Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.3e-221 771.9 385 100.0
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.3e-157 560.1 377 75.1
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 2.0e-153 546.2 397 69.0
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.1e-151 540.4 377 70.8
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 7.9e-150 534.3 398 69.1
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.8e-149 533.1 376 71.5
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 5.1e-149 531.6 400 67.2
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.5e-148 530.0 395 67.3
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 2.8e-147 525.8 370 70.5
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 2.8e-147 525.8 391 67.0
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 8.2e-147 524.2 400 67.0
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 2.0e-145 519.6 382 67.5
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.0e-144 515.0 386 68.9
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 8.5e-144 514.2 380 70.8
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.5e-143 512.7 376 67.6
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 4.2e-143 511.9 375 68.0
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 9.4e-143 510.8 363 69.7
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.2e-142 510.4 383 68.1
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 2.7e-142 509.2 383 67.9
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 6.1e-142 508.1 388 66.8
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.0e-141 507.3 356 71.1
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 2.3e-141 506.1 390 65.4
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.6e-140 502.7 377 67.9
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 4.4e-140 501.9 384 66.4
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 9.7e-140 500.7 376 66.2
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 3.7e-139 498.8 379 68.3
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 8.2e-139 497.7 388 63.7
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 8.2e-139 497.7 392 64.3
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 5.3e-138 495.0 383 66.6
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.0e-138 494.6 376 65.4
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 7.0e-138 494.6 391 63.9
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.2e-137 493.8 384 64.6
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 4.5e-137 491.9 364 67.9
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 7.7e-137 491.1 373 66.5
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 8.5e-136 487.6 377 63.9
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 5.5e-135 485.0 394 62.7
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 7.2e-135 484.6 373 65.1
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 1.6e-134 483.4 389 63.5
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 2.1e-134 483.0 386 64.8
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 6.1e-134 481.5 387 61.5
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 2.3e-133 479.6 355 65.6
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 8.8e-133 477.6 400 61.8
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.2e-132 477.2 391 62.4
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 4.4e-132 475.3 390 61.8
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 8.2e-131 471.1 299 77.3
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 9.1e-130 467.6 377 64.5
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 2.7e-129 466.1 384 63.0
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 5.9e-129 464.9 433 57.7
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 1.0e-128 464.2 392 63.5
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 3.8e-128 462.2 389 61.2
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 7.2e-127 458.0 384 62.5
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 9.4e-127 457.6 381 61.4
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.6e-124 449.5 374 64.4
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 3.4e-124 449.1 356 61.8
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 2.2e-123 446.4 295 73.6
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.2e-123 446.4 337 68.0
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 4.8e-123 445.3 379 60.9
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 8.3e-123 444.5 356 61.5
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 3.1e-122 442.6 366 62.8
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 3.5e-121 439.1 395 57.5
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 9.5e-119 431.0 381 58.3
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 1.2e-118 430.6 374 62.6
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.2e-118 430.6 374 62.8
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.8e-118 429.5 361 63.4
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 4.7e-118 428.7 372 61.3
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 5.2e-117 425.2 369 59.1
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 6.8e-117 424.9 369 59.6
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 8.8e-117 424.5 372 61.3
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 1.2e-116 424.1 354 60.2
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.2e-116 424.1 343 62.4
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.6e-116 422.9 366 59.8
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 5.7e-116 421.8 372 58.1
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 5.7e-116 421.8 369 59.1
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 7.5e-116 421.4 370 59.7
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.3e-115 420.6 376 60.6
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.8e-115 419.5 370 59.5
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.7e-115 419.1 376 58.5
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 8.3e-115 417.9 370 58.4
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 2.0e-113 413.3 387 57.1
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 3.5e-113 412.5 351 61.0
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.5e-113 412.5 358 57.0
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 1.0e-112 411.0 382 55.0
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.3e-112 410.6 351 60.7
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 1.7e-112 410.2 292 68.8
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 2.9e-112 409.5 351 60.4
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.8e-112 409.1 358 56.7
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 5.0e-112 408.7 336 61.9
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 9.5e-111 404.4 364 58.5
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.9e-107 392.1 272 72.1
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 3.2e-106 389.4 316 62.3
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 3.5e-105 386.0 265 69.8
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 3.4e-100 369.4 291 63.2
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 2.7e-97 359.8 411 48.2
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 4.6e-97 359.0 226 75.7
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 6.0e-97 358.6 288 61.1
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.8e-94 349.7 322 58.7
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 3.1e-93 346.3 238 72.7
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 6.8e-93 345.1 318 55.7
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.6e-89 334.0 248 66.9
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.3e-88 330.1 342 53.2
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.6e-86 323.9 374 48.7
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.8e-85 320.5 323 50.2
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.1e-82 311.2 179 79.9
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 3.5e-81 306.2 306 51.3
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 7.3e-79 298.5 297 55.6
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 5.8e-76 288.9 171 77.8
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 4.6e-57 226.1 330 40.0
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.9e-55 220.7 192 62.5
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 6.0e-49 199.1 170 60.0
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 3.2e-42 176.8 334 35.0
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.0e-40 171.8 205 45.4
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.4e-40 171.4 302 39.1
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 9.7e-39 165.2 140 62.1
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 6.3e-38 162.5 186 48.9
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 6.1e-25 119.4 115 54.8
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.8e-24 117.9 69 82.6
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 9.1e-13 79.0 55 67.3
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 6.5e-11 72.8 86 44.2
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.4e-07 60.1 88 47.7


User provided reference genes

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