Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 5.8e-82 307.4 142 100.0
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 4.3e-61 238.0 125 87.2
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 1.6e-60 236.1 140 78.6
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.1e-59 233.4 124 87.1
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 4.1e-59 231.5 124 85.5
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 5.3e-59 231.1 125 84.0
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.6e-58 228.8 125 82.4
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 2.6e-58 228.8 124 82.3
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 1.0e-57 226.9 124 82.3
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.3e-57 226.5 124 83.1
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 1.7e-57 226.1 124 82.3
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 3.2e-56 221.9 125 80.0
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 4.2e-56 221.5 124 81.5
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 1.2e-55 219.9 124 79.8
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 1.3e-54 216.5 124 77.4
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.3e-54 215.7 124 75.8
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 1.9e-53 212.6 155 66.5
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.5e-53 212.2 125 76.0
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 3.3e-53 211.8 124 76.6
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 2.8e-52 208.8 130 76.2
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 4.1e-51 204.9 124 74.2
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 5.3e-51 204.5 124 76.6
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 6.9e-51 204.1 124 73.4
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 2.0e-50 202.6 131 71.8
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.2e-49 199.1 139 66.9
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 5.0e-49 198.0 124 72.6
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 6.5e-49 197.6 124 72.6
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 9.4e-48 193.7 102 83.3
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.2e-47 193.4 124 70.2
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 6.1e-47 191.0 135 67.4
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 6.1e-47 191.0 125 69.6
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.4e-46 189.9 125 68.8
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 1.4e-46 189.9 125 68.8
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 3.9e-46 188.3 125 68.0
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.1e-45 186.8 125 66.4
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 4.4e-45 184.9 124 66.9
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 5.7e-45 184.5 127 66.9
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 1.7e-44 183.0 124 64.5
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 2.8e-44 182.2 125 71.2
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 3.7e-44 181.8 126 66.7
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 1.0e-41 173.7 123 62.6
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.3e-41 173.3 123 62.6
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 5.5e-40 167.9 133 58.6
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 7.2e-40 167.5 125 64.0
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 1.6e-39 166.4 125 63.2
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.6e-39 166.4 148 58.8
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 7.4e-37 157.5 166 51.8
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 1.1e-35 153.7 124 61.3
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.2e-34 150.2 109 58.7
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 7.7e-34 147.5 91 71.4
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 8.5e-33 144.1 124 57.3
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 8.5e-33 144.1 88 75.0
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.0e-30 137.1 125 54.4
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.8e-27 126.3 159 41.5
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.2e-25 119.4 137 44.5
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 2.9e-25 119.0 52 88.5
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 1.4e-22 110.2 64 82.8
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 4.0e-22 108.6 140 45.7
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.4e-21 105.5 57 75.4
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 7.5e-21 104.4 90 53.3
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 3.7e-20 102.1 125 39.2
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.4e-19 100.1 86 53.5
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 2.4e-19 99.4 124 39.5
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 4.1e-19 98.6 56 73.2
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 9.1e-19 97.4 55 69.1
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 9.1e-19 97.4 55 69.1
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 9.1e-19 97.4 63 74.6
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 2.3e-17 92.8 70 64.3
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 2.9e-17 92.4 53 69.8
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 2.5e-16 89.4 124 39.5
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 4.7e-15 85.1 125 38.4
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 1.8e-14 83.2 53 67.9
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 2.6e-13 79.3 45 75.6
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 7.5e-13 77.8 36 86.1
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 7.5e-13 77.8 126 39.7
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 2.2e-12 76.3 42 73.8
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.2e-12 76.3 123 33.3
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 3.1e-11 72.4 36 83.3
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 3.8e-09 65.5 129 33.3
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 5.0e-09 65.1 39 66.7
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 2.5e-08 62.8 37 73.0
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 5.6e-08 61.6 37 75.7
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 9.5e-08 60.8 34 85.3
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 1.8e-06 56.6 39 74.4
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 4.0e-06 55.5 29 75.9
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 5.2e-06 55.1 38 71.1


User provided reference genes

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