Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 5.7e-116 421.0 225 100.0
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 6.2e-94 347.8 223 79.4
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.4e-93 346.7 225 79.6
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.4e-93 346.7 224 80.4
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.0e-93 345.1 225 79.6
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 8.9e-93 344.0 224 81.7
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.2e-92 343.6 225 78.7
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.0e-92 342.8 225 79.6
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 3.4e-92 342.0 223 79.4
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 3.4e-92 342.0 223 78.9
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 5.8e-92 341.3 223 79.4
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 5.8e-92 341.3 223 79.8
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 2.2e-91 339.3 225 79.1
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 1.4e-90 336.7 223 77.6
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 1.4e-90 336.7 223 77.1
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 3.2e-90 335.5 224 77.2
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 3.2e-90 335.5 225 78.2
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 3.2e-90 335.5 225 77.3
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 4.1e-90 335.1 223 78.0
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 4.1e-90 335.1 222 77.5
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 9.2e-90 334.0 225 76.9
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.2e-89 333.6 225 77.3
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 2.7e-89 332.4 225 76.9
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.6e-89 331.6 225 76.9
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 7.8e-89 330.9 225 76.9
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.3e-88 330.1 223 76.7
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 1.7e-88 329.7 223 76.7
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 2.3e-88 329.3 222 76.1
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.3e-88 329.3 225 74.7
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.3e-88 329.3 225 73.3
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.5e-87 326.6 225 76.0
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.9e-87 326.2 222 75.7
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 2.5e-87 325.9 223 76.7
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 4.3e-87 325.1 225 73.8
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 1.2e-86 323.6 225 72.9
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 1.6e-86 323.2 223 75.8
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 3.6e-86 322.0 225 72.9
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 8.1e-86 320.9 225 74.7
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 2.3e-85 319.3 223 75.3
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 2.3e-85 319.3 225 72.9
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 2.3e-85 319.3 282 63.5
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 4.0e-85 318.5 225 72.4
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 6.8e-85 317.8 225 72.4
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 6.8e-85 317.8 225 72.9
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 8.9e-85 317.4 226 72.6
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 4.4e-84 315.1 224 71.9
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 4.4e-84 315.1 225 72.0
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 7.5e-84 314.3 223 72.6
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 9.8e-84 313.9 225 70.2
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 9.8e-84 313.9 226 72.1
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.2e-83 312.8 223 72.2
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 4.9e-83 311.6 222 70.7
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 6.4e-83 311.2 225 72.4
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.4e-82 310.1 225 70.7
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 1.9e-82 309.7 225 70.2
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 2.4e-82 309.3 225 69.8
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 5.4e-82 308.1 223 70.9
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.6e-81 306.6 222 70.3
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 3.5e-81 305.4 226 69.5
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 3.5e-81 305.4 226 73.0
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 4.6e-81 305.1 230 71.3
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 4.6e-81 305.1 226 69.9
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 4.6e-81 305.1 221 69.7
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 6.0e-81 304.7 225 70.7
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 1.0e-80 303.9 225 68.4
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 1.3e-80 303.5 230 71.3
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.7e-80 303.1 230 70.0
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 3.9e-80 302.0 226 69.0
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 3.9e-80 302.0 226 69.0
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 3.9e-80 302.0 226 69.0
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 8.6e-80 300.8 225 69.8
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.1e-79 300.4 225 68.0
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 1.9e-79 299.7 229 69.0
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 3.3e-79 298.9 224 71.0
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 2.1e-78 296.2 225 68.4
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 4.7e-78 295.0 226 70.4
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 1.1e-77 293.9 230 69.6
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.1e-77 293.9 225 69.8
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 3.4e-76 288.9 224 66.5
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 5.8e-76 288.1 226 70.4
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.7e-75 286.6 224 69.2
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 3.2e-74 282.3 226 67.7
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 9.2e-74 280.8 226 67.3
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 9.2e-74 280.8 224 65.2
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.2e-73 280.4 222 65.3
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.7e-72 276.6 224 63.4
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.9e-72 275.4 223 65.0
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 1.1e-71 273.9 224 63.4
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.9e-71 273.1 223 63.7
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 4.7e-70 268.5 224 62.9
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 2.6e-68 262.7 245 58.4
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 2.9e-67 259.2 223 60.1
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 1.2e-65 253.8 223 58.3
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 3.9e-64 248.8 223 60.1
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.1e-63 247.3 223 59.2
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 3.3e-63 245.7 223 57.4
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.6e-62 243.4 214 59.8
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 5.3e-61 238.4 189 66.1
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.5e-60 236.9 227 58.6
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 1.5e-60 236.9 347 42.1
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.2e-58 228.8 225 55.6
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.5e-52 210.3 224 55.4
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 7.6e-52 208.0 133 78.9
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 2.2e-51 206.5 239 55.6
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 8.4e-51 204.5 185 60.0
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 5.5e-50 201.8 227 52.4
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 1.8e-45 186.8 167 63.5
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.9e-42 176.8 204 52.0
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 2.5e-42 176.4 217 48.4
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 2.5e-42 176.4 121 76.9
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 1.6e-38 163.7 138 63.8
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.5e-31 140.6 136 59.6
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 1.8e-29 133.7 120 62.5
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.3e-29 132.1 94 66.0
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 8.5e-27 124.8 133 57.9
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 2.5e-26 123.2 106 58.5
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 3.6e-25 119.4 93 59.1
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 3.7e-22 109.4 80 70.0
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.4e-21 106.7 80 71.2
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 1.2e-20 104.4 129 51.2
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 1.1e-13 81.3 210 31.0
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 8.5e-11 71.6 108 41.7
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 1.6e-09 67.4 48 66.7


User provided reference genes

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