Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029301001 Vitis vinifera HOM05D005152 ORTHO05D006162 1.4e-110 402.9 194 100.0
Nn7g36798 Nelumbo nucifera HOM05D005152 ORTHO05D006162 4.3e-27 125.6 84 71.4
SalBow4G0649 Salvia bowleyana HOM05D005152 ORTHO05D006162 1.8e-25 120.2 86 66.3
COL.COLO4_16941 Corchorus olitorius HOM05D005152 ORTHO05D006162 2.3e-25 119.8 98 59.2
TAR633G1644 Trochodendron aralioides HOM05D005152 ORTHO05D006162 5.2e-25 118.6 84 69.0
Nitab4.5_0000236g0070 Nicotiana tabacum HOM05D005152 ORTHO05D006162 6.8e-25 118.2 87 67.8
Sopen07g023910 Solanum pennellii HOM05D005152 ORTHO05D006162 6.8e-25 118.2 86 68.6
PGSC0003DMG400017379 Solanum tuberosum HOM05D005152 ORTHO05D006162 6.8e-25 118.2 86 68.6
Hund07432 Selenicereus undatus HOM05D005152 ORTHO05D006162 8.9e-25 117.9 84 70.2
Sc09g0005740 Simmondsia chinensis HOM05D005152 ORTHO05D006162 8.9e-25 117.9 88 62.5
Cc02_g30140 Coffea canephora HOM05D005152 ORTHO05D006162 1.2e-24 117.5 94 61.7
Thecc.03G310200 Theobroma cacao HOM05D005152 ORTHO05D006162 1.2e-24 117.5 91 63.7
Sed0006572 Sechium edule HOM05D005152 ORTHO05D006162 1.5e-24 117.1 105 57.1
ClCG02G022750 Citrullus lanatus HOM05D005152 ORTHO05D006162 4.4e-24 115.5 86 65.1
Sc09g0005710 Simmondsia chinensis HOM05D005152 ORTHO05D006162 4.4e-24 115.5 84 64.3
Solyc07g045370.3 Solanum lycopersicum HOM05D005152 ORTHO05D006162 5.8e-24 115.2 86 67.4
Rhsim13G0207600 Rhododendron simsii HOM05D005152 ORTHO05D006162 1.7e-23 113.6 84 65.5
MSTRG.20931 Avicennia marina HOM05D005152 ORTHO05D006162 2.2e-23 113.2 86 60.5
Ciclev10014592m.g Citrus clementina HOM05D005152 ORTHO05D006162 2.9e-23 112.8 92 60.9
Manes.02G136600 Manihot esculenta HOM05D005152 ORTHO05D006162 2.9e-23 112.8 101 53.5
Oeu046803.1 Olea europaea HOM05D005152 ORTHO05D006162 2.9e-23 112.8 87 66.7
Actinidia24470 Actinidia chinensis HOM05D005152 ORTHO05D006162 3.8e-23 112.5 86 65.1
AUR62006555 Chenopodium quinoa HOM05D005152 ORTHO05D006162 6.4e-23 111.7 84 60.7
CsaV3_6G038870 Cucumis sativus L. HOM05D005152 ORTHO05D006162 6.4e-23 111.7 86 61.6
MELO3C014552.2 Cucumis melo HOM05D005152 ORTHO05D006162 1.1e-22 110.9 86 62.8
RcHm_v2.0_Chr7g0223811 Rosa chinensis HOM05D005152 ORTHO05D006162 1.1e-22 110.9 90 61.1
CAN.G1514.1 Capsicum annuum HOM05D005152 ORTHO05D006162 1.4e-22 110.5 84 66.7
Gohir.D03G176100 Gossypium hirsutum HOM05D005152 ORTHO05D006162 1.4e-22 110.5 92 60.9
TWI75G0576 Tripterygium wilfordii HOM05D005152 ORTHO05D006162 1.4e-22 110.5 91 62.6
Gorai.003G185300 Gossypium raimondii HOM05D005152 ORTHO05D006162 1.9e-22 110.2 92 60.9
MD08G1241200 Malus domestica HOM05D005152 ORTHO05D006162 1.9e-22 110.2 94 60.6
vmacro12803 Vaccinium macrocarpon HOM05D005152 ORTHO05D006162 1.9e-22 110.2 86 61.6
Lsat_1_v5_gn_2_33000 Lactuca sativa HOM05D005152 ORTHO05D006162 2.4e-22 109.8 86 57.0
EL10Ac4g10101 Beta vulgaris HOM05D005152 ORTHO05D006162 3.2e-22 109.4 84 61.9
Potri.009G067800 Populus trichocarpa HOM05D005152 ORTHO05D006162 5.4e-22 108.6 100 52.0
Gohir.A03G000034 Gossypium hirsutum HOM05D005152 ORTHO05D006162 9.2e-22 107.8 92 59.8
Lj2C487T6 Lonicera japonica HOM05D005152 ORTHO05D006162 1.2e-21 107.5 85 58.8
PSO339G4523 Papaver somniferum HOM05D005152 ORTHO05D006162 1.2e-21 107.5 109 54.1
PSO384G2750 Papaver somniferum HOM05D005152 ORTHO05D006162 1.2e-21 107.5 109 54.1
Prupe.4G267500 Prunus persica HOM05D005152 ORTHO05D006162 1.2e-21 107.5 93 58.1
SGA_v2.0_scaffold79G25574 Striga asiatica HOM05D005152 ORTHO05D006162 1.2e-21 107.5 83 62.7
SGA_v2.0_scaffold96G29125 Striga asiatica HOM05D005152 ORTHO05D006162 1.2e-21 107.5 83 62.7
DCAR_002098 Daucus carota HOM05D005152 ORTHO05D006162 1.6e-21 107.1 90 58.9
Peaxi162Scf00014g00212 Petunia axillaris HOM05D005152 ORTHO05D006162 1.6e-21 107.1 85 63.5
CAN.G437.19 Capsicum annuum HOM05D005152 ORTHO05D006162 2.1e-21 106.7 82 63.4
HanXRQChr14g0432261 Helianthus annuus HOM05D005152 ORTHO05D006162 2.1e-21 106.7 83 62.7
Ah.06g194700 Amaranthus hybridus HOM05D005152 ORTHO05D006178 2.7e-21 106.3 84 63.1
AUR62000209 Chenopodium quinoa HOM05D005152 ORTHO05D006162 2.7e-21 106.3 85 62.4
Eucgr.J00691 Eucalyptus grandis HOM05D005152 ORTHO05D006162 3.5e-21 105.9 63 76.2
CDE04G1157 Ceratophyllum demersum HOM05D005152 ORTHO05D006162 4.6e-21 105.5 66 66.7
CDE07G1900 Ceratophyllum demersum HOM05D005152 ORTHO05D006162 4.6e-21 105.5 66 66.7
MD15G1434100 Malus domestica HOM05D005152 ORTHO05D006162 4.6e-21 105.5 107 50.5
arahy.Tifrunner.gnm1.ann1.3CD1QA Arachis hypogaea HOM05D005152 ORTHO05D006162 6.0e-21 105.1 89 60.7
arahy.Tifrunner.gnm1.ann1.NHHR58 Arachis hypogaea HOM05D005152 ORTHO05D006162 6.0e-21 105.1 89 60.7
Sabra09G0050800 Salix brachista HOM05D005152 ORTHO05D006162 6.0e-21 105.1 102 51.0
Psat2g020920 Pisum sativum HOM05D005152 ORTHO05D006162 7.8e-21 104.8 84 58.3
Aqoxy1G00386 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 1.0e-20 104.4 84 54.8
FAN13G1175 Fragaria x ananassa HOM05D005152 ORTHO05D006162 1.0e-20 104.4 88 56.8
LjContig00564g0003451 Lotus japonicus HOM05D005152 ORTHO05D006162 1.0e-20 104.4 85 58.8
Prupe.3G132200 Prunus persica HOM05D005152 ORTHO05D006162 1.0e-20 104.4 92 57.6
HPP92_019896 Vanilla planifolia HOM05D005152 ORTHO05D006162 1.0e-20 104.4 71 67.6
FAN08G2618 Fragaria x ananassa HOM05D005152 ORTHO05D006162 3.0e-20 102.8 88 56.8
Potri.001G273600 Populus trichocarpa HOM05D005152 ORTHO05D006162 3.0e-20 102.8 102 49.0
CANSAT11G0534 Cannabis sativa HOM05D005152 ORTHO05D006162 8.6e-20 101.3 96 52.1
Cfa009894 Carpinus fangiana HOM05D005152 ORTHO05D006162 1.5e-19 100.5 66 69.7
FvH4_5g29960 Fragaria vesca HOM05D005152 ORTHO05D006162 1.5e-19 100.5 88 55.7
FAN18G0878 Fragaria x ananassa HOM05D005152 ORTHO05D006162 1.5e-19 100.5 88 55.7
SEGI_04037 Sequoiadendron giganteum HOM05D005152 ORTHO05D006162 1.9e-19 100.1 65 64.6
Haze_23256 Corylus avellana HOM05D005152 ORTHO05D006162 2.5e-19 99.8 67 68.7
QL01p016753 Quercus lobata HOM05D005152 ORTHO05D006162 2.5e-19 99.8 66 68.2
TPR.G16391 Trifolium pratense HOM05D005152 ORTHO05D006162 2.5e-19 99.8 81 56.8
Atru.chr11.1399 Acer truncatum HOM05D005152 ORTHO05D006162 7.3e-19 98.2 68 64.7
Glyma.14G036100 Glycine max HOM05D005152 ORTHO05D006162 7.3e-19 98.2 84 57.1
FAN04G0382 Fragaria x ananassa HOM05D005152 ORTHO05D006162 9.6e-19 97.8 88 54.5
Lalb_Chr10g0106191 Lupinus albus HOM05D005152 ORTHO05D006162 9.6e-19 97.8 87 50.6
Aqoxy7G02965 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 1.2e-18 97.4 63 65.1
Phvul.008G202300 Phaseolus vulgaris HOM05D005152 ORTHO05D006162 1.6e-18 97.1 84 56.0
VMungo0647G0059 Vigna mungo HOM05D005152 ORTHO05D006162 1.6e-18 97.1 85 55.3
Glyma.02G278500 Glycine max HOM05D005152 ORTHO05D006162 2.1e-18 96.7 70 64.3
MBI19_g42986_MAGBIO Magnolia biondii HOM05D005152 ORTHO05D006162 3.6e-18 95.9 62 69.4
ECA238G0396 Erigeron canadensis HOM05D005152 ORTHO05D006162 8.1e-18 94.7 96 45.8
ATR1096G100 Amborella trichopoda HOM05D005152 ORTHO05D006162 1.1e-17 94.4 70 58.6
Ca_06203_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 1.4e-17 94.0 84 53.6
Ca_06206_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 1.4e-17 94.0 84 53.6
Medtr5g089190 Medicago truncatula HOM05D005152 ORTHO05D006162 1.4e-17 94.0 85 50.6
Sc09g0005720 Simmondsia chinensis HOM05D005152 ORTHO05D006162 1.4e-17 94.0 80 56.2
C03p06370 Brassica napus HOM05D005152 ORTHO05D006162 4.0e-17 92.4 90 54.4
BolC3t13143H Brassica oleracea HOM05D005152 ORTHO05D006162 4.0e-17 92.4 90 54.4
Migut.A00480 Erythranthe guttata HOM05D005152 ORTHO05D006162 4.0e-17 92.4 86 51.2
THA.LOC104816332 Tarenaya hassleriana HOM05D005152 ORTHO05D006162 1.2e-16 90.9 65 67.7
Aa31LG3G15010 Aethionema arabicum HOM05D005152 ORTHO05D006162 1.5e-16 90.5 79 55.7
BcaB01g05418 Brassica carinata HOM05D005152 ORTHO05D006162 1.5e-16 90.5 90 54.4
Carub.0006s1072 Capsella rubella HOM05D005152 ORTHO05D006162 1.5e-16 90.5 89 52.8
THA.LOC104799141 Tarenaya hassleriana HOM05D005152 ORTHO05D006162 1.5e-16 90.5 79 57.0
A03p05460 Brassica napus HOM05D005152 ORTHO05D006162 2.6e-16 89.7 90 53.3
Sp6g31420 Schrenkiella parvula HOM05D005152 ORTHO05D006162 2.6e-16 89.7 89 53.9
CARHR200900 Cardamine hirsuta HOM05D005152 ORTHO05D006162 3.4e-16 89.4 82 52.4
Thhalv10012989m.g Eutrema salsugineum HOM05D005152 ORTHO05D006162 3.4e-16 89.4 104 49.0
BraA03t09884Z Brassica rapa HOM05D005152 ORTHO05D006162 4.4e-16 89.0 74 58.1
AL6G23010 Arabidopsis lyrata HOM05D005152 ORTHO05D006162 5.8e-16 88.6 82 53.7
AT5G12220 Arabidopsis thaliana HOM05D005152 ORTHO05D006162 5.8e-16 88.6 89 53.9
PGR119G0699 Punica granatum HOM05D005152 ORTHO05D006162 5.8e-16 88.6 63 60.3
Os12g0189900 Oryza sativa ssp. japonica HOM05D005152 ORTHO05D006162 5.4e-14 82.0 69 56.5
Duzib205G1611 Durio zibethinus HOM05D005152 ORTHO05D006162 2.1e-13 80.1 83 47.0
Zm00001eb150380 Zea mays HOM05D005152 ORTHO05D006162 1.7e-12 77.0 67 53.7
Pp3c5_25710 Physcomitrium patens HOM05D005152 ORTHO05D006162 6.6e-12 75.1 75 48.0
Pp3c25_13080 Physcomitrium patens HOM05D005152 ORTHO05D006162 2.1e-10 70.1 58 51.7
Mapoly0027s0150 Marchantia polymorpha HOM05D005152 ORTHO05D006162 2.8e-10 69.7 69 43.5
AagrBONN_evm.TU.Sc2ySwM_228.1465 Anthoceros agrestis HOM05D005152 ORTHO05D006162 4.8e-10 68.9 68 44.1
TAR636G3031 Trochodendron aralioides HOM05D005152 ORTHO05D006162 6.2e-10 68.6 73 47.9
Sc09g0005680 Simmondsia chinensis HOM05D005152 ORTHO05D006162 1.4e-09 67.4 54 61.1
Nitab4.5_0000975g0020 Nicotiana tabacum HOM05D005152 ORTHO05D006162 4.0e-09 65.9 56 60.7
MCO05G618 Micromonas commoda HOM05D005152 ORTHO05D006162 7.6e-08 61.6 75 40.0
Hund07429 Selenicereus undatus HOM05D005152 ORTHO05D006162 1.3e-07 60.8 54 59.3
Cpa.g.sc189.1 Carica papaya HOM05D005152 ORTHO05D006162 8.4e-07 58.2 59 52.5
CBR_g41105 Chara braunii HOM05D001740 ORTHO05D001468 4.2e-06 55.8 78 34.6
Cre01.g002201 Chlamydomonas reinhardtii HOM05D005152 ORTHO05D006162 4.2e-06 55.8 57 42.1


User provided reference genes

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