Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029463001 Vitis vinifera HOM05D001640 ORTHO05D001612 8.2e-45 183.3 92 100.0
TAR626G0635 Trochodendron aralioides HOM05D001640 ORTHO05D001612 7.5e-14 80.5 86 52.3
GSVIVG01014428001 Vitis vinifera HOM05D001640 ORTHO05D001612 4.1e-12 74.7 51 72.5
Dinv08340 Davidia involucrata HOM05D001640 ORTHO05D001612 2.0e-11 72.4 73 52.1
Sabra11G0030500 Salix brachista HOM05D001640 ORTHO05D001612 1.7e-10 69.3 89 47.2
MBI02_g35911_MAGBIO Magnolia biondii HOM05D001640 ORTHO05D001612 2.3e-10 68.9 70 45.7
TWI38G0775 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 2.9e-10 68.6 77 45.5
TAR627G0359 Trochodendron aralioides HOM05D001640 ORTHO05D001612 3.8e-10 68.2 82 45.1
Aqoxy1G02755 Aquilegia oxysepala HOM05D001640 ORTHO05D001612 5.0e-10 67.8 75 50.7
PSO063G3696 Papaver somniferum HOM05D001640 ORTHO05D001612 1.1e-09 66.6 86 47.7
Manes.16G021700 Manihot esculenta HOM05D001640 ORTHO05D001612 1.5e-09 66.2 76 42.1
Nn1g06744 Nelumbo nucifera HOM05D001640 ORTHO05D001612 1.5e-09 66.2 77 46.8
QL05p081827 Quercus lobata HOM05D001640 ORTHO05D001612 1.9e-09 65.9 82 45.1
PSO675G3502 Papaver somniferum HOM05D001640 ORTHO05D001612 4.3e-09 64.7 73 45.2
PSO832G1914 Papaver somniferum HOM05D001640 ORTHO05D001612 4.3e-09 64.7 71 49.3
Potri.011G044000 Populus trichocarpa HOM05D001640 ORTHO05D001612 5.6e-09 64.3 77 45.5
CSS0030521 Camellia sinensis var. sinensis HOM05D001640 ORTHO05D001612 2.8e-08 62.0 68 47.1
Dinv22367 Davidia involucrata HOM05D001640 ORTHO05D001612 2.8e-08 62.0 76 44.7
Actinidia01931 Actinidia chinensis HOM05D001640 ORTHO05D001612 3.6e-08 61.6 77 42.9
Hma1.2p1_0144F.1_g064810 Hydrangea macrophylla HOM05D001640 ORTHO05D001612 3.6e-08 61.6 74 47.3
Actinidia05587 Actinidia chinensis HOM05D001640 ORTHO05D001612 4.7e-08 61.2 80 45.0
ATR0693G217 Amborella trichopoda HOM05D001640 ORTHO05D001612 6.1e-08 60.8 78 44.9
Manes.17G040000 Manihot esculenta HOM05D001640 ORTHO05D001612 8.0e-08 60.5 77 41.6
Eucgr.E03446 Eucalyptus grandis HOM05D001640 ORTHO05D001612 1.0e-07 60.1 73 49.3
AUR62015603 Chenopodium quinoa HOM05D001640 ORTHO05D001612 1.8e-07 59.3 80 41.2
HanXRQChr11g0330851 Helianthus annuus HOM05D001640 ORTHO05D001612 1.8e-07 59.3 80 40.0
HPP92_012352 Vanilla planifolia HOM05D001640 ORTHO05D001612 1.8e-07 59.3 81 45.7
Ah.04g165430 Amaranthus hybridus HOM05D001640 ORTHO05D001612 2.3e-07 58.9 75 48.0
AUR62029314 Chenopodium quinoa HOM05D001640 ORTHO05D001612 4.0e-07 58.2 79 45.6
RcHm_v2.0_Chr5g0006611 Rosa chinensis HOM05D001640 ORTHO05D001612 6.8e-07 57.4 68 45.6
CiPaw.11G176400 Carya illinoinensis HOM05D001640 ORTHO05D001612 8.9e-07 57.0 79 46.8
CDE02G2367 Ceratophyllum demersum HOM05D001640 ORTHO05D001612 8.9e-07 57.0 79 41.8
MSTRG.15208 Avicennia marina HOM05D001640 ORTHO05D001612 1.2e-06 56.6 72 45.8
Manes.03G116400 Manihot esculenta HOM05D001640 ORTHO05D001612 1.2e-06 56.6 75 46.7
Lj2A282T46 Lonicera japonica HOM05D001640 ORTHO05D001612 1.5e-06 56.2 72 44.4
Migut.M00878 Erythranthe guttata HOM05D001640 ORTHO05D001612 2.0e-06 55.8 72 47.2
SGA_v2.0_scaffold73G24316 Striga asiatica HOM05D001640 ORTHO05D001612 2.0e-06 55.8 74 45.9
AL1G22250 Arabidopsis lyrata HOM05D001640 ORTHO05D001612 3.4e-06 55.1 81 42.0
Cpa.g.sc27.111 Carica papaya HOM05D001640 ORTHO05D001612 3.4e-06 55.1 75 44.0
FAN16G3443 Fragaria x ananassa HOM05D001640 ORTHO05D001612 4.4e-06 54.7 76 40.8
FAN21G3900 Fragaria x ananassa HOM05D001640 ORTHO05D001612 4.4e-06 54.7 76 40.8
Potri.004G035700 Populus trichocarpa HOM05D001640 ORTHO05D001612 4.4e-06 54.7 74 41.9
Ah.06g183580 Amaranthus hybridus HOM05D001640 ORTHO05D001612 7.5e-06 53.9 85 43.5
Nn1g03919 Nelumbo nucifera HOM05D001640 ORTHO05D001612 7.5e-06 53.9 50 54.0
Os07g0563400 Oryza sativa ssp. japonica HOM05D001640 ORTHO05D001612 9.8e-06 53.5 80 45.0
Zm00001eb324310 Zea mays HOM05D001640 ORTHO05D001612 9.8e-06 53.5 81 40.7


User provided reference genes

Program Settings