Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 1.2e-160 570.1 368 100.0
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 2.8e-72 276.6 343 53.4
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 8.6e-69 265.0 300 58.3
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 1.2e-67 261.2 395 48.9
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 1.2e-65 254.6 377 51.7
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 1.3e-64 251.1 388 51.3
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 6.4e-64 248.8 401 48.9
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 1.1e-63 248.1 256 61.3
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 1.4e-63 247.7 400 50.0
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 3.2e-63 246.5 389 49.4
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 1.6e-62 244.2 441 45.6
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 2.0e-62 243.8 291 58.1
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 1.3e-61 241.1 288 55.9
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 1.2e-59 234.6 421 49.6
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 6.2e-59 232.3 311 55.6
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 8.0e-59 231.9 405 53.1
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 8.0e-59 231.9 347 53.9
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 5.2e-58 229.2 367 45.5
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 5.2e-58 229.2 367 45.5
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 6.8e-58 228.8 409 49.9
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 1.2e-57 228.0 309 55.7
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 1.2e-57 228.0 349 52.4
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 2.0e-57 227.3 295 55.9
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 2.0e-57 227.3 385 49.4
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 2.6e-57 226.9 385 55.1
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 2.6e-57 226.9 349 49.0
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 4.4e-57 226.1 302 54.6
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 4.4e-57 226.1 448 45.3
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 7.5e-57 225.3 314 49.4
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 1.3e-56 224.6 460 42.6
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 3.7e-56 223.0 354 47.5
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 3.7e-56 223.0 348 54.9
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 8.3e-56 221.9 297 58.6
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 1.1e-55 221.5 348 47.7
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 1.4e-55 221.1 376 49.5
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 9.2e-55 218.4 422 45.0
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 9.2e-55 218.4 413 46.0
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 1.6e-54 217.6 434 46.5
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 2.1e-54 217.2 313 50.8
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 2.7e-54 216.9 402 44.3
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 3.5e-54 216.5 383 47.5
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 6.0e-54 215.7 293 56.0
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 3.0e-53 213.4 324 49.4
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 6.6e-53 212.2 415 52.0
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 8.6e-53 211.8 403 44.7
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 8.6e-53 211.8 422 46.0
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 1.1e-52 211.5 487 44.4
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 2.5e-52 210.3 379 49.9
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 5.6e-52 209.1 374 51.1
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 7.3e-52 208.8 391 47.3
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 9.5e-52 208.4 384 49.5
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 9.5e-52 208.4 343 55.4
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 1.2e-51 208.0 488 38.5
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 4.7e-51 206.1 410 40.0
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 1.1e-50 204.9 348 45.7
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 1.4e-50 204.5 425 45.4
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 1.4e-50 204.5 425 45.4
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 4.0e-50 203.0 372 50.3
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 4.0e-50 203.0 395 48.6
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 4.0e-50 203.0 418 44.5
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 6.8e-50 202.2 295 56.6
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 8.9e-50 201.8 294 55.1
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 2.6e-49 200.3 122 80.3
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 2.6e-49 200.3 286 53.5
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 1.7e-48 197.6 287 49.1
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 8.3e-48 195.3 459 37.3
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 9.2e-47 191.8 434 43.5
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 2.3e-45 187.2 407 44.2
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 3.0e-45 186.8 244 48.4
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 8.6e-45 185.3 403 42.4
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 8.6e-45 185.3 432 41.0
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 9.5e-44 181.8 399 40.6
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 3.6e-43 179.9 396 42.7
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 3.6e-43 179.9 360 46.9
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 3.6e-43 179.9 371 40.4
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 4.7e-43 179.5 393 45.5
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 6.2e-43 179.1 104 81.7
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 6.2e-43 179.1 350 46.9
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 4.0e-42 176.4 295 48.5
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 8.9e-42 175.3 390 46.2
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 1.2e-41 174.9 390 46.7
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 2.0e-41 174.1 311 43.1
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 2.0e-41 174.1 424 36.3
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 3.4e-41 173.3 390 46.4
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 1.7e-40 171.0 110 76.4
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 1.7e-40 171.0 292 39.0
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 2.9e-40 170.2 410 40.5
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 1.1e-39 168.3 397 42.6
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 3.2e-39 166.8 248 44.8
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 2.7e-38 163.7 122 67.2
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 3.5e-38 163.3 399 35.6
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 6.0e-38 162.5 108 75.0
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 1.3e-37 161.4 123 68.3
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 2.3e-37 160.6 396 44.7
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 1.5e-36 157.9 108 72.2
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 7.3e-36 155.6 363 40.5
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 1.6e-35 154.5 107 72.0
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 2.8e-35 153.7 395 42.3
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 1.1e-34 151.8 388 38.4
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 3.4e-33 146.7 450 41.1
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 2.9e-32 143.7 347 45.0
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 5.4e-31 139.4 295 36.9
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 7.8e-30 135.6 95 67.4
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 1.0e-29 135.2 117 60.7
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 1.7e-29 134.4 76 86.8
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 6.6e-29 132.5 285 36.1
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 4.3e-28 129.8 256 52.7
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 4.5e-25 119.8 319 34.8
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 4.9e-24 116.3 64 82.8
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 4.2e-23 113.2 86 64.0
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 7.1e-23 112.5 343 42.0
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 1.0e-21 108.6 73 72.6
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 5.1e-21 106.3 54 90.7
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 1.3e-19 101.7 239 42.7
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 6.9e-18 95.9 54 85.2
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 5.8e-17 92.8 54 81.5
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 1.3e-16 91.7 53 83.0
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 3.8e-16 90.1 61 70.5
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 1.8e-13 81.3 363 31.4
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 5.5e-07 59.7 100 39.0
PRCOL_00004634 Prasinoderma coloniale HOM05D006498 ORTHO05D006377 6.1e-06 56.2 84 34.5


User provided reference genes

Program Settings