Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029450001 Vitis vinifera HOM05D000836 ORTHO05D015686 9.7e-43 176.4 89 100.0
GSVIVG01028646001 Vitis vinifera HOM05D000836 ORTHO05D000709 1.4e-12 76.3 52 78.8
GSVIVG01026712001 Vitis vinifera HOM05D000836 ORTHO05D015686 3.7e-10 68.2 51 72.5
MSTRG.21421 Avicennia marina HOM05D000836 ORTHO05D000709 1.1e-09 66.6 53 73.6
TAR636G0232 Trochodendron aralioides HOM05D000836 ORTHO05D000709 1.1e-09 66.6 46 73.9
vmacro14755 Vaccinium macrocarpon HOM05D000836 ORTHO05D000709 1.4e-09 66.2 52 67.3
Gohir.A03G093900 Gossypium hirsutum HOM05D000836 ORTHO05D000709 1.8e-09 65.9 44 75.0
PSO170G6221 Papaver somniferum HOM05D000836 ORTHO05D000709 2.4e-09 65.5 44 75.0
PSO674G0107 Papaver somniferum HOM05D000836 ORTHO05D000709 2.4e-09 65.5 44 75.0
Prupe.8G203500 Prunus persica HOM05D000836 ORTHO05D000709 2.4e-09 65.5 53 73.6
Thecc.01G226600 Theobroma cacao HOM05D000836 ORTHO05D000709 5.4e-09 64.3 53 69.8
Thecc.04G205800 Theobroma cacao HOM05D000836 ORTHO05D000709 5.4e-09 64.3 42 76.2
Gohir.D02G123100 Gossypium hirsutum HOM05D000836 ORTHO05D000709 9.2e-09 63.5 44 72.7
Gorai.005G131200 Gossypium raimondii HOM05D000836 ORTHO05D000709 9.2e-09 63.5 44 72.7
Oeu009725.1 Olea europaea HOM05D000836 ORTHO05D000709 9.2e-09 63.5 53 71.7
Actinidia37590 Actinidia chinensis HOM05D000836 ORTHO05D000709 1.2e-08 63.2 53 71.7
FAN27G2627 Fragaria x ananassa HOM05D000836 ORTHO05D000709 1.2e-08 63.2 53 67.9
Nitab4.5_0000045g0120 Nicotiana tabacum HOM05D000836 ORTHO05D000709 1.2e-08 63.2 55 63.6
Nitab4.5_0006192g0020 Nicotiana tabacum HOM05D000836 ORTHO05D000709 1.2e-08 63.2 55 63.6
QL09p054646 Quercus lobata HOM05D000836 ORTHO05D000709 1.2e-08 63.2 53 69.8
Lalb_Chr12g0209701 Lupinus albus HOM05D000836 ORTHO05D000709 2.7e-08 62.0 45 71.1
arahy.Tifrunner.gnm1.ann1.050HUA Arachis hypogaea HOM05D000836 ORTHO05D000709 3.5e-08 61.6 51 66.7
arahy.Tifrunner.gnm1.ann1.HW9H1V Arachis hypogaea HOM05D000836 ORTHO05D000709 3.5e-08 61.6 51 66.7
Duzib268G1331 Durio zibethinus HOM05D000836 ORTHO05D000709 3.5e-08 61.6 42 73.8
FvH4_2g19160 Fragaria vesca HOM05D000836 ORTHO05D000709 3.5e-08 61.6 53 66.0
FAN15G3190 Fragaria x ananassa HOM05D000836 ORTHO05D000709 3.5e-08 61.6 53 66.0
FAN24G1148 Fragaria x ananassa HOM05D000836 ORTHO05D000709 3.5e-08 61.6 53 66.0
Manes.13G045500 Manihot esculenta HOM05D000836 ORTHO05D000709 3.5e-08 61.6 51 70.6
Potri.002G241800 Populus trichocarpa HOM05D000836 ORTHO05D000709 3.5e-08 61.6 51 68.6
Sabra02G0184200 Salix brachista HOM05D000836 ORTHO05D000709 3.5e-08 61.6 51 68.6
CAN.G122.3 Capsicum annuum HOM05D000836 ORTHO05D000709 4.5e-08 61.2 51 68.6
MBI07_g31313_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D000709 4.5e-08 61.2 51 66.7
Ca_07520_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000709 5.9e-08 60.8 49 67.3
Potri.001G049400 Populus trichocarpa HOM05D000836 ORTHO05D000709 5.9e-08 60.8 44 70.5
Peaxi162Scf00517g00513 Petunia axillaris HOM05D000836 ORTHO05D000709 7.8e-08 60.5 53 67.9
RcHm_v2.0_Chr6g0284941 Rosa chinensis HOM05D000836 ORTHO05D000709 7.8e-08 60.5 53 66.0
Sc17g0002390 Simmondsia chinensis HOM05D000836 ORTHO05D000709 7.8e-08 60.5 52 67.3
Solyc09g061290.3 Solanum lycopersicum HOM05D000836 ORTHO05D000709 7.8e-08 60.5 51 68.6
PGSC0003DMG400017653 Solanum tuberosum HOM05D000836 ORTHO05D000709 7.8e-08 60.5 51 68.6
TWI36G1193 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 7.8e-08 60.5 51 68.6
Gorai.011G159400 Gossypium raimondii HOM05D000836 ORTHO05D000709 1.0e-07 60.1 44 65.9
Oeu022256.1 Olea europaea HOM05D000836 ORTHO05D000709 1.0e-07 60.1 53 64.2
SalBow2G2753 Salvia bowleyana HOM05D000836 ORTHO05D000709 1.0e-07 60.1 53 69.8
Sopen09g024030 Solanum pennellii HOM05D000836 ORTHO05D000709 1.0e-07 60.1 51 66.7
SGA_v2.0_scaffold1G00745 Striga asiatica HOM05D000836 ORTHO05D000709 1.0e-07 60.1 53 67.9
CiPaw.03G150200 Carya illinoinensis HOM05D000836 ORTHO05D000709 1.3e-07 59.7 53 64.2
Gohir.D10G142600 Gossypium hirsutum HOM05D000836 ORTHO05D000709 1.3e-07 59.7 42 69.0
MBI14_g46625_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 1.3e-07 59.7 41 70.7
MBI17_g25803_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 1.3e-07 59.7 41 70.7
CAN.G771.72 Capsicum annuum HOM05D000836 ORTHO05D000709 1.7e-07 59.3 53 66.0
Duzib133G0531 Durio zibethinus HOM05D000836 ORTHO05D000709 1.7e-07 59.3 53 66.0
Hma1.2p1_0351F.1_g132890 Hydrangea macrophylla HOM05D000836 ORTHO05D000709 1.7e-07 59.3 53 66.0
Oeu023090.1 Olea europaea HOM05D000836 ORTHO05D000709 1.7e-07 59.3 54 61.1
MBI19_g14800_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 2.3e-07 58.9 46 67.4
Nitab4.5_0012093g0010 Nicotiana tabacum HOM05D000836 ORTHO05D000709 2.9e-07 58.5 53 66.0
SGA_v2.0_scaffold8G04645 Striga asiatica HOM05D000836 ORTHO05D000709 2.9e-07 58.5 53 64.2
MBI15_g33600_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 3.9e-07 58.2 41 70.7
Solyc06g083460.4 Solanum lycopersicum HOM05D000836 ORTHO05D000709 3.9e-07 58.2 53 66.0
Sopen06g034840 Solanum pennellii HOM05D000836 ORTHO05D000709 3.9e-07 58.2 53 66.0
PGSC0003DMG400020093 Solanum tuberosum HOM05D000836 ORTHO05D000709 3.9e-07 58.2 53 66.0
Atru.chr4.1725 Acer truncatum HOM05D000836 ORTHO05D000709 5.0e-07 57.8 51 64.7
EL10Ac7g17827 Beta vulgaris HOM05D000836 ORTHO05D000709 5.0e-07 57.8 53 62.3
CAN.G625.42 Capsicum annuum HOM05D000836 ORTHO05D000709 5.0e-07 57.8 53 64.2
AUR62008907 Chenopodium quinoa HOM05D000836 ORTHO05D000709 5.0e-07 57.8 53 64.2
Migut.D00533 Erythranthe guttata HOM05D000836 ORTHO05D000709 5.0e-07 57.8 53 64.2
Lj1C85G3 Lonicera japonica HOM05D000836 ORTHO05D000709 5.0e-07 57.8 53 64.2
Lj2A1132G71 Lonicera japonica HOM05D000836 ORTHO05D000709 5.0e-07 57.8 53 64.2
Gohir.A07G201400 Gossypium hirsutum HOM05D000836 ORTHO05D000709 6.6e-07 57.4 53 66.0
Gohir.D07G207700 Gossypium hirsutum HOM05D000836 ORTHO05D000709 6.6e-07 57.4 53 66.0
Gorai.001G234100 Gossypium raimondii HOM05D000836 ORTHO05D000709 6.6e-07 57.4 53 66.0
Ah.08g214240 Amaranthus hybridus HOM05D000836 ORTHO05D000709 8.6e-07 57.0 43 67.4
Glyma.08G354500 Glycine max HOM05D000836 ORTHO05D000709 8.6e-07 57.0 50 64.0
Gohir.D10G159833 Gossypium hirsutum HOM05D000836 ORTHO05D015686 8.6e-07 57.0 42 66.7
Sed0006740 Sechium edule HOM05D000836 ORTHO05D000709 8.6e-07 57.0 51 60.8
Sc17g0002340 Simmondsia chinensis HOM05D000836 ORTHO05D000709 8.6e-07 57.0 38 76.3
Cc01_g17100 Coffea canephora HOM05D000836 ORTHO05D000709 1.1e-06 56.6 53 64.2
Glyma.18G171100 Glycine max HOM05D000836 ORTHO05D000709 1.1e-06 56.6 50 64.0
Gohir.D11G143800 Gossypium hirsutum HOM05D000836 ORTHO05D000709 1.1e-06 56.6 54 63.0
MD05G1176000 Malus domestica HOM05D000836 ORTHO05D000709 1.1e-06 56.6 53 66.0
Prupe.1G005100 Prunus persica HOM05D000836 ORTHO05D000709 1.1e-06 56.6 54 53.7
TWI73G0286 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 1.1e-06 56.6 39 71.8
unitig_8.g3756 Utricularia gibba HOM05D000836 ORTHO05D000709 1.1e-06 56.6 59 57.6
COL.COLO4_10279 Corchorus olitorius HOM05D000836 ORTHO05D000709 1.5e-06 56.2 41 68.3
Gohir.A11G137400 Gossypium hirsutum HOM05D000836 ORTHO05D000709 1.5e-06 56.2 56 60.7
MBI10_g18939_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D000709 1.5e-06 56.2 46 63.0
Peaxi162Scf00107g00176 Petunia axillaris HOM05D000836 ORTHO05D000709 1.5e-06 56.2 55 61.8
CsaV3_3G011040 Cucumis sativus L. HOM05D000836 ORTHO05D000709 1.9e-06 55.8 51 58.8
Eucgr.H00067 Eucalyptus grandis HOM05D000836 ORTHO05D000709 1.9e-06 55.8 43 60.5
Nn1g07846 Nelumbo nucifera HOM05D000836 ORTHO05D000709 1.9e-06 55.8 46 63.0
Psat3g144760 Pisum sativum HOM05D000836 ORTHO05D000709 1.9e-06 55.8 50 60.0
MSTRG.17552 Avicennia marina HOM05D000836 ORTHO05D000709 2.5e-06 55.5 53 62.3
CSS0023634 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 2.5e-06 55.5 49 67.3
CSS0049393 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 2.5e-06 55.5 49 67.3
MD05G1175800 Malus domestica HOM05D000836 ORTHO05D000709 2.5e-06 55.5 53 64.2
Gorai.007G154000 Gossypium raimondii HOM05D000836 ORTHO05D000709 3.3e-06 55.1 54 61.1
Lj1g0001170 Lotus japonicus HOM05D000836 ORTHO05D000709 3.3e-06 55.1 49 63.3
Duzib138G1320 Durio zibethinus HOM05D000836 ORTHO05D000709 4.3e-06 54.7 54 63.0
MD04G1005500 Malus domestica HOM05D000836 ORTHO05D000709 4.3e-06 54.7 50 60.0
Medtr7g058460 Medicago truncatula HOM05D000836 ORTHO05D000709 4.3e-06 54.7 52 55.8
Potri.003G178600 Populus trichocarpa HOM05D000836 ORTHO05D000709 4.3e-06 54.7 51 60.8
ClCG05G003390 Citrullus lanatus HOM05D000836 ORTHO05D000709 5.6e-06 54.3 49 59.2
MELO3C006318.2 Cucumis melo HOM05D000836 ORTHO05D000709 5.6e-06 54.3 49 59.2
Duzib151G0556 Durio zibethinus HOM05D000836 ORTHO05D000709 5.6e-06 54.3 42 66.7
Cpa.g.sc8.161 Carica papaya HOM05D000836 ORTHO05D000709 7.3e-06 53.9 50 64.0
Ciclev10004358m.g Citrus clementina HOM05D000836 ORTHO05D000709 7.3e-06 53.9 51 58.8
Phvul.008G125400 Phaseolus vulgaris HOM05D000836 ORTHO05D000709 7.3e-06 53.9 52 59.6
TAR365G0060 Trochodendron aralioides HOM05D000836 ORTHO05D000709 7.3e-06 53.9 52 61.5
Nn3g19956 Nelumbo nucifera HOM05D000836 ORTHO05D000709 9.5e-06 53.5 46 60.9
Psat6g130000 Pisum sativum HOM05D000836 ORTHO05D000709 9.5e-06 53.5 44 63.6
TPR.G20806 Trifolium pratense HOM05D000836 ORTHO05D000709 9.5e-06 53.5 49 57.1


User provided reference genes

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