Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 2.9e-118 428.7 239 100.0
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 2.7e-79 299.3 210 73.8
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 5.9e-79 298.1 208 74.0
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 3.3e-77 292.4 207 72.0
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 7.3e-77 291.2 199 73.9
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 1.6e-76 290.0 223 71.3
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 6.1e-76 288.1 192 75.5
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 2.6e-74 282.7 240 63.8
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 5.8e-74 281.6 217 68.7
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 9.8e-74 280.8 215 69.3
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 9.8e-74 280.8 242 69.8
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.3e-73 280.4 210 72.4
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 1.7e-73 280.0 215 68.4
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 4.9e-73 278.5 214 66.4
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 4.9e-73 278.5 215 71.6
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 4.9e-73 278.5 218 67.0
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 1.1e-72 277.3 209 68.4
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 5.4e-72 275.0 222 71.6
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 5.4e-72 275.0 200 71.0
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.0e-71 273.1 200 70.5
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 6.0e-71 271.6 243 61.7
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 7.8e-71 271.2 217 66.4
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.3e-70 270.4 215 67.9
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 3.9e-70 268.9 182 73.1
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 4.3e-69 265.4 232 61.6
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 3.6e-68 262.3 224 64.3
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 4.7e-68 261.9 209 68.4
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 1.4e-67 260.4 209 65.6
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.4e-67 260.4 209 67.9
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 6.8e-67 258.1 199 67.8
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 8.9e-67 257.7 198 68.7
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 2.6e-66 256.1 210 65.2
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 4.4e-66 255.4 217 62.7
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.2e-65 253.1 232 68.5
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 1.9e-64 250.0 215 60.0
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 2.4e-64 249.6 214 62.1
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 9.2e-64 247.7 200 63.0
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 2.0e-63 246.5 215 60.0
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 2.7e-63 246.1 207 63.8
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 7.8e-63 244.6 223 59.6
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.3e-62 243.8 199 60.8
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.3e-62 243.8 216 59.3
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 2.3e-62 243.0 212 62.3
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 2.3e-62 243.0 238 66.8
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 3.0e-62 242.7 213 61.0
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 6.6e-62 241.5 202 64.9
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 6.6e-62 241.5 217 60.8
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 6.6e-62 241.5 200 61.5
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 8.6e-62 241.1 200 61.5
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 1.5e-61 240.4 208 61.5
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 1.5e-61 240.4 214 59.8
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.9e-61 240.0 228 59.6
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.9e-61 240.0 283 49.8
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.5e-61 239.6 192 66.7
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 2.5e-61 239.6 215 58.6
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 2.5e-61 239.6 216 61.6
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 4.3e-61 238.8 214 59.3
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 7.3e-61 238.0 214 62.6
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 9.5e-61 237.7 215 63.7
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 2.1e-60 236.5 221 60.6
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 2.8e-60 236.1 241 61.4
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.6e-60 235.7 195 59.5
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 3.6e-60 235.7 215 63.3
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 3.6e-60 235.7 199 64.8
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 2.3e-59 233.0 237 55.3
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 5.2e-59 231.9 201 61.2
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 5.2e-59 231.9 207 62.3
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 2.6e-58 229.6 232 62.1
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 4.4e-58 228.8 232 57.8
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 9.9e-58 227.6 223 64.1
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.7e-57 226.9 215 62.3
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 3.7e-57 225.7 238 63.0
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 4.9e-57 225.3 166 68.7
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 6.4e-57 224.9 239 62.8
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 6.4e-57 224.9 201 58.7
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 8.3e-57 224.6 196 59.2
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.4e-56 223.8 241 62.2
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.9e-56 223.4 210 61.0
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 2.4e-56 223.0 237 62.9
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 9.2e-56 221.1 223 57.4
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.2e-55 220.7 212 57.5
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 2.1e-55 219.9 232 62.5
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 3.5e-55 219.2 213 57.7
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 6.0e-55 218.4 207 57.5
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 1.0e-54 217.6 230 55.2
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.7e-54 216.9 212 56.1
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 3.9e-54 215.7 214 57.0
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 5.1e-54 215.3 197 59.4
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 6.6e-54 214.9 213 56.3
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 6.6e-54 214.9 252 50.8
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 8.6e-54 214.5 241 61.0
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 1.1e-53 214.2 192 58.3
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 4.3e-53 212.2 237 51.9
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 6.2e-52 208.4 207 55.1
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 1.4e-51 207.2 220 54.1
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 2.4e-51 206.5 160 70.0
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 4.0e-51 205.7 187 64.7
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 5.2e-51 205.3 217 53.9
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 1.2e-50 204.1 180 62.2
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 3.8e-49 199.1 202 56.4
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 5.4e-48 195.3 203 53.2
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 2.7e-47 193.0 201 53.2
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.3e-45 186.0 219 47.5
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 3.4e-42 176.0 184 55.4
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 6.0e-39 165.2 202 46.0
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 8.7e-38 161.4 205 44.4
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 3.3e-37 159.5 205 42.0
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 2.6e-34 149.8 198 43.9
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 7.6e-34 148.3 216 40.3
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 7.6e-34 148.3 229 38.0
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.2e-26 124.4 135 54.1
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 1.0e-22 111.3 93 60.2
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.9e-16 90.5 77 61.0
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 1.9e-16 90.5 60 78.3
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.0e-14 83.2 226 31.4
Cre19.g750397 Chlamydomonas reinhardtii HOM05D002428 ORTHO05D008664 2.1e-07 60.5 142 35.2


User provided reference genes

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