRQChr12g0383231 Helianthus annuus HOM05D002835 ORTHO05D003008 3.0e-08 63.2 59 57.6
Peaxi162Scf00038g02524 Petunia axillaris HOM05D004748 ORTHO05D005825 1.1e-07 61.2 40 75.0
PRCOL_00004355 Prasinoderma coloniale HOM05D004748 ORTHO05D005825 4.3e-07 59.3 70 51.4
MCO14G368 Micromonas commoda HOM05D004748 ORTHO05D005825 6.3e-06 55.5 62 46.8


User provided reference genes

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