Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029036001 Vitis vinifera HOM05D000299 ORTHO05D000079 3.8e-89 331.6 188 100.0
TAR365G0144 Trochodendron aralioides HOM05D000299 ORTHO05D000079 4.4e-21 105.5 169 45.0
Manes.15G049400 Manihot esculenta HOM05D000299 ORTHO05D000079 1.7e-20 103.6 170 39.4
Nn1g03093 Nelumbo nucifera HOM05D000299 ORTHO05D000079 2.4e-19 99.8 173 48.0
Atru.chr4.1810 Acer truncatum HOM05D000299 ORTHO05D000079 9.3e-19 97.8 174 43.1
TAR636G2376 Trochodendron aralioides HOM05D000299 ORTHO05D000079 6.0e-18 95.1 169 39.6
Thecc.04G215200 Theobroma cacao HOM05D000299 ORTHO05D000079 3.9e-17 92.4 152 40.1
Duzib212G0584 Durio zibethinus HOM05D000299 ORTHO05D000079 1.5e-16 90.5 151 41.1
Duzib151G0537 Durio zibethinus HOM05D000299 ORTHO05D000079 4.3e-16 89.0 156 41.0
TWI73G0918 Tripterygium wilfordii HOM05D000299 ORTHO05D000079 4.3e-16 89.0 157 42.7
Actinidia25087 Actinidia chinensis HOM05D000299 ORTHO05D000079 5.6e-16 88.6 156 44.2
CiPaw.01G205200 Carya illinoinensis HOM05D000299 ORTHO05D000079 7.3e-16 88.2 158 40.5
Cc03_g07150 Coffea canephora HOM05D000299 ORTHO05D000079 1.6e-15 87.0 164 46.3
TWI53G1656 Tripterygium wilfordii HOM05D000299 ORTHO05D000079 2.1e-15 86.7 154 45.5
Potri.001G053500 Populus trichocarpa HOM05D000299 ORTHO05D000079 8.1e-15 84.7 169 42.6
Sed0020462 Sechium edule HOM05D000299 ORTHO05D000079 1.8e-14 83.6 156 41.0
Sabra01G0037700 Salix brachista HOM05D000299 ORTHO05D000079 2.4e-14 83.2 162 43.8
FAN07G2177 Fragaria x ananassa HOM05D000299 ORTHO05D000079 5.3e-14 82.0 148 39.9
Potri.003G174800 Populus trichocarpa HOM05D000299 ORTHO05D000079 5.3e-14 82.0 161 44.1
Sabra03G0128200 Salix brachista HOM05D000299 ORTHO05D000079 5.3e-14 82.0 161 38.5
RcHm_v2.0_Chr4g0396671 Rosa chinensis HOM05D000299 ORTHO05D000079 1.2e-13 80.9 148 39.9
Migut.N00329 Erythranthe guttata HOM05D000299 ORTHO05D000079 2.0e-13 80.1 156 44.2
FvH4_4g05560 Fragaria vesca HOM05D000299 ORTHO05D000079 2.6e-13 79.7 148 39.9
FAN22G2276 Fragaria x ananassa HOM05D000299 ORTHO05D000079 2.6e-13 79.7 148 39.9
CSS0006935 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 3.4e-13 79.3 148 45.9
CSS0049672 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 3.4e-13 79.3 148 45.9
ClCG06G007510 Citrullus lanatus HOM05D000299 ORTHO05D000079 5.8e-13 78.6 179 34.6
FAN17G2171 Fragaria x ananassa HOM05D000299 ORTHO05D000079 5.8e-13 78.6 148 39.9
Haze_11545 Corylus avellana HOM05D000299 ORTHO05D000079 7.6e-13 78.2 95 57.9
FAN12G3392 Fragaria x ananassa HOM05D000299 ORTHO05D000079 9.9e-13 77.8 148 39.2
Actinidia35941 Actinidia chinensis HOM05D000299 ORTHO05D000079 1.7e-12 77.0 163 47.9
CsaV3_2G012140 Cucumis sativus L. HOM05D000299 ORTHO05D000079 1.7e-12 77.0 167 34.7
Hund19256 Selenicereus undatus HOM05D000299 ORTHO05D000079 2.9e-12 76.3 168 40.5
Manes.03G154500 Manihot esculenta HOM05D000299 ORTHO05D000079 4.9e-12 75.5 99 54.5
Aqoxy2G03831 Aquilegia oxysepala HOM05D000299 ORTHO05D000079 6.4e-12 75.1 162 34.6
Dinv38288 Davidia involucrata HOM05D000299 ORTHO05D000079 1.9e-11 73.6 101 52.5
Actinidia39948 Actinidia chinensis HOM05D000299 ORTHO05D000079 2.4e-11 73.2 102 44.1
MSTRG.24640 Avicennia marina HOM05D000299 ORTHO05D000079 4.2e-11 72.4 99 56.6
SalBow3G4448 Salvia bowleyana HOM05D000299 ORTHO05D000079 4.2e-11 72.4 98 56.1
MELO3C023076.2 Cucumis melo HOM05D000299 ORTHO05D000079 7.1e-11 71.6 181 33.1
Nn3g19870 Nelumbo nucifera HOM05D000299 ORTHO05D000079 7.1e-11 71.6 83 50.6
Ciclev10005658m.g Citrus clementina HOM05D000299 ORTHO05D000079 1.2e-10 70.9 162 42.0
PSO764G0134 Papaver somniferum HOM05D000299 ORTHO05D000079 1.6e-10 70.5 175 39.4
arahy.Tifrunner.gnm1.ann1.N4A1C9 Arachis hypogaea HOM05D000299 ORTHO05D000079 2.1e-10 70.1 154 35.7
arahy.Tifrunner.gnm1.ann1.NCU4DF Arachis hypogaea HOM05D000299 ORTHO05D000079 3.5e-10 69.3 155 34.8
Hma1.2p1_0903F.1_g235050 Hydrangea macrophylla HOM05D000299 ORTHO05D000079 3.5e-10 69.3 160 37.5
Duzib268G1002 Durio zibethinus HOM05D000299 ORTHO05D000079 4.6e-10 68.9 136 39.7
Lj6g0010883 Lotus japonicus HOM05D000299 ORTHO05D000079 4.6e-10 68.9 149 37.6
Glyma.10G126900 Glycine max HOM05D000299 ORTHO05D000079 6.0e-10 68.6 148 38.5
Phvul.007G227300 Phaseolus vulgaris HOM05D000299 ORTHO05D000079 6.0e-10 68.6 152 40.8
MSTRG.21939 Avicennia marina HOM05D000299 ORTHO05D000079 1.3e-09 67.4 110 41.8
Gohir.D09G053062 Gossypium hirsutum HOM05D000299 ORTHO05D000079 1.3e-09 67.4 150 38.0
Gorai.006G054800 Gossypium raimondii HOM05D000299 ORTHO05D000079 1.3e-09 67.4 150 38.0
PSO170G3412 Papaver somniferum HOM05D000299 ORTHO05D000079 1.3e-09 67.4 170 44.1
MBI07_g21069_MAGBIO Magnolia biondii HOM05D000299 ORTHO05D000079 1.8e-09 67.0 151 39.7
Gohir.A09G053700 Gossypium hirsutum HOM05D000299 ORTHO05D000079 5.1e-09 65.5 133 36.8
CSS0045839 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 8.7e-09 64.7 156 51.9
Ca_11823_v3 Cicer arietinum L. HOM05D000299 ORTHO05D000079 8.7e-09 64.7 146 41.8
vmacro23457 Vaccinium macrocarpon HOM05D000299 ORTHO05D000079 8.7e-09 64.7 164 40.2
MSTRG.4203 Avicennia marina HOM05D000299 ORTHO05D000079 3.3e-08 62.8 98 53.1
Lalb_Chr03g0036751 Lupinus albus HOM05D000299 ORTHO05D000079 3.3e-08 62.8 147 38.1
Psat6g047280 Pisum sativum HOM05D000299 ORTHO05D000079 3.3e-08 62.8 155 40.0
Migut.G00615 Erythranthe guttata HOM05D000299 ORTHO05D000079 9.6e-08 61.2 93 44.1
QL06p022927 Quercus lobata HOM05D000299 ORTHO05D000079 9.6e-08 61.2 160 41.2
AL3G39330 Arabidopsis lyrata HOM05D000299 ORTHO05D000079 1.3e-07 60.8 104 51.0
Thhalv10002609m.g Eutrema salsugineum HOM05D000299 ORTHO05D000079 1.3e-07 60.8 162 40.7
vmacro22825 Vaccinium macrocarpon HOM05D000299 ORTHO05D000079 1.3e-07 60.8 102 49.0
MD16G1234900 Malus domestica HOM05D000299 ORTHO05D000079 1.6e-07 60.5 151 37.1
Sc19g0005920 Simmondsia chinensis HOM05D000299 ORTHO05D000079 4.8e-07 58.9 103 48.5
AT3G24050 Arabidopsis thaliana HOM05D000299 ORTHO05D000079 6.2e-07 58.5 109 46.8
Medtr1g046680 Medicago truncatula HOM05D000299 ORTHO05D000079 6.2e-07 58.5 148 38.5
DCAR_030778 Daucus carota HOM05D000299 ORTHO05D000079 8.1e-07 58.2 130 36.9
Carub.0003s2447 Capsella rubella HOM05D000299 ORTHO05D000079 1.8e-06 57.0 108 50.9
Lalb_Chr19g0128731 Lupinus albus HOM05D000299 ORTHO05D000079 2.4e-06 56.6 150 36.0
TPR.G11282 Trifolium pratense HOM05D000299 ORTHO05D000079 2.4e-06 56.6 143 40.6


User provided reference genes

Program Settings