Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029208001 Vitis vinifera HOM05D005586 ORTHO05D007044 0.0e+00 1115.9 579 100.0
TAR383G0761 Trochodendron aralioides HOM05D005586 ORTHO05D007044 1.8e-254 882.5 636 74.8
TAR626G0800 Trochodendron aralioides HOM05D005586 ORTHO05D007044 4.4e-253 877.9 634 74.1
Dinv41251 Davidia involucrata HOM05D005586 ORTHO05D007044 8.3e-252 873.6 625 76.5
Lj9P685T24 Lonicera japonica HOM05D005586 ORTHO05D007044 9.2e-251 870.2 633 74.2
TWI60G0698 Tripterygium wilfordii HOM05D005586 ORTHO05D007044 1.2e-250 869.8 654 72.6
CSS0030464 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 2.9e-249 865.1 631 73.7
DCAR_017968 Daucus carota HOM05D005586 ORTHO05D007044 1.9e-248 862.4 629 73.3
Dinv25464 Davidia involucrata HOM05D005586 ORTHO05D007044 3.6e-247 858.2 630 74.0
Rhsim07G0149700 Rhododendron simsii HOM05D005586 ORTHO05D007044 6.1e-247 857.4 627 72.9
Aqoxy7G02326 Aquilegia oxysepala HOM05D005586 ORTHO05D007044 1.4e-246 856.3 635 72.4
PSO170G6484 Papaver somniferum HOM05D005586 ORTHO05D007044 4.0e-246 854.7 636 71.5
Atru.chr7.639 Acer truncatum HOM05D005586 ORTHO05D007044 1.2e-245 853.2 649 70.7
PSO063G4043 Papaver somniferum HOM05D005586 ORTHO05D007044 1.7e-244 849.4 636 71.2
Lj7P472T26 Lonicera japonica HOM05D005586 ORTHO05D007044 2.2e-244 849.0 634 72.1
Potri.006G168200 Populus trichocarpa HOM05D005586 ORTHO05D007044 1.9e-243 845.9 658 69.8
Lj4g0013239 Lotus japonicus HOM05D005586 ORTHO05D007044 5.4e-243 844.3 634 70.8
Sabra06G0129800 Salix brachista HOM05D005586 ORTHO05D007044 6.0e-242 840.9 658 69.8
RcHm_v2.0_Chr4g0402481 Rosa chinensis HOM05D005586 ORTHO05D007044 7.8e-242 840.5 644 71.9
ClCG06G013320 Citrullus lanatus HOM05D005586 ORTHO05D007044 5.0e-241 837.8 649 70.1
CSS0000496 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 8.6e-241 837.0 631 71.9
CiPaw.07G192200 Carya illinoinensis HOM05D005586 ORTHO05D007044 1.5e-240 836.3 648 71.1
MELO3C017465.2 Cucumis melo HOM05D005586 ORTHO05D007044 2.1e-239 832.4 649 69.3
Prupe.2G007900 Prunus persica HOM05D005586 ORTHO05D007044 3.6e-239 831.6 656 70.0
FAN18G4074 Fragaria x ananassa HOM05D005586 ORTHO05D007044 4.7e-239 831.2 648 71.5
FvH4_5g27790 Fragaria vesca HOM05D005586 ORTHO05D007044 1.1e-238 830.1 648 71.3
Nn4g25000 Nelumbo nucifera HOM05D005586 ORTHO05D007044 1.4e-238 829.7 615 73.3
FAN08G2362 Fragaria x ananassa HOM05D005586 ORTHO05D007044 3.1e-238 828.6 646 71.4
ECA234G4574 Erigeron canadensis HOM05D005586 ORTHO05D007044 4.0e-238 828.2 631 71.8
CANSAT11G2700 Cannabis sativa HOM05D005586 ORTHO05D007044 5.2e-238 827.8 647 68.8
CsaV3_1G031580 Cucumis sativus L. HOM05D005586 ORTHO05D007044 8.9e-238 827.0 649 69.0
Ciclev10007551m.g Citrus clementina HOM05D005586 ORTHO05D007044 1.2e-237 826.6 650 69.2
Ca_21173_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 2.0e-237 825.9 639 69.8
Ca_21222_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 2.0e-237 825.9 639 69.8
Sed0005590 Sechium edule HOM05D005586 ORTHO05D007044 5.8e-237 824.3 648 69.4
Eucgr.C02307 Eucalyptus grandis HOM05D005586 ORTHO05D007044 9.8e-237 823.5 651 69.1
Glyma.20G083600 Glycine max HOM05D005586 ORTHO05D007044 1.7e-236 822.8 635 70.4
Duzib168G0896 Durio zibethinus HOM05D005586 ORTHO05D007044 2.2e-236 822.4 646 70.6
Hma1.2p1_1025F.1_g249260 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 2.2e-236 822.4 592 74.8
COL.COLO4_33680 Corchorus olitorius HOM05D005586 ORTHO05D007044 2.9e-236 822.0 645 69.8
Glyma.17G063500 Glycine max HOM05D005586 ORTHO05D007044 6.4e-236 820.8 635 70.2
arahy.Tifrunner.gnm1.ann1.F5X18S Arachis hypogaea HOM05D005586 ORTHO05D007044 1.9e-235 819.3 643 70.1
Haze_22099 Corylus avellana HOM05D005586 ORTHO05D007044 9.2e-235 817.0 647 68.9
Cfa013507 Carpinus fangiana HOM05D005586 ORTHO05D007044 1.6e-234 816.2 649 68.9
Phvul.003G146100 Phaseolus vulgaris HOM05D005586 ORTHO05D007044 4.6e-234 814.7 634 69.9
Medtr4g128210 Medicago truncatula HOM05D005586 ORTHO05D007044 7.8e-234 813.9 640 70.2
Sed0016049 Sechium edule HOM05D005586 ORTHO05D007044 1.0e-233 813.5 650 68.5
Psat0s509g0200 Pisum sativum HOM05D005586 ORTHO05D007044 6.6e-233 810.8 639 69.0
Lalb_Chr12g0199381 Lupinus albus HOM05D005586 ORTHO05D007044 8.6e-233 810.4 643 69.1
Manes.14G153700 Manihot esculenta HOM05D005586 ORTHO05D007044 1.1e-232 810.1 629 70.0
PGR102G3328 Punica granatum HOM05D005586 ORTHO05D007044 1.9e-232 809.3 634 69.9
QL02p097708 Quercus lobata HOM05D005586 ORTHO05D007044 7.3e-232 807.4 648 69.6
Cpa.g.sc95.50 Carica papaya HOM05D005586 ORTHO05D007044 2.8e-231 805.4 629 70.4
Gohir.A08G084500 Gossypium hirsutum HOM05D005586 ORTHO05D007044 3.6e-231 805.1 648 68.7
Cc06_g13260 Coffea canephora HOM05D005586 ORTHO05D007044 4.7e-231 804.7 643 69.1
Lsat_1_v5_gn_5_84680 Lactuca sativa HOM05D005586 ORTHO05D007044 4.7e-231 804.7 637 69.1
VMungo1215G0758 Vigna mungo HOM05D005586 ORTHO05D007044 4.7e-231 804.7 620 71.0
Oeu009835.1 Olea europaea HOM05D005586 ORTHO05D007044 8.1e-231 803.9 618 70.2
Peaxi162Scf00231g00064 Petunia axillaris HOM05D005586 ORTHO05D007044 1.8e-230 802.7 641 68.0
Gorai.004G099900 Gossypium raimondii HOM05D005586 ORTHO05D007044 2.3e-230 802.4 648 68.7
Ah.14g083790 Amaranthus hybridus HOM05D005586 ORTHO05D007044 6.8e-230 800.8 645 67.9
Sc08g0005320 Simmondsia chinensis HOM05D005586 ORTHO05D007044 1.2e-229 800.0 635 69.6
MSTRG.6212 Avicennia marina HOM05D005586 ORTHO05D007044 1.4e-227 793.1 641 67.2
Nitab4.5_0000730g0080 Nicotiana tabacum HOM05D005586 ORTHO05D007044 1.4e-227 793.1 641 67.7
MD13G1254800 Malus domestica HOM05D005586 ORTHO05D007044 1.9e-227 792.7 631 68.8
Aa31LG3G13340 Aethionema arabicum HOM05D005586 ORTHO05D007044 9.2e-227 790.4 643 66.7
THA.LOC104811789 Tarenaya hassleriana HOM05D005586 ORTHO05D007044 2.7e-226 788.9 646 66.1
CAN.G1161.32 Capsicum annuum HOM05D005586 ORTHO05D007044 1.5e-224 783.1 647 66.5
EL10Ac8g18286 Beta vulgaris HOM05D005586 ORTHO05D007044 2.5e-224 782.3 650 66.3
Solyc10g078790.1 Solanum lycopersicum HOM05D005586 ORTHO05D007044 7.3e-224 780.8 639 66.7
PGSC0003DMG400011415 Solanum tuberosum HOM05D005586 ORTHO05D007044 7.3e-224 780.8 639 66.5
BcaB08g36100 Brassica carinata HOM05D005586 ORTHO05D007044 1.6e-223 779.6 645 66.2
Sopen10g029410 Solanum pennellii HOM05D005586 ORTHO05D007044 1.6e-223 779.6 639 66.5
Thecc.09G173100 Theobroma cacao HOM05D005586 ORTHO05D007044 2.4e-222 775.8 629 69.5
Oeu025223.1 Olea europaea HOM05D005586 ORTHO05D007044 4.0e-222 775.0 643 66.3
AL8G33420 Arabidopsis lyrata HOM05D005586 ORTHO05D007044 2.6e-221 772.3 647 64.8
Nitab4.5_0004134g0010 Nicotiana tabacum HOM05D005586 ORTHO05D007044 7.6e-221 770.8 630 67.5
Carub.0008s1797 Capsella rubella HOM05D005586 ORTHO05D007044 1.3e-220 770.0 649 64.7
BraA10t43568Z Brassica rapa HOM05D005586 ORTHO05D007044 2.9e-220 768.8 644 65.7
Sp6g19170 Schrenkiella parvula HOM05D005586 ORTHO05D007044 2.9e-220 768.8 647 64.5
C09p49310 Brassica napus HOM05D005586 ORTHO05D007044 3.8e-220 768.5 649 65.0
Migut.J01477 Erythranthe guttata HOM05D005586 ORTHO05D007044 4.9e-220 768.1 642 64.0
Nitab4.5_0000455g0040 Nicotiana tabacum HOM05D005586 ORTHO05D007044 6.4e-220 767.7 630 67.3
AT5G57460 Arabidopsis thaliana HOM05D005586 ORTHO05D007044 8.4e-220 767.3 651 64.1
C03p14980 Brassica napus HOM05D005586 ORTHO05D007044 1.1e-219 766.9 648 64.2
BcaB01g04458 Brassica carinata HOM05D005586 ORTHO05D007044 1.4e-219 766.5 648 63.9
BcaC04g19966 Brassica carinata HOM05D005586 ORTHO05D007044 1.4e-219 766.5 651 64.7
MBI03_g13495_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 1.4e-219 766.5 641 65.4
A10p14890 Brassica napus HOM05D005586 ORTHO05D007044 1.9e-219 766.1 647 64.8
A03p12820 Brassica napus HOM05D005586 ORTHO05D007044 3.2e-219 765.4 646 64.2
CARHR271250 Cardamine hirsuta HOM05D005586 ORTHO05D007044 4.2e-219 765.0 654 63.6
BolC3t13940H Brassica oleracea HOM05D005586 ORTHO05D007044 5.4e-219 764.6 647 64.1
BraA03t10590Z Brassica rapa HOM05D005586 ORTHO05D007044 5.4e-219 764.6 645 64.2
SGA_v2.0_scaffold17G07909 Striga asiatica HOM05D005586 ORTHO05D007044 1.6e-218 763.1 632 65.7
BcaC01g06487 Brassica carinata HOM05D005586 ORTHO05D007044 2.1e-218 762.7 645 64.3
Thhalv10015707m.g Eutrema salsugineum HOM05D005586 ORTHO05D007044 3.5e-218 761.9 645 63.6
Aa31LG3G220 Aethionema arabicum HOM05D005586 ORTHO05D007044 3.0e-217 758.8 641 64.6
BolC9t57782H Brassica oleracea HOM05D005586 ORTHO05D007044 1.1e-216 756.9 639 65.1
PSO541G5977 Papaver somniferum HOM05D005586 ORTHO05D007044 8.1e-215 750.7 651 64.4
TPR.G5407 Trifolium pratense HOM05D005586 ORTHO05D007044 7.6e-213 744.2 578 69.2
MBI14_g17367_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 5.1e-209 731.5 634 62.5
CDE04G2484 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 3.3e-208 728.8 632 62.7
AUR62021301 Chenopodium quinoa HOM05D005586 ORTHO05D007044 3.3e-208 728.8 646 64.2
SHI41749 Sapria himalayana HOM05D005586 ORTHO05D007044 9.6e-208 727.2 650 62.5
AUR62033219 Chenopodium quinoa HOM05D005586 ORTHO05D007044 2.8e-207 725.7 646 63.9
Gohir.D08G094100 Gossypium hirsutum HOM05D005586 ORTHO05D007044 1.5e-205 719.9 648 63.4
Hma1.2p1_3184F.1_g333760 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 7.6e-197 691.0 609 65.0
ATR0618G120 Amborella trichopoda HOM05D005586 ORTHO05D007044 3.8e-196 688.7 635 59.8
Actinidia15717 Actinidia chinensis HOM05D005586 ORTHO05D007044 4.6e-194 681.8 614 62.7
SalBow6G0691 Salvia bowleyana HOM05D005586 ORTHO05D007044 1.1e-192 677.2 629 60.6
MD13G1254300 Malus domestica HOM05D005586 ORTHO05D007044 1.3e-188 663.7 644 60.1
SEGI_38070 Sequoiadendron giganteum HOM05D005586 ORTHO05D007044 2.1e-186 656.4 637 56.7
SalBow1G5715 Salvia bowleyana HOM05D005586 ORTHO05D007044 6.1e-186 654.8 635 58.0
Actinidia14649 Actinidia chinensis HOM05D005586 ORTHO05D007044 6.3e-183 644.8 530 68.1
Os08g0243900 Oryza sativa ssp. japonica HOM05D005586 ORTHO05D007044 1.0e-180 637.5 643 57.1
Zm00001eb414690 Zea mays HOM05D005586 ORTHO05D007044 1.4e-179 633.6 638 56.0
MBI18_g04576_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 8.2e-175 617.8 630 57.3
CDE02G2425 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 3.3e-160 569.3 640 52.5
MBI16_g35931_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 9.4e-155 551.2 514 62.3
BcaC01g06491 Brassica carinata HOM05D005586 ORTHO05D007044 1.9e-147 526.9 589 53.0
Mapoly0111s0055 Marchantia polymorpha HOM05D005586 ORTHO05D007044 7.0e-134 481.9 657 44.7
BcaC01g06494 Brassica carinata HOM05D005586 ORTHO05D007044 1.6e-130 470.7 580 50.2
Pp3c25_4850 Physcomitrium patens HOM05D005586 ORTHO05D007044 5.8e-128 462.2 658 42.1
COL.COLO4_04392 Corchorus olitorius HOM05D005586 ORTHO05D007044 6.2e-122 442.2 368 65.8
AagrBONN_evm.TU.Sc2ySwM_368.670 Anthoceros agrestis HOM05D005586 ORTHO05D007044 7.6e-112 408.7 665 39.1
unitig_899.g14851 Utricularia gibba HOM05D005586 ORTHO05D007044 3.2e-94 350.1 243 71.2
unitig_899.g14852 Utricularia gibba HOM05D005586 ORTHO05D007044 7.1e-86 322.4 319 60.2
SMO228G0090 Selaginella moellendorffii HOM05D005586 ORTHO05D007044 1.5e-75 288.1 404 43.1
HPP92_000781 Vanilla planifolia HOM05D005586 ORTHO05D007044 3.9e-68 263.5 288 55.2
MD16G1258000 Malus domestica HOM05D005586 ORTHO05D007044 2.2e-39 167.9 118 70.3
CBR_g26159 Chara braunii HOM05D005586 ORTHO05D000002 7.2e-38 162.9 544 28.3
QL11p053068 Quercus lobata HOM05D005586 ORTHO05D007044 1.4e-25 122.1 118 62.7
MD16G1258100 Malus domestica HOM05D005586 ORTHO05D007044 2.3e-20 104.8 88 62.5
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 1.7e-15 88.6 94 54.3
CBR_g26157 Chara braunii HOM05D005586 ORTHO05D007044 2.8e-13 81.3 77 51.9
MBI16_g35934_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 1.2e-11 75.9 51 62.7
MBI16_g35933_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009834 9.8e-11 72.8 45 80.0
SalBow4G0612 Salvia bowleyana HOM05D005586 ORTHO05D360416 1.4e-09 68.9 46 65.2
CDE04G1231 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 2.7e-08 64.7 176 31.2


User provided reference genes

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