Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029180001 Vitis vinifera HOM05D004981 ORTHO05D005635 4.3e-210 734.6 412 100.0
Dinv24195 Davidia involucrata HOM05D004981 ORTHO05D005635 7.7e-127 458.0 417 68.8
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 2.1e-116 423.3 400 66.2
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 1.4e-115 420.6 366 64.2
Duzib132G0770 Durio zibethinus HOM05D004981 ORTHO05D005635 2.3e-115 419.9 417 61.2
Manes.06G012400 Manihot esculenta HOM05D004981 ORTHO05D005635 3.7e-113 412.5 408 64.5
CSS0034779 Camellia sinensis var. sinensis HOM05D004981 ORTHO05D005635 4.9e-113 412.1 413 61.7
MD05G1045100 Malus domestica HOM05D004981 ORTHO05D005635 1.1e-112 411.0 423 61.9
CiPaw.06G153000 Carya illinoinensis HOM05D004981 ORTHO05D005635 1.8e-112 410.2 406 64.5
Gohir.D13G054600 Gossypium hirsutum HOM05D004981 ORTHO05D005635 7.0e-112 408.3 413 62.2
Nn5g30124 Nelumbo nucifera HOM05D004981 ORTHO05D005635 1.2e-111 407.5 412 62.1
Thecc.02G139100 Theobroma cacao HOM05D004981 ORTHO05D005635 1.2e-111 407.5 417 61.4
Gorai.013G061400 Gossypium raimondii HOM05D004981 ORTHO05D005635 7.8e-111 404.8 413 62.0
Prupe.8G061500 Prunus persica HOM05D004981 ORTHO05D005635 1.0e-110 404.4 372 61.0
Atru.chr5.2124 Acer truncatum HOM05D004981 ORTHO05D005635 1.5e-109 400.6 422 60.7
Potri.001G205700 Populus trichocarpa HOM05D004981 ORTHO05D005635 1.2e-108 397.5 416 59.9
Gohir.A13G067000 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.6e-108 397.1 413 61.3
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 1.6e-108 397.1 378 60.6
Gohir.A03G173700 Gossypium hirsutum HOM05D004981 ORTHO05D005635 6.2e-108 395.2 416 57.7
Sed0011642 Sechium edule HOM05D004981 ORTHO05D005635 6.2e-108 395.2 397 62.2
MELO3C018646.2 Cucumis melo HOM05D004981 ORTHO05D005635 1.4e-107 394.0 402 60.2
TWI59G1067 Tripterygium wilfordii HOM05D004981 ORTHO05D005635 5.2e-107 392.1 417 60.9
CsaV3_7G006460 Cucumis sativus L. HOM05D004981 ORTHO05D005635 1.5e-106 390.6 402 60.2
Gorai.005G219800 Gossypium raimondii HOM05D004981 ORTHO05D005635 2.6e-106 389.8 416 58.4
Gohir.D02G196800 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.7e-105 387.1 416 57.9
Lj6g0025255 Lotus japonicus HOM05D004981 ORTHO05D005635 3.2e-104 382.9 419 58.2
TAR114G0002 Trochodendron aralioides HOM05D004981 ORTHO05D005635 2.7e-103 379.8 329 65.0
Duzib248G0633 Durio zibethinus HOM05D004981 ORTHO05D005635 4.6e-103 379.0 370 57.0
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea HOM05D004981 ORTHO05D005635 1.0e-102 377.9 416 58.9
Cc02_g21590 Coffea canephora HOM05D004981 ORTHO05D005635 5.0e-102 375.6 407 58.7
Rhsim05G0107500 Rhododendron simsii HOM05D004981 ORTHO05D005635 7.3e-101 371.7 450 52.9
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea HOM05D004981 ORTHO05D005635 1.2e-100 370.9 416 57.9
Rhsim05G0107600 Rhododendron simsii HOM05D004981 ORTHO05D005635 1.2e-100 370.9 452 52.4
Ca_00133_v3 Cicer arietinum L. HOM05D004981 ORTHO05D005635 3.6e-100 369.4 413 57.9
CANSAT11G0061 Cannabis sativa HOM05D004981 ORTHO05D005635 1.1e-99 367.9 413 60.0
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla HOM05D004981 ORTHO05D005635 4.0e-99 365.9 354 66.9
ClCG09G015370 Citrullus lanatus HOM05D004981 ORTHO05D005635 5.2e-99 365.5 399 59.4
PGR142G3166 Punica granatum HOM05D004981 ORTHO05D005635 1.2e-98 364.4 410 60.7
Lj5A239G83 Lonicera japonica HOM05D004981 ORTHO05D005635 3.4e-98 362.8 334 61.7
Potri.003G023700 Populus trichocarpa HOM05D004981 ORTHO05D005635 3.4e-98 362.8 422 58.3
COL.COLO4_24958 Corchorus olitorius HOM05D004981 ORTHO05D005635 1.9e-96 357.1 429 54.5
MBI02_g08724_MAGBIO Magnolia biondii HOM05D004981 ORTHO05D005635 9.2e-96 354.8 408 59.6
Cpa.g.sc49.24 Carica papaya HOM05D004981 ORTHO05D005635 5.1e-94 349.0 362 55.8
PGSC0003DMG400011507 Solanum tuberosum HOM05D004981 ORTHO05D005635 4.3e-93 345.9 412 57.3
Sopen04g004240 Solanum pennellii HOM05D004981 ORTHO05D005635 5.6e-93 345.5 413 57.1
Solyc04g009060.4 Solanum lycopersicum HOM05D004981 ORTHO05D005635 9.5e-93 344.7 413 57.4
Sabra01G0158000 Salix brachista HOM05D004981 ORTHO05D005635 1.2e-92 344.4 383 54.0
Sc20g0002060 Simmondsia chinensis HOM05D004981 ORTHO05D005635 2.1e-92 343.6 367 55.3
VMungo0540G0644 Vigna mungo HOM05D004981 ORTHO05D005635 8.1e-92 341.7 417 54.7
Lalb_Chr20g0123041 Lupinus albus HOM05D004981 ORTHO05D005635 4.0e-91 339.3 420 56.7
CDE10G0645 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 5.2e-91 339.0 415 56.1
CAN.G274.6 Capsicum annuum HOM05D004981 ORTHO05D005635 3.4e-90 336.3 413 56.2
Oeu047361.1 Olea europaea HOM05D004981 ORTHO05D005635 3.4e-90 336.3 366 53.0
Phvul.006G206700 Phaseolus vulgaris HOM05D004981 ORTHO05D005635 7.6e-90 335.1 417 55.4
vmacro19928 Vaccinium macrocarpon HOM05D004981 ORTHO05D005635 2.9e-89 333.2 516 48.8
Ciclev10025761m.g Citrus clementina HOM05D004981 ORTHO05D005635 6.4e-89 332.0 451 50.8
HanXRQChr16g0514321 Helianthus annuus HOM05D004981 ORTHO05D005635 1.2e-87 327.8 423 54.1
Nitab4.5_0008051g0010 Nicotiana tabacum HOM05D004981 ORTHO05D005635 1.9e-85 320.5 326 57.4
Glyma.08G179200 Glycine max HOM05D004981 ORTHO05D005635 2.8e-84 316.6 463 49.5
Peaxi162Scf00152g01024 Petunia axillaris HOM05D004981 ORTHO05D005635 4.7e-84 315.8 311 60.1
Glyma.15G053300 Glycine max HOM05D004981 ORTHO05D005635 1.4e-83 314.3 465 48.6
Medtr2g008810 Medicago truncatula HOM05D004981 ORTHO05D005635 1.8e-83 313.9 416 51.4
ECA234G4021 Erigeron canadensis HOM05D004981 ORTHO05D005635 1.3e-81 307.8 418 51.7
Lsat_1_v5_gn_5_107300 Lactuca sativa HOM05D004981 ORTHO05D005635 7.1e-80 302.0 416 52.4
ATR0753G166 Amborella trichopoda HOM05D004981 ORTHO05D005635 8.7e-78 295.0 414 48.6
Oeu011769.5 Olea europaea HOM05D004981 ORTHO05D005635 3.3e-77 293.1 403 46.9
TPR.G9514 Trifolium pratense HOM05D004981 ORTHO05D005635 3.3e-77 293.1 373 53.6
Eucgr.I02666 Eucalyptus grandis HOM05D004981 ORTHO05D005635 2.8e-76 290.0 243 67.9
Dinv09034 Davidia involucrata HOM05D004981 ORTHO05D005635 3.6e-76 289.7 240 66.7
Migut.B00612 Erythranthe guttata HOM05D004981 ORTHO05D005635 4.8e-76 289.3 410 50.2
Psat1g216680 Pisum sativum HOM05D004981 ORTHO05D005635 1.4e-75 287.7 368 49.7
THA.LOC104818438 Tarenaya hassleriana HOM05D004981 ORTHO05D005635 4.0e-75 286.2 423 48.2
SGA_v2.0_scaffold83G26298 Striga asiatica HOM05D004981 ORTHO05D005635 1.5e-74 284.3 431 44.3
SalBow5G0436 Salvia bowleyana HOM05D004981 ORTHO05D005635 1.4e-72 277.7 403 49.1
AUR62010122 Chenopodium quinoa HOM05D004981 ORTHO05D005635 3.2e-72 276.6 420 48.3
Aa31LG3G17630 Aethionema arabicum HOM05D004981 ORTHO05D005635 9.3e-72 275.0 416 49.0
PSO781G0052 Papaver somniferum HOM05D004981 ORTHO05D005635 1.6e-71 274.2 411 49.4
FAN04G0403 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.5e-71 273.1 415 51.6
PSO541G0435 Papaver somniferum HOM05D004981 ORTHO05D005635 4.6e-71 272.7 411 48.7
FAN18G1425 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.3e-70 271.2 423 49.6
DCAR_021855 Daucus carota HOM05D004981 ORTHO05D005635 3.0e-70 270.0 399 44.6
MSTRG.20297 Avicennia marina HOM05D004981 ORTHO05D005635 3.3e-69 266.5 257 56.4
Prupe.5G160300 Prunus persica HOM05D004981 ORTHO05D005635 9.6e-69 265.0 419 50.1
Nitab4.5_0000480g0020 Nicotiana tabacum HOM05D004981 ORTHO05D005635 1.2e-66 258.1 325 50.8
SEGI_39436 Sequoiadendron giganteum HOM05D004981 ORTHO05D005635 1.5e-66 257.7 375 44.8
Aqoxy6G00803 Aquilegia oxysepala HOM05D004981 ORTHO05D005635 4.5e-66 256.1 409 47.2
EL10Ac9g21471 Beta vulgaris HOM05D004981 ORTHO05D005635 9.9e-66 255.0 371 49.3
RcHm_v2.0_Chr7g0191681 Rosa chinensis HOM05D004981 ORTHO05D005635 8.4e-65 251.9 418 47.8
FvH4_5g07000 Fragaria vesca HOM05D004981 ORTHO05D005635 1.4e-64 251.1 424 48.3
Zm00001eb311320 Zea mays HOM05D004981 ORTHO05D005635 3.9e-62 243.0 414 45.2
MD14G1166200 Malus domestica HOM05D004981 ORTHO05D005635 5.1e-62 242.7 432 47.2
Sabra03G0014800 Salix brachista HOM05D004981 ORTHO05D005635 5.1e-62 242.7 233 61.8
FAN08G0200 Fragaria x ananassa HOM05D004981 ORTHO05D005635 4.3e-61 239.6 414 46.1
AUR62013118 Chenopodium quinoa HOM05D004981 ORTHO05D005635 9.6e-61 238.4 451 40.6
TPR.G21754 Trifolium pratense HOM05D004981 ORTHO05D005635 4.0e-59 233.0 228 57.5
Sp6g33940 Schrenkiella parvula HOM05D004981 ORTHO05D005635 2.6e-58 230.3 258 52.7
C09p67980 Brassica napus HOM05D004981 ORTHO05D005635 7.6e-58 228.8 261 51.7
BolC9t59557H Brassica oleracea HOM05D004981 ORTHO05D005635 7.6e-58 228.8 261 51.7
A10p27880 Brassica napus HOM05D004981 ORTHO05D005635 1.3e-57 228.0 261 51.0
BraA10t44837Z Brassica rapa HOM05D004981 ORTHO05D005635 2.2e-57 227.3 261 51.0
Os09g0372400 Oryza sativa ssp. japonica HOM05D004981 ORTHO05D005635 3.8e-57 226.5 332 48.2
Hund00058 Selenicereus undatus HOM05D004981 ORTHO05D005635 5.5e-56 222.6 374 41.7
BcaB08g37209 Brassica carinata HOM05D004981 ORTHO05D005635 3.5e-55 219.9 255 51.8
AL6G19780 Arabidopsis lyrata HOM05D004981 ORTHO05D005635 1.8e-54 217.6 417 44.8
Pp3c22_4170 Physcomitrium patens HOM05D004981 ORTHO05D005635 1.5e-53 214.5 393 42.5
COL.COLO4_15286 Corchorus olitorius HOM05D004981 ORTHO05D005635 2.8e-52 210.3 250 54.8
HPP92_013108 Vanilla planifolia HOM05D004981 ORTHO05D005635 3.7e-52 209.9 224 53.6
AT5G09390 Arabidopsis thaliana HOM05D004981 ORTHO05D005635 8.2e-52 208.8 417 43.6
Mapoly0041s0053 Marchantia polymorpha HOM05D004981 ORTHO05D005635 2.4e-51 207.2 411 42.3
CARHR204020 Cardamine hirsuta HOM05D004981 ORTHO05D005635 5.9e-50 202.6 408 40.7
Thhalv10013574m.g Eutrema salsugineum HOM05D004981 ORTHO05D005635 5.9e-50 202.6 419 42.7
Carub.0006s0794 Capsella rubella HOM05D004981 ORTHO05D005635 5.0e-49 199.5 417 42.4
Medtr5g017190 Medicago truncatula HOM05D004981 ORTHO05D005635 3.2e-48 196.8 225 51.6
Lj1g0016172 Lotus japonicus HOM05D004981 ORTHO05D005635 3.0e-46 190.3 434 35.3
CBR_g31506 Chara braunii HOM05D004981 ORTHO05D005635 1.3e-44 184.9 328 39.3
FAN08G2142 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.2e-42 178.3 395 44.3
HPP92_013085 Vanilla planifolia HOM05D004981 ORTHO05D005635 1.7e-41 174.5 319 40.8
SMO356G0631 Selaginella moellendorffii HOM05D004981 ORTHO05D005635 2.2e-41 174.1 227 44.5
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis HOM05D004981 ORTHO05D005635 9.4e-40 168.7 247 44.5
Ah.01g009580 Amaranthus hybridus HOM05D004981 ORTHO05D005635 2.2e-33 147.5 252 40.5
FAN21G1455 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.1e-27 128.6 384 37.0
RcHm_v2.0_Chr7g0224681 Rosa chinensis HOM05D004981 ORTHO05D005635 4.7e-23 113.2 221 42.1
VMungo1383G1991 Vigna mungo HOM05D004981 ORTHO05D005635 5.2e-22 109.8 140 49.3
Ah.01g009610 Amaranthus hybridus HOM05D004981 ORTHO05D005635 8.2e-20 102.4 185 40.0
FvH4_4g13240 Fragaria vesca HOM05D004981 ORTHO05D005635 3.8e-17 93.6 242 35.1
Lsat_1_v5_gn_5_82561 Lactuca sativa HOM05D004981 ORTHO05D005635 1.1e-16 92.0 131 52.7
FAN12G0625 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.5e-16 90.9 91 59.3
Thecc.06G050700 Theobroma cacao HOM05D004981 ORTHO05D005635 7.2e-16 89.4 85 56.5
C05p07220 Brassica napus HOM05D001624 ORTHO05D005635 1.3e-12 78.6 105 45.7
FAN17G2803 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.8e-11 74.7 156 36.5
CDE10G1193 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 9.1e-11 72.4 76 56.6
Cre06.g299450 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 9.1e-11 72.4 105 41.9
PRCOL_00000241 Prasinoderma coloniale HOM05D004981 ORTHO05D005635 1.6e-10 71.6 192 27.1
VMungo1383G0650 Vigna mungo HOM05D004981 ORTHO05D005635 5.0e-09 66.6 177 32.2
CDE10G0753 Ceratophyllum demersum HOM05D000867 ORTHO05D000864 9.5e-08 62.4 74 48.6
Dinv07233 Davidia involucrata HOM05D004981 ORTHO05D005635 1.6e-07 61.6 68 48.5
BcaC05g24776 Brassica carinata HOM05D004981 ORTHO05D005635 3.6e-07 60.5 48 54.2
Lsat_1_v5_gn_5_14961 Lactuca sativa HOM05D004981 ORTHO05D005635 1.0e-06 58.9 178 32.6
BolC7t41892H Brassica oleracea HOM05D004981 ORTHO05D042093 1.4e-06 58.5 86 40.7
Lsat_1_v5_gn_4_93920 Lactuca sativa HOM05D004981 ORTHO05D005635 8.8e-06 55.8 103 40.8


User provided reference genes

Program Settings