Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 1.6e-84 316.2 187 100.0
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 1.0e-49 200.7 187 65.8
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 4.2e-48 195.3 189 74.6
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 7.2e-48 194.5 198 62.1
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.6e-47 193.4 193 60.1
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 2.1e-47 193.0 193 60.1
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 8.0e-47 191.0 193 61.7
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 6.8e-46 188.0 193 67.9
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 8.8e-46 187.6 192 64.6
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 4.4e-45 185.3 187 69.0
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 1.3e-44 183.7 192 54.2
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 8.3e-44 181.0 187 68.4
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 1.4e-43 180.3 185 68.6
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 2.4e-43 179.5 188 69.1
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 2.4e-43 179.5 186 62.4
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 2.4e-43 179.5 191 69.1
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 4.1e-43 178.7 186 56.5
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 7.0e-43 177.9 190 66.8
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 1.2e-42 177.2 187 65.8
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 3.5e-42 175.6 184 54.3
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 3.5e-42 175.6 184 54.9
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 4.5e-42 175.3 188 67.0
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 4.5e-42 175.3 186 55.9
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 1.7e-41 173.3 191 58.1
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 8.6e-41 171.0 187 54.5
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 8.6e-41 171.0 187 65.8
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 1.9e-40 169.9 190 67.9
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.9e-40 169.9 193 63.7
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 5.6e-40 168.3 186 57.0
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 7.2e-40 167.9 188 66.0
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 2.8e-39 166.0 189 66.7
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 3.6e-39 165.6 187 63.6
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 6.1e-39 164.9 188 58.5
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.0e-38 164.1 189 66.1
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.8e-38 163.3 186 58.1
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 3.0e-38 162.5 189 63.5
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 6.8e-38 161.4 186 65.1
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 8.9e-38 161.0 184 60.9
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 1.5e-37 160.2 196 51.0
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 2.0e-37 159.8 190 49.5
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 3.4e-37 159.1 187 65.8
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 3.4e-37 159.1 191 50.8
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 9.8e-37 157.5 185 65.9
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 1.3e-36 157.1 190 63.7
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 1.3e-36 157.1 188 61.7
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 2.2e-36 156.4 187 60.4
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 2.9e-36 156.0 161 70.8
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 1.8e-35 153.3 186 48.4
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 9.2e-35 151.0 186 54.3
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 1.2e-34 150.6 185 50.8
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 1.6e-34 150.2 194 47.9
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 2.7e-34 149.4 187 57.8
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 1.0e-33 147.5 134 72.4
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 8.6e-33 144.4 185 48.1
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 1.5e-32 143.7 149 57.0
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 2.5e-32 142.9 187 46.0
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 4.3e-32 142.1 187 58.8
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 7.3e-32 141.4 174 65.5
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 9.5e-32 141.0 186 60.2
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 1.6e-31 140.2 183 50.8
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.6e-31 140.2 175 64.0
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 2.8e-31 139.4 189 58.7
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 1.0e-30 137.5 184 49.5
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 1.4e-30 137.1 158 67.7
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 1.4e-30 137.1 130 56.9
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 1.8e-30 136.7 188 48.4
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 3.1e-30 136.0 182 46.7
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 6.8e-30 134.8 184 49.5
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 1.5e-29 133.7 125 61.6
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 2.0e-29 133.3 149 68.5
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 2.6e-29 132.9 201 54.7
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 4.4e-29 132.1 125 60.0
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 5.8e-29 131.7 194 45.9
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 7.5e-29 131.3 189 57.1
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 9.8e-29 131.0 125 61.6
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 9.8e-29 131.0 193 58.0
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 1.3e-28 130.6 192 45.3
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 2.9e-28 129.4 199 50.3
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 1.1e-27 127.5 163 52.8
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 1.9e-27 126.7 186 58.1
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 1.9e-27 126.7 132 62.1
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 1.9e-27 126.7 132 62.1
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 2.4e-27 126.3 122 58.2
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 4.1e-27 125.6 133 57.1
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 5.4e-27 125.2 195 56.4
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 7.0e-27 124.8 105 71.4
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 1.2e-26 124.0 125 60.0
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 2.0e-26 123.2 173 58.4
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 3.5e-26 122.5 150 52.0
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 7.8e-26 121.3 138 47.8
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 2.3e-25 119.8 198 47.5
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 1.1e-24 117.5 137 68.6
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 9.5e-24 114.4 93 68.8
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 1.2e-23 114.0 127 59.8
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 4.7e-23 112.1 190 41.6
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 1.4e-22 110.5 163 57.1
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 6.4e-20 101.7 181 47.0
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 4.1e-19 99.0 104 58.7
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 1.0e-17 94.4 126 61.1
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 4.7e-15 85.5 106 51.9
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 1.1e-14 84.3 160 38.8
Sp6g19070 Schrenkiella parvula HOM05D007139 ORTHO05D009171 3.7e-12 75.9 191 45.0
Haze_21949 Corylus avellana HOM05D007139 ORTHO05D009171 2.4e-11 73.2 80 76.2
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 3.2e-11 72.8 148 37.8
AagrBONN_evm.TU.Sc2ySwM_344.2913 Anthoceros agrestis HOM05D007139 ORTHO05D009171 6.8e-06 55.1 127 39.4


User provided reference genes

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