Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 1.0e-129 466.8 251 100.0
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 2.7e-90 335.9 251 71.7
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 1.1e-88 330.5 251 70.1
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 6.4e-84 314.7 253 67.2
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 1.4e-83 313.5 243 67.9
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 1.4e-83 313.5 243 67.9
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 1.4e-83 313.5 251 66.5
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.6e-82 310.1 251 67.3
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 2.3e-81 306.2 253 66.0
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 5.1e-81 305.1 251 64.9
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 1.5e-80 303.5 249 66.3
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 7.4e-80 301.2 249 64.7
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 1.6e-79 300.1 243 66.7
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 2.1e-79 299.7 249 65.9
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 1.4e-78 297.0 251 64.1
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 2.6e-77 292.7 251 64.1
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 2.1e-74 283.1 245 60.8
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 2.7e-74 282.7 251 62.5
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 3.5e-74 282.3 253 61.7
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 7.9e-74 281.2 248 60.5
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.5e-72 276.9 247 61.1
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 9.6e-72 274.2 251 62.5
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 1.3e-71 273.9 251 61.0
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 4.8e-71 271.9 244 59.4
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 1.4e-70 270.4 244 59.8
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 1.4e-70 270.4 244 59.4
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.8e-70 270.0 252 59.5
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 2.4e-70 269.6 244 59.8
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 3.1e-70 269.2 244 59.8
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 1.2e-69 267.3 243 59.7
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 1.5e-69 266.9 251 58.6
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 2.0e-69 266.5 244 59.4
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 2.6e-69 266.2 246 59.3
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 5.8e-69 265.0 245 59.6
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 5.8e-69 265.0 250 58.4
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 7.6e-69 264.6 250 57.2
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 1.0e-68 264.2 249 61.4
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 1.7e-68 263.5 274 54.4
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 1.7e-68 263.5 244 59.0
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.8e-68 262.3 250 58.8
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 5.0e-68 261.9 251 58.6
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.1e-67 260.8 214 65.0
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 1.1e-67 260.8 249 56.6
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 1.4e-67 260.4 240 58.8
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 1.9e-67 260.0 244 59.0
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 1.9e-67 260.0 250 57.6
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 1.9e-67 260.0 250 56.8
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 3.2e-67 259.2 262 55.3
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 2.1e-66 256.5 249 57.0
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 1.0e-65 254.2 244 57.4
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 1.3e-65 253.8 231 58.4
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 3.0e-65 252.7 243 57.6
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 3.9e-65 252.3 250 56.4
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 7.4e-64 248.1 295 50.2
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 9.7e-64 247.7 243 55.1
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 8.2e-63 244.6 240 55.4
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 8.2e-63 244.6 249 55.4
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 4.1e-62 242.3 250 56.8
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 5.3e-62 241.9 244 55.7
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 5.9e-61 238.4 244 58.2
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 2.2e-60 236.5 202 63.4
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 2.2e-60 236.5 195 65.1
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 1.1e-59 234.2 258 51.6
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 4.2e-59 232.3 249 56.6
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 5.5e-59 231.9 228 53.9
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 1.0e-57 227.6 228 53.1
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 2.8e-55 219.5 244 51.6
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 2.8e-55 219.5 242 50.8
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 1.2e-53 214.2 242 48.3
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 3.4e-53 212.6 267 48.3
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 5.9e-53 211.8 233 51.1
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 5.9e-53 211.8 249 48.2
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 1.3e-52 210.7 262 49.6
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 2.5e-51 206.5 276 46.7
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 2.3e-49 199.9 251 49.4
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 5.1e-49 198.7 200 56.0
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.0e-48 196.8 251 47.8
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 2.0e-48 196.8 201 58.2
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.6e-45 186.4 251 45.8
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 5.0e-44 182.2 151 65.6
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 2.6e-40 169.9 147 63.3
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 5.7e-40 168.7 235 44.3
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 1.8e-38 163.7 251 42.2
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 1.6e-37 160.6 145 61.4
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 4.5e-37 159.1 126 65.1
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 1.3e-36 157.5 146 58.2
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.6e-34 150.6 124 63.7
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 9.1e-30 134.8 121 59.5
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 3.8e-28 129.4 126 54.8
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 4.1e-22 109.4 131 47.3
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 1.5e-19 100.9 169 42.6
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 7.3e-19 98.6 243 30.0
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 9.5e-19 98.2 90 60.0
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 9.5e-19 98.2 169 38.5
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 3.0e-17 93.2 102 51.0
TWI63G1298 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 8.9e-17 91.7 108 47.2
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 2.6e-16 90.1 259 27.4
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 3.9e-12 76.3 193 32.6
vmacro20809 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 6.6e-12 75.5 55 63.6
MBI16_g42994_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 7.3e-11 72.0 128 39.8
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 3.1e-09 66.6 61 52.5
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 4.0e-09 66.2 62 51.6
Actinidia07549 Actinidia chinensis HOM05D007474 ORTHO05D009367 2.6e-08 63.5 47 61.7
Eucgr.C00104 Eucalyptus grandis HOM05D007474 ORTHO05D009367 3.4e-08 63.2 57 52.6


User provided reference genes

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