Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029065001 Vitis vinifera HOM05D005405 ORTHO05D006333 3.6e-280 967.6 488 100.0
Dinv38269 Davidia involucrata HOM05D005405 ORTHO05D006333 1.9e-76 290.8 394 48.7
Cfa014900 Carpinus fangiana HOM05D005405 ORTHO05D006333 2.4e-74 283.9 411 44.5
Haze_11572 Corylus avellana HOM05D005405 ORTHO05D006333 1.3e-72 278.1 416 43.5
Atru.chr4.1776 Acer truncatum HOM05D005405 ORTHO05D006333 3.3e-68 263.5 393 43.3
QL06p023456 Quercus lobata HOM05D005405 ORTHO05D006333 4.3e-68 263.1 428 40.9
CSS0036421 Camellia sinensis var. sinensis HOM05D005405 ORTHO05D006333 3.8e-64 250.0 391 45.5
Prupe.1G003200 Prunus persica HOM05D005405 ORTHO05D006333 4.9e-64 249.6 399 42.6
CSS0015206 Camellia sinensis var. sinensis HOM05D005405 ORTHO05D006333 7.1e-63 245.7 391 45.0
MD04G1003700 Malus domestica HOM05D005405 ORTHO05D006333 1.1e-60 238.4 406 40.4
CSS0043604 Camellia sinensis var. sinensis HOM05D005405 ORTHO05D006333 6.9e-58 229.2 395 44.1
TAR362G0670 Trochodendron aralioides HOM05D005405 ORTHO05D006333 7.9e-54 215.7 499 35.1
Potri.003G176500 Populus trichocarpa HOM05D005405 ORTHO05D006333 5.7e-52 209.5 390 38.2
TAR365G1216 Trochodendron aralioides HOM05D005405 ORTHO05D006333 5.7e-52 209.5 478 36.6
Sabra03G0129300 Salix brachista HOM05D005405 ORTHO05D006333 7.4e-52 209.1 391 38.9
Thecc.04G210400 Theobroma cacao HOM05D005405 ORTHO05D006333 2.0e-49 201.1 393 40.2
Ciclev10004706m.g Citrus clementina HOM05D005405 ORTHO05D006333 3.4e-49 200.3 391 38.9
Manes.15G050712 Manihot esculenta HOM05D005405 ORTHO05D006333 3.4e-49 200.3 377 39.0
Actinidia11394 Actinidia chinensis HOM05D005405 ORTHO05D006333 1.1e-47 195.3 390 41.3
Duzib151G0041 Durio zibethinus HOM05D005405 ORTHO05D006333 1.1e-47 195.3 397 38.8
Sabra01G0036300 Salix brachista HOM05D005405 ORTHO05D006333 1.9e-47 194.5 394 38.6
Nn3g19905 Nelumbo nucifera HOM05D005405 ORTHO05D006333 2.1e-46 191.0 508 32.9
Duzib268G1063 Durio zibethinus HOM05D005405 ORTHO05D006333 4.6e-46 189.9 394 37.8
Duzib268G1747 Durio zibethinus HOM05D005405 ORTHO05D006333 6.1e-46 189.5 394 38.1
COL.COLO4_20311 Corchorus olitorius HOM05D005405 ORTHO05D006333 1.8e-45 188.0 396 39.6
RcHm_v2.0_Chr4g0385131 Rosa chinensis HOM05D005405 ORTHO05D006333 6.3e-43 179.5 391 36.6
Gohir.A02G024600 Gossypium hirsutum HOM05D005405 ORTHO05D006333 1.5e-41 174.9 392 36.5
Gorai.005G035400 Gossypium raimondii HOM05D005405 ORTHO05D006333 5.0e-40 169.9 397 36.5
FAN17G2022 Fragaria x ananassa HOM05D005405 ORTHO05D006333 9.4e-39 165.6 395 35.2
FAN17G2416 Fragaria x ananassa HOM05D005405 ORTHO05D006333 4.7e-38 163.3 425 33.4
Gorai.006G220000 Gossypium raimondii HOM05D005405 ORTHO05D006333 5.2e-37 159.8 396 33.6
FvH4_4g00300 Fragaria vesca HOM05D005405 ORTHO05D006333 5.7e-36 156.4 403 33.5
Gohir.D09G196500 Gossypium hirsutum HOM05D005405 ORTHO05D006333 2.8e-35 154.1 389 33.9
vmacro15506 Vaccinium macrocarpon HOM05D005405 ORTHO05D006333 3.7e-35 153.7 378 36.0
Gohir.D02G031900 Gossypium hirsutum HOM05D005405 ORTHO05D006333 2.4e-34 151.0 397 35.3
Sed0022326 Sechium edule HOM05D005405 ORTHO05D006333 4.1e-34 150.2 412 32.3
MELO3C006332.2 Cucumis melo HOM05D005405 ORTHO05D006333 5.3e-34 149.8 413 33.9
Nn1g03142 Nelumbo nucifera HOM05D005405 ORTHO05D006333 5.3e-34 149.8 472 30.5
Glyma.20G076700 Glycine max HOM05D005405 ORTHO05D006333 1.0e-32 145.6 380 32.6
Medtr1g047180 Medicago truncatula HOM05D005405 ORTHO05D006333 2.9e-32 144.1 393 32.3
CsaV3_3G011210 Cucumis sativus L. HOM05D005405 ORTHO05D006333 6.5e-32 142.9 411 32.6
Rhsim02G0053500 Rhododendron simsii HOM05D005405 ORTHO05D006333 6.5e-32 142.9 383 36.0
ClCG05G003540 Citrullus lanatus HOM05D005405 ORTHO05D006333 1.1e-31 142.1 421 32.8
Sed0004689 Sechium edule HOM05D005405 ORTHO05D006333 1.9e-31 141.4 433 32.8
FAN12G1620 Fragaria x ananassa HOM05D005405 ORTHO05D006333 4.2e-31 140.2 411 32.1
Cpa.g.sc59.100 Carica papaya HOM05D005405 ORTHO05D006333 2.7e-30 137.5 344 36.6
Gohir.D10G144600 Gossypium hirsutum HOM05D005405 ORTHO05D006333 3.6e-30 137.1 395 33.2
PGR142G3403 Punica granatum HOM05D005405 ORTHO05D006333 4.7e-30 136.7 378 29.6
Lj6A613T36 Lonicera japonica HOM05D005405 ORTHO05D006333 8.0e-30 136.0 396 32.1
Gohir.A10G121500 Gossypium hirsutum HOM05D005405 ORTHO05D006333 1.8e-29 134.8 395 32.9
Gorai.011G161600 Gossypium raimondii HOM05D005405 ORTHO05D006333 3.0e-29 134.0 395 32.9
Aqoxy7G02749 Aquilegia oxysepala HOM05D005405 ORTHO05D006333 2.0e-28 131.3 421 30.4
vmacro23320 Vaccinium macrocarpon HOM05D005405 ORTHO05D006333 4.4e-28 130.2 381 36.2
Psat6g048040 Pisum sativum HOM05D005405 ORTHO05D006333 1.3e-27 128.6 384 32.3
Lalb_Chr03g0036631 Lupinus albus HOM05D005405 ORTHO05D006333 2.2e-27 127.9 384 32.3
CiPaw.02G068100 Carya illinoinensis HOM05D005405 ORTHO05D006333 4.8e-27 126.7 154 48.1
Eucgr.H00089 Eucalyptus grandis HOM05D005405 ORTHO05D006333 8.2e-27 125.9 391 32.0
Lj6g0005257 Lotus japonicus HOM05D001191 ORTHO05D006333 2.4e-26 124.4 401 31.4
Oeu022333.1 Olea europaea HOM05D005405 ORTHO05D006333 4.1e-26 123.6 403 29.3
Glyma.10G124600 Glycine max HOM05D005405 ORTHO05D006333 9.1e-26 122.5 381 32.5
Cc03_g07300 Coffea canephora HOM05D005405 ORTHO05D006333 2.7e-25 120.9 389 33.7
Phvul.007G236500 Phaseolus vulgaris HOM05D005405 ORTHO05D006333 2.7e-25 120.9 382 31.4
VMungo0720G2049 Vigna mungo HOM05D005405 ORTHO05D006333 4.5e-25 120.2 381 30.4
TPR.G11288 Trifolium pratense HOM05D005405 ORTHO05D006333 1.0e-24 119.0 302 33.1
Nitab4.5_0002920g0020 Nicotiana tabacum HOM05D005405 ORTHO05D006333 8.5e-24 115.9 392 32.1
Nitab4.5_0003904g0030 Nicotiana tabacum HOM05D005405 ORTHO05D006333 2.5e-23 114.4 393 32.3
Gohir.A09G202500 Gossypium hirsutum HOM05D005405 ORTHO05D006333 3.2e-23 114.0 269 33.5
MSTRG.21949 Avicennia marina HOM05D005405 ORTHO05D006333 9.4e-23 112.5 404 29.7
Migut.N00342 Erythranthe guttata HOM05D005405 ORTHO05D006333 8.0e-22 109.4 390 30.8
Sopen09g034410 Solanum pennellii HOM05D005405 ORTHO05D006333 2.3e-21 107.8 393 30.8
PGSC0003DMG400029647 Solanum tuberosum HOM05D005405 ORTHO05D006333 5.2e-21 106.7 389 31.4
THA.LOC104816022 Tarenaya hassleriana HOM05D005405 ORTHO05D006333 1.2e-20 105.5 360 29.2
Lalb_Chr19g0128851 Lupinus albus HOM05D005405 ORTHO05D006333 2.6e-20 104.4 375 28.5
CANSAT78G2177 Cannabis sativa HOM05D005405 ORTHO05D006333 5.7e-20 103.2 450 28.4
Solyc09g091480.4 Solanum lycopersicum HOM05D005405 ORTHO05D006333 9.8e-20 102.4 392 30.6
Peaxi162Scf00047g01223 Petunia axillaris HOM05D005405 ORTHO05D006333 4.8e-19 100.1 387 29.5
MBI10_g03399_MAGBIO Magnolia biondii HOM05D005405 ORTHO05D006333 1.4e-18 98.6 538 27.1
Ca_11844_v3 Cicer arietinum L. HOM05D005405 ORTHO05D006333 1.2e-17 95.5 142 41.5
ECA238G1203 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.2e-17 95.5 390 29.7
RhsimUnG0181000 Rhododendron simsii HOM05D005405 ORTHO05D006333 4.5e-17 93.6 361 31.9
RhsimUnG0135700 Rhododendron simsii HOM05D005405 ORTHO05D006333 5.9e-17 93.2 279 35.5
Rhsim02G0140000 Rhododendron simsii HOM05D005405 ORTHO05D006333 1.7e-16 91.7 324 32.7
THA.LOC104801040 Tarenaya hassleriana HOM05D005405 ORTHO05D006333 1.9e-15 88.2 216 33.3
Sc13g0000010 Simmondsia chinensis HOM05D005405 ORTHO05D006333 1.2e-12 79.0 346 28.6
Sc22g0000010 Simmondsia chinensis HOM05D005405 ORTHO05D006333 2.0e-12 78.2 334 28.4
Hund18545 Selenicereus undatus HOM05D005405 ORTHO05D006333 2.2e-11 74.7 373 28.4
HanXRQChr14g0435041 Helianthus annuus HOM05D005405 ORTHO05D006333 4.9e-11 73.6 387 26.4
Thhalv10007101m.g Eutrema salsugineum HOM05D005405 ORTHO05D006333 1.1e-10 72.4 326 27.3
CARHR004180 Cardamine hirsuta HOM05D005405 ORTHO05D006333 4.1e-10 70.5 377 26.5
DCAR_030784 Daucus carota HOM05D005405 ORTHO05D006333 4.1e-10 70.5 324 28.7
AL1G14510 Arabidopsis lyrata HOM05D005405 ORTHO05D006333 2.7e-09 67.8 380 26.6
Sp1g03630 Schrenkiella parvula HOM05D005405 ORTHO05D006333 2.7e-09 67.8 381 26.2
Lj3C583T4 Lonicera japonica HOM05D005405 ORTHO05D006333 1.7e-08 65.1 241 29.9
EL10Ac7g18092 Beta vulgaris HOM05D005405 ORTHO05D006333 1.1e-07 62.4 295 26.4
AT1G04790 Arabidopsis thaliana HOM05D005405 ORTHO05D006333 2.5e-07 61.2 380 26.8
Lsat_1_v5_gn_2_43220 Lactuca sativa HOM05D005405 ORTHO05D006333 2.8e-06 57.8 391 24.6


User provided reference genes

Program Settings