Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029476001 Vitis vinifera HOM05D000309 ORTHO05D439731 1.4e-14 81.6 37 100.0
GSVIVG01029510001 Vitis vinifera HOM05D000309 ORTHO05D000271 6.5e-09 62.8 33 75.8
GSVIVG01029518001 Vitis vinifera HOM05D000309 ORTHO05D000271 1.6e-07 58.2 33 69.7
Ciclev10031967m.g Citrus clementina HOM05D000309 ORTHO05D000271 2.1e-07 57.8 33 69.7
Hma1.2p1_0338F.1_g129680 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 3.6e-07 57.0 33 69.7
Ciclev10033368m.g Citrus clementina HOM05D000309 ORTHO05D000271 6.1e-07 56.2 33 66.7
QL05p084194 Quercus lobata HOM05D000309 ORTHO05D000271 6.1e-07 56.2 33 66.7
AL2G25240 Arabidopsis lyrata HOM05D000309 ORTHO05D000271 7.9e-07 55.8 33 63.6
Ciclev10013952m.g Citrus clementina HOM05D000309 ORTHO05D000271 1.0e-06 55.5 33 66.7
SGA_v2.0_scaffold43G16360 Striga asiatica HOM05D000309 ORTHO05D000271 1.0e-06 55.5 33 63.6
Thecc.06G036900 Theobroma cacao HOM05D000309 ORTHO05D000271 1.0e-06 55.5 33 66.7
Ciclev10033377m.g Citrus clementina HOM05D000309 ORTHO05D000271 1.4e-06 55.1 33 63.6
Medtr8g017020 Medicago truncatula HOM05D000309 ORTHO05D000271 1.8e-06 54.7 33 63.6
Potri.001G049100 Populus trichocarpa HOM05D000309 ORTHO05D000271 1.8e-06 54.7 33 66.7
QL05p084311 Quercus lobata HOM05D000309 ORTHO05D000271 1.8e-06 54.7 33 63.6
Thecc.06G036800 Theobroma cacao HOM05D000309 ORTHO05D000271 1.8e-06 54.7 33 66.7
Cfa021987 Carpinus fangiana HOM05D000309 ORTHO05D000271 2.3e-06 54.3 33 63.6
Gorai.010G223500 Gossypium raimondii HOM05D000309 ORTHO05D000271 2.3e-06 54.3 33 66.7
HanXRQChr13g0414221 Helianthus annuus HOM05D000309 ORTHO05D000271 2.3e-06 54.3 33 66.7
Phvul.006G194200 Phaseolus vulgaris HOM05D000309 ORTHO05D000271 2.3e-06 54.3 33 57.6
AUR62025698 Chenopodium quinoa HOM05D000309 ORTHO05D000271 3.0e-06 53.9 33 63.6
Duzib235G1399 Durio zibethinus HOM05D000309 ORTHO05D000271 3.0e-06 53.9 32 68.8
Lsat_1_v5_gn_3_19140 Lactuca sativa HOM05D000309 ORTHO05D000271 3.0e-06 53.9 33 60.6
Sabra01G0034100 Salix brachista HOM05D000309 ORTHO05D000271 3.0e-06 53.9 33 63.6
VMungo0540G2349 Vigna mungo HOM05D000309 ORTHO05D000271 3.0e-06 53.9 33 60.6
Atru.chr12.1752 Acer truncatum HOM05D000309 ORTHO05D000271 3.9e-06 53.5 33 63.6
C03p59010 Brassica napus HOM05D000309 ORTHO05D000271 3.9e-06 53.5 33 60.6
CAN.G594.2 Capsicum annuum HOM05D000309 ORTHO05D000271 3.9e-06 53.5 33 60.6
Cfa010800 Carpinus fangiana HOM05D000309 ORTHO05D000271 3.9e-06 53.5 33 63.6
CiPaw.01G094500 Carya illinoinensis HOM05D000309 ORTHO05D000271 3.9e-06 53.5 33 63.6
QL05p065780 Quercus lobata HOM05D000309 ORTHO05D000271 3.9e-06 53.5 33 63.6
QL05p066125 Quercus lobata HOM05D000309 ORTHO05D000271 3.9e-06 53.5 33 63.6
Thecc.06G037300 Theobroma cacao HOM05D000309 ORTHO05D000271 3.9e-06 53.5 33 63.6
AT1G78960 Arabidopsis thaliana HOM05D000309 ORTHO05D000271 5.1e-06 53.1 33 60.6
MSTRG.28263 Avicennia marina HOM05D000309 ORTHO05D000271 5.1e-06 53.1 33 66.7
CARHR072630 Cardamine hirsuta HOM05D000309 ORTHO05D000271 5.1e-06 53.1 34 58.8
ECA240G0559 Erigeron canadensis HOM05D000309 ORTHO05D000271 5.1e-06 53.1 33 66.7
TWI31G1052 Tripterygium wilfordii HOM05D000309 ORTHO05D000271 5.1e-06 53.1 33 63.6
GSVIVG01029488001 Vitis vinifera HOM05D000309 ORTHO05D000271 5.1e-06 53.1 33 63.6
GSVIVG01029491001 Vitis vinifera HOM05D000309 ORTHO05D000271 5.1e-06 53.1 33 63.6
GSVIVG01029508001 Vitis vinifera HOM05D000309 ORTHO05D000271 5.1e-06 53.1 33 63.6
Ciclev10033930m.g Citrus clementina HOM05D000309 ORTHO05D000271 6.7e-06 52.8 33 60.6
Haze_03165 Corylus avellana HOM05D000309 ORTHO05D000271 6.7e-06 52.8 33 60.6
Phvul.006G156000 Phaseolus vulgaris HOM05D000309 ORTHO05D000271 6.7e-06 52.8 33 60.6
Phvul.006G156500 Phaseolus vulgaris HOM05D000309 ORTHO05D000271 6.7e-06 52.8 33 60.6
AL2G39410 Arabidopsis lyrata HOM05D000309 ORTHO05D000271 8.8e-06 52.4 33 60.6
Cc01_g12310 Coffea canephora HOM05D000309 ORTHO05D000271 8.8e-06 52.4 33 60.6
Migut.N01545 Erythranthe guttata HOM05D000309 ORTHO05D000271 8.8e-06 52.4 33 60.6
Thhalv10007055m.g Eutrema salsugineum HOM05D000309 ORTHO05D000271 8.8e-06 52.4 33 63.6
HanXRQChr03g0083231 Helianthus annuus HOM05D000309 ORTHO05D000271 8.8e-06 52.4 33 57.6
Oeu015358.1 Olea europaea HOM05D000309 ORTHO05D000271 8.8e-06 52.4 33 63.6
Peaxi162Scf00436g00122 Petunia axillaris HOM05D000309 ORTHO05D000271 8.8e-06 52.4 33 57.6
Phvul.006G156600 Phaseolus vulgaris HOM05D000309 ORTHO05D000271 8.8e-06 52.4 33 60.6


User provided reference genes

Program Settings