Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029603001 Vitis vinifera HOM05D004748 ORTHO05D005825 5.0e-31 137.1 68 100.0
GSVIVG01029613001 Vitis vinifera HOM05D004748 ORTHO05D005825 1.4e-28 129.0 64 98.4
GSVIVG01029626001 Vitis vinifera HOM05D004748 ORTHO05D005825 1.4e-28 129.0 64 98.4
CSS0006652 Camellia sinensis var. sinensis HOM05D004748 ORTHO05D005825 2.0e-27 125.2 64 95.3
Phvul.008G254900 Phaseolus vulgaris HOM05D004748 ORTHO05D005825 2.6e-27 124.8 64 93.8
Dinv20350 Davidia involucrata HOM05D004748 ORTHO05D005825 3.3e-27 124.4 64 93.8
TWI12G1435 Tripterygium wilfordii HOM05D004748 ORTHO05D005825 3.3e-27 124.4 64 95.3
Nn8g40686 Nelumbo nucifera HOM05D004748 ORTHO05D005825 4.4e-27 124.0 64 93.8
Lj3g0017034 Lotus japonicus HOM05D004748 ORTHO05D005825 5.7e-27 123.6 64 93.8
CANSAT01G3164 Cannabis sativa HOM05D004748 ORTHO05D005825 9.7e-27 122.9 64 92.2
Cpa.g.sc67.6 Carica papaya HOM05D004748 ORTHO05D005825 9.7e-27 122.9 64 92.2
Glyma.07G020100 Glycine max HOM05D004748 ORTHO05D005825 9.7e-27 122.9 64 92.2
Glyma.08G222000 Glycine max HOM05D004748 ORTHO05D005825 9.7e-27 122.9 64 92.2
Medtr4g008150 Medicago truncatula HOM05D004748 ORTHO05D005825 9.7e-27 122.9 64 92.2
Sc12g0011080 Simmondsia chinensis HOM05D004748 ORTHO05D005825 9.7e-27 122.9 64 93.8
SGA_v2.0_scaffold71G24004 Striga asiatica HOM05D004748 ORTHO05D005825 9.7e-27 122.9 64 92.2
TPR.G15725 Trifolium pratense HOM05D004748 ORTHO05D005825 9.7e-27 122.9 64 92.2
VMungo0647G1450 Vigna mungo HOM05D004748 ORTHO05D005825 9.7e-27 122.9 64 92.2
CiPaw.01G089000 Carya illinoinensis HOM05D004748 ORTHO05D005825 1.3e-26 122.5 64 92.2
vmacro17059 Vaccinium macrocarpon HOM05D004748 ORTHO05D005825 1.3e-26 122.5 64 93.8
Cfa002138 Carpinus fangiana HOM05D004748 ORTHO05D005825 1.7e-26 122.1 64 92.2
Haze_16292 Corylus avellana HOM05D004748 ORTHO05D005825 1.7e-26 122.1 64 92.2
PGR102G1746 Punica granatum HOM05D004748 ORTHO05D005825 1.7e-26 122.1 64 92.2
AUR62001358 Chenopodium quinoa HOM05D004748 ORTHO05D005825 2.2e-26 121.7 64 89.1
AUR62025643 Chenopodium quinoa HOM05D004748 ORTHO05D005825 2.2e-26 121.7 64 89.1
CsaV3_7G033760 Cucumis sativus L. HOM05D004748 ORTHO05D005825 2.2e-26 121.7 64 92.2
Hma1.2p1_0517F.1_g170670 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 2.2e-26 121.7 65 89.2
Manes.03G081362 Manihot esculenta HOM05D004748 ORTHO05D005825 2.2e-26 121.7 64 92.2
Psat7g261000 Pisum sativum HOM05D004748 ORTHO05D005825 2.2e-26 121.7 64 90.6
Ca_20497_v3 Cicer arietinum L. HOM05D004748 ORTHO05D005825 2.8e-26 121.3 64 90.6
Duzib192G0179 Durio zibethinus HOM05D004748 ORTHO05D005825 2.8e-26 121.3 66 87.9
MD09G1160600 Malus domestica HOM05D004748 ORTHO05D005825 2.8e-26 121.3 64 90.6
MD17G1146400 Malus domestica HOM05D004748 ORTHO05D005825 2.8e-26 121.3 64 90.6
Sed0019048 Sechium edule HOM05D004748 ORTHO05D005825 2.8e-26 121.3 64 90.6
THA.LOC104816897 Tarenaya hassleriana HOM05D004748 ORTHO05D005825 2.8e-26 121.3 64 92.2
Actinidia31132 Actinidia chinensis HOM05D004748 ORTHO05D005825 3.7e-26 120.9 64 92.2
ClCG09G001570 Citrullus lanatus HOM05D004748 ORTHO05D005825 3.7e-26 120.9 64 90.6
Gohir.A06G115900 Gossypium hirsutum HOM05D004748 ORTHO05D005825 3.7e-26 120.9 64 90.6
Gorai.010G141000 Gossypium raimondii HOM05D004748 ORTHO05D005825 3.7e-26 120.9 64 90.6
Lalb_Chr04g0264641 Lupinus albus HOM05D004748 ORTHO05D005825 3.7e-26 120.9 64 90.6
Duzib235G0633 Durio zibethinus HOM05D004748 ORTHO05D005825 4.8e-26 120.6 64 90.6
ATR0580G210 Amborella trichopoda HOM05D004748 ORTHO05D005825 6.3e-26 120.2 67 85.1
Hma1.2p1_0517F.1_g170660 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 6.3e-26 120.2 64 89.1
Os04g0298200 Oryza sativa ssp. japonica HOM05D004748 ORTHO05D005825 6.3e-26 120.2 64 89.1
Prupe.3G019200 Prunus persica HOM05D004748 ORTHO05D005825 6.3e-26 120.2 64 89.1
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 6.3e-26 120.2 63 92.1
Aa31LG10G3160 Aethionema arabicum HOM05D004748 ORTHO05D005825 8.2e-26 119.8 64 89.1
EL10Ac7g18182 Beta vulgaris HOM05D004748 ORTHO05D005825 8.2e-26 119.8 64 90.6
Gohir.D06G120700 Gossypium hirsutum HOM05D004748 ORTHO05D005825 8.2e-26 119.8 64 89.1
Potri.010G251300 Populus trichocarpa HOM05D004748 ORTHO05D005825 8.2e-26 119.8 64 89.1
Rhsim12G0214600 Rhododendron simsii HOM05D004748 ORTHO05D005825 8.2e-26 119.8 63 92.1
RcHm_v2.0_Chr2g0149771 Rosa chinensis HOM05D004748 ORTHO05D005825 8.2e-26 119.8 64 90.6
Ah.15g094390 Amaranthus hybridus HOM05D004748 ORTHO05D005825 1.1e-25 119.4 64 89.1
COL.COLO4_31191 Corchorus olitorius HOM05D004748 ORTHO05D005825 1.1e-25 119.4 64 89.1
Eucgr.F04020 Eucalyptus grandis HOM05D004748 ORTHO05D005825 1.1e-25 119.4 64 89.1
QL05p082110 Quercus lobata HOM05D004748 ORTHO05D005825 1.1e-25 119.4 64 89.1
CDE07G1729 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 1.8e-25 118.6 64 87.5
MBI14_g10723_MAGBIO Magnolia biondii HOM05D004748 ORTHO05D005825 1.8e-25 118.6 64 89.1
Thecc.06G061000 Theobroma cacao HOM05D004748 ORTHO05D005825 1.8e-25 118.6 63 90.5
TAR625G1093 Trochodendron aralioides HOM05D004748 ORTHO05D005825 1.8e-25 118.6 64 89.1
AL1G59520 Arabidopsis lyrata HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
AT1G51610 Arabidopsis thaliana HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
BcaB02g11258 Brassica carinata HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
BcaB07g33612 Brassica carinata HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
BcaC08g43322 Brassica carinata HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
BcaC08g43922 Brassica carinata HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
A05p19500 Brassica napus HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
A06p02380 Brassica napus HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
C06p06730 Brassica napus HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
BolC6t35782H Brassica oleracea HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
BolC6t36471H Brassica oleracea HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
BraA05t20854Z Brassica rapa HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
BraA06t23445Z Brassica rapa HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
Carub.0001s4046 Capsella rubella HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
CARHR041760 Cardamine hirsuta HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
ECA234G0898 Erigeron canadensis HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
Thhalv10011469m.g Eutrema salsugineum HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
FvH4_6g37160 Fragaria vesca HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 89.1
FAN09G1322 Fragaria x ananassa HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 89.1
FAN14G2305 Fragaria x ananassa HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 89.1
Sabra10G0195200 Salix brachista HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
Sp1g38250 Schrenkiella parvula HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 87.5
Hund18602 Selenicereus undatus HOM05D004748 ORTHO05D005825 2.4e-25 118.2 64 89.1
Solyc06g063250.3 Solanum lycopersicum HOM05D004748 ORTHO05D005825 2.4e-25 118.2 63 90.5
Sopen06g022700 Solanum pennellii HOM05D004748 ORTHO05D005825 2.4e-25 118.2 63 90.5
PGSC0003DMG400026506 Solanum tuberosum HOM05D004748 ORTHO05D005825 2.4e-25 118.2 63 90.5
FAN05G0392 Fragaria x ananassa HOM05D004748 ORTHO05D005825 3.1e-25 117.9 64 89.1
FAN05G2438 Fragaria x ananassa HOM05D004748 ORTHO05D005825 3.1e-25 117.9 64 89.1
Lj9C541G21 Lonicera japonica HOM05D004748 ORTHO05D001811 3.1e-25 117.9 63 88.9
Migut.I01182 Erythranthe guttata HOM05D004748 ORTHO05D005825 4.1e-25 117.5 63 88.9
HanXRQChr10g0311461 Helianthus annuus HOM05D004748 ORTHO05D005825 4.1e-25 117.5 64 85.9
Aqoxy7G02343 Aquilegia oxysepala HOM05D004748 ORTHO05D005825 5.3e-25 117.1 64 87.5
Nitab4.5_0002661g0120 Nicotiana tabacum HOM05D004748 ORTHO05D005825 5.3e-25 117.1 63 88.9
Peaxi162Scf00207g01631 Petunia axillaris HOM05D004748 ORTHO05D005825 5.3e-25 117.1 63 88.9
Zm00001eb086340 Zea mays HOM05D004748 ORTHO05D005825 5.3e-25 117.1 64 85.9
Ciclev10025586m.g Citrus clementina HOM05D004748 ORTHO05D005825 7.0e-25 116.7 64 90.6
HPP92_026143 Vanilla planifolia HOM05D004748 ORTHO05D005825 7.0e-25 116.7 65 84.6
Zm00001eb420390 Zea mays HOM05D004748 ORTHO05D005825 7.0e-25 116.7 64 85.9
CDE04G0266 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 9.1e-25 116.3 64 85.9
Cc04_g00320 Coffea canephora HOM05D004748 ORTHO05D005825 9.1e-25 116.3 63 88.9
DCAR_022622 Daucus carota HOM05D004748 ORTHO05D005825 1.2e-24 115.9 63 85.7
arahy.Tifrunner.gnm1.ann1.2A2X48 Arachis hypogaea HOM05D004748 ORTHO05D005825 1.6e-24 115.5 64 89.1
arahy.Tifrunner.gnm1.ann1.660VQ8 Arachis hypogaea HOM05D004748 ORTHO05D005825 1.6e-24 115.5 64 89.1
MSTRG.10889 Avicennia marina HOM05D004748 ORTHO05D005825 1.6e-24 115.5 63 88.9
MELO3C024289.2 Cucumis melo HOM05D004748 ORTHO05D005825 1.6e-24 115.5 60 93.3
Lsat_1_v5_gn_5_137380 Lactuca sativa HOM05D004748 ORTHO05D005825 5.9e-24 113.6 64 84.4
PSO017G2012 Papaver somniferum HOM05D004748 ORTHO05D005825 7.7e-24 113.2 64 84.4
PSO170G5564 Papaver somniferum HOM05D004748 ORTHO05D005825 7.7e-24 113.2 64 84.4
SHI31092 Sapria himalayana HOM05D004748 ORTHO05D005825 5.0e-23 110.5 63 85.7
AagrBONN_evm.TU.Sc2ySwM_344.1578 Anthoceros agrestis HOM05D004748 ORTHO05D005825 8.5e-23 109.8 64 82.8
Mapoly0185s0006 Marchantia polymorpha HOM05D004748 ORTHO05D005825 3.2e-22 107.8 64 79.7
Atru.chr1.2705 Acer truncatum HOM05D004748 ORTHO05D005825 4.2e-22 107.5 64 84.4
SMO228G0169 Selaginella moellendorffii HOM05D004748 ORTHO05D005825 6.1e-21 103.6 64 78.1
Nitab4.5_0001691g0140 Nicotiana tabacum HOM05D004748 ORTHO05D005825 8.0e-21 103.2 66 75.8
SEGI_05538 Sequoiadendron giganteum HOM05D004748 ORTHO05D005825 8.0e-21 103.2 56 85.7
Pp3c20_1650 Physcomitrium patens HOM05D004748 ORTHO05D005825 1.0e-20 102.8 64 79.7
Nitab4.5_0012506g0020 Nicotiana tabacum HOM05D004748 ORTHO05D005825 6.8e-20 100.1 62 79.0
Hund05683 Selenicereus undatus HOM05D004748 ORTHO05D005825 6.8e-20 100.1 62 79.0
BcaB04g17188 Brassica carinata HOM05D001232 ORTHO05D001073 1.2e-11 72.8 50 72.0
Nitab4.5_0003757g0030 Nicotiana tabacum HOM05D004748 ORTHO05D005825 1.2e-11 72.8 38 92.1
GSVIVG01029622001 Vitis vinifera HOM05D004748 ORTHO05D005825 4.8e-10 67.4 34 97.1
CAN.G308.5 Capsicum annuum HOM05D004748 ORTHO05D005825 1.4e-09 65.9 34 94.1
SEGI_11704 Sequoiadendron giganteum HOM05D004748 ORTHO05D006250 2.4e-09 65.1 37 81.1
Lj5A24T50 Lonicera japonica HOM05D004748 ORTHO05D005825 5.4e-09 63.9 34 88.2
FAN02G0724 Fragaria x ananassa HOM05D004748 ORTHO05D005825 7.0e-09 63.5 34 88.2
Actinidia00641 Actinidia chinensis HOM05D004748 ORTHO05D005825 9.1e-09 63.2 34 88.2
HanXRQChr12g0383231 Helianthus annuus HOM05D002835 ORTHO05D003008 4.5e-08 60.8 37 73.0
Peaxi162Scf00038g02524 Petunia axillaris HOM05D004748 ORTHO05D005825 8.6e-07 56.6 34 76.5
PRCOL_00004355 Prasinoderma coloniale HOM05D004748 ORTHO05D005825 1.5e-06 55.8 66 50.0


User provided reference genes

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