Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028853001 Vitis vinifera HOM05D003611 ORTHO05D004281 0.0e+00 1527.7 806 100.0
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 4.4e-86 323.6 1082 30.2
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 3.6e-80 303.9 1074 30.0
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 5.3e-79 300.1 1034 30.6
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 3.3e-73 280.8 957 29.0
Cfa016292 Carpinus fangiana HOM05D003611 ORTHO05D004281 2.1e-72 278.1 860 31.3
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 7.6e-70 269.6 916 31.3
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.3e-69 268.9 946 30.0
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 7.4e-65 253.1 1024 29.0
GSVIVG01026955001 Vitis vinifera HOM05D003611 ORTHO05D004281 1.1e-63 249.2 874 29.1
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 4.5e-62 243.8 1073 28.1
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 4.5e-62 243.8 1097 26.6
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 7.6e-62 243.0 937 29.2
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 5.0e-61 240.4 1081 27.0
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 3.6e-59 234.2 1046 27.2
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 1.3e-58 232.3 1049 26.8
Duzib205G1157 Durio zibethinus HOM05D003611 ORTHO05D011897 3.3e-57 227.6 757 31.3
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 9.7e-57 226.1 1074 27.0
Dinv35257 Davidia involucrata HOM05D003611 ORTHO05D004281 1.6e-56 225.3 911 27.9
Ciclev10006595m.g Citrus clementina HOM05D003611 ORTHO05D004281 2.8e-56 224.6 738 32.1
Haze_00050 Corylus avellana HOM05D003611 ORTHO05D004281 3.7e-56 224.2 806 29.7
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 4.8e-56 223.8 1067 26.3
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 4.1e-55 220.7 1003 27.3
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 2.0e-54 218.4 1098 26.0
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 2.6e-54 218.0 1088 25.1
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 1.7e-53 215.3 1079 27.0
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 2.9e-53 214.5 1076 26.0
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 1.1e-52 212.6 1071 27.0
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 2.5e-52 211.5 1018 27.2
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 2.7e-51 208.0 1051 26.7
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.0e-50 206.1 1053 26.8
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.8e-50 205.3 1033 27.0
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 6.7e-50 203.4 1059 26.2
QL09p012690 Quercus lobata HOM05D003611 ORTHO05D004281 1.1e-49 202.6 768 29.2
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 2.0e-49 201.8 1082 26.8
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 7.4e-49 199.9 677 30.0
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 1.7e-48 198.7 1011 25.9
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 2.8e-48 198.0 644 29.5
Duzib138G0252 Durio zibethinus HOM05D003611 ORTHO05D004281 3.7e-48 197.6 1000 26.4
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 1.1e-47 196.1 1046 26.9
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 2.4e-47 194.9 1083 26.0
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 5.3e-47 193.7 1042 25.2
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 3.4e-46 191.0 1068 26.2
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 5.9e-46 190.3 350 39.4
Lalb_Chr17g0339131 Lupinus albus HOM05D003611 ORTHO05D004281 7.7e-46 189.9 512 35.0
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 7.7e-46 189.9 1053 26.4
Thecc.03G184800 Theobroma cacao HOM05D003611 ORTHO05D011897 7.7e-46 189.9 745 29.0
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.3e-45 189.1 350 40.0
TWI23G0357 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.3e-45 189.1 725 30.5
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 5.0e-45 187.2 324 37.7
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 6.5e-45 186.8 1084 25.6
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 1.4e-44 185.7 1043 24.6
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 1.9e-44 185.3 350 38.9
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 3.2e-44 184.5 1050 26.0
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 7.2e-44 183.3 635 29.9
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 1.6e-43 182.2 340 39.4
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.7e-43 181.4 329 38.9
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.7e-43 181.4 672 28.3
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 4.7e-43 180.6 673 28.2
AUR62022609 Chenopodium quinoa HOM05D003611 ORTHO05D004281 6.1e-43 180.3 1005 26.1
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 6.1e-43 180.3 329 38.6
Actinidia10062 Actinidia chinensis HOM05D003611 ORTHO05D004281 7.9e-43 179.9 641 27.6
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 7.9e-43 179.9 691 28.2
Atru.chr1.351 Acer truncatum HOM05D003611 ORTHO05D004281 1.0e-42 179.5 787 28.1
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 1.0e-42 179.5 613 29.7
AUR62004403 Chenopodium quinoa HOM05D003611 ORTHO05D004281 1.0e-42 179.5 1011 25.6
Gohir.A11G012500 Gossypium hirsutum HOM05D003611 ORTHO05D011897 1.8e-42 178.7 730 29.5
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 3.0e-42 177.9 380 37.9
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 6.7e-42 176.8 1165 23.4
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 8.8e-42 176.4 671 27.9
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 8.8e-42 176.4 347 38.9
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 1.5e-41 175.6 1048 26.1
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.0e-41 175.3 671 27.7
Gohir.D11G011700 Gossypium hirsutum HOM05D003611 ORTHO05D011897 2.0e-41 175.3 742 29.8
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 3.3e-41 174.5 342 36.0
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 9.7e-41 172.9 1065 25.0
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 9.7e-41 172.9 330 39.4
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.3e-40 172.6 338 35.8
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 2.8e-40 171.4 879 27.9
Lsat_1_v5_gn_4_35681 Lactuca sativa HOM05D003611 ORTHO05D004281 4.8e-40 170.6 344 36.0
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 1.1e-39 169.5 308 40.6
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 2.4e-39 168.3 321 36.4
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 7.0e-39 166.8 342 37.4
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 1.2e-38 166.0 332 39.5
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.2e-38 166.0 318 38.4
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 2.6e-38 164.9 319 37.9
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 3.5e-38 164.5 618 27.7
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 3.5e-38 164.5 312 35.6
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 7.7e-38 163.3 341 37.5
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 7.7e-38 163.3 364 34.3
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 7.7e-38 163.3 336 34.8
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 1.7e-37 162.2 351 36.5
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 1.7e-37 162.2 1043 26.3
Gorai.007G013100 Gossypium raimondii HOM05D003611 ORTHO05D011897 1.7e-37 162.2 708 29.5
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 3.8e-37 161.0 325 36.6
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 6.5e-37 160.2 313 35.5
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 6.5e-37 160.2 308 37.7
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 1.1e-36 159.5 336 34.5
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 1.5e-36 159.1 322 37.0
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 2.5e-36 158.3 621 29.3
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 3.2e-36 157.9 332 36.1
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 4.2e-36 157.5 554 27.6
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 1.6e-35 155.6 709 27.1
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 1.6e-35 155.6 325 36.0
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 2.1e-35 155.2 336 34.8
SalBow3G4181 Salvia bowleyana HOM05D003611 ORTHO05D004281 2.1e-35 155.2 337 36.2
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 4.7e-35 154.1 336 38.1
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 6.1e-35 153.7 351 34.8
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 8.0e-35 153.3 331 33.8
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 8.0e-35 153.3 358 34.4
Hund27250 Selenicereus undatus HOM05D003611 ORTHO05D004281 8.0e-35 153.3 310 36.1
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 1.0e-34 152.9 875 25.5
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 1.8e-34 152.1 322 34.5
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 2.3e-34 151.8 325 34.5
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 3.0e-34 151.4 334 36.2
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 6.7e-34 150.2 640 28.3
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 8.8e-34 149.8 314 38.2
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 8.8e-34 149.8 329 35.6
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 7.5e-33 146.7 342 33.0
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 1.3e-32 146.0 520 29.0
HPP92_002731 Vanilla planifolia HOM05D003611 ORTHO05D004281 1.3e-32 146.0 544 30.9
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 2.8e-32 144.8 318 37.7
SGA_v2.0_scaffold4G02289 Striga asiatica HOM05D003611 ORTHO05D004281 2.8e-32 144.8 509 30.1
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 3.7e-32 144.4 347 33.7
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 1.1e-31 142.9 644 29.2
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 3.1e-31 141.4 879 26.1
Oeu015220.3 Olea europaea HOM05D003611 ORTHO05D004281 3.1e-31 141.4 828 24.3
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 3.1e-31 141.4 647 27.7
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 4.1e-31 141.0 879 26.1
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 4.1e-31 141.0 504 30.0
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 2.0e-30 138.7 885 25.9
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 2.0e-30 138.7 884 26.2
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 2.7e-30 138.3 881 26.1
BcaB05g23959 Brassica carinata HOM05D003611 ORTHO05D004281 2.2e-29 135.2 566 27.6
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 3.8e-29 134.4 326 33.1
Ah.05g180220 Amaranthus hybridus HOM05D003611 ORTHO05D004281 6.5e-29 133.7 364 31.9
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 6.5e-29 133.7 354 32.8
Aa31LG5G730 Aethionema arabicum HOM05D003611 ORTHO05D004281 1.9e-28 132.1 348 31.3
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 3.2e-28 131.3 323 36.8
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 1.6e-27 129.0 904 25.4
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 3.6e-27 127.9 212 40.6
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 1.4e-26 125.9 306 34.0
CDE09G0589 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 5.2e-26 124.0 322 31.7
CDE11G0274 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 6.8e-26 123.6 319 31.7
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 8.8e-26 123.2 323 31.6
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 3.4e-25 121.3 497 26.2
TAR374G1053 Trochodendron aralioides HOM05D003611 ORTHO05D004281 4.4e-25 120.9 123 56.9
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 7.5e-25 120.2 917 25.7
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 1.3e-24 119.4 917 25.7
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 1.3e-24 119.4 917 25.7
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 2.2e-24 118.6 497 26.6
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 3.1e-23 114.8 491 26.1
unitig_8.g3336 Utricularia gibba HOM05D003611 ORTHO05D004281 1.3e-21 109.4 312 32.1
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 2.5e-20 105.1 399 29.3
Hma1.2p1_0623F.1_g191000 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 3.2e-20 104.8 194 38.7
Lalb_Chr04g0259211 Lupinus albus HOM05D003611 ORTHO05D004281 6.1e-19 100.5 229 35.8
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 5.7e-17 94.0 776 23.5
Potri.004G073400 Populus trichocarpa HOM05D003611 ORTHO05D004281 4.9e-16 90.9 263 33.1
Prupe.2G301400 Prunus persica HOM05D010729 ORTHO05D011897 1.2e-14 86.3 732 25.8
MD01G1208800 Malus domestica HOM05D010729 ORTHO05D011897 1.6e-14 85.9 818 24.3
Sabra04G0048100 Salix brachista HOM05D003611 ORTHO05D011897 3.8e-13 81.3 265 32.1
Hund11716 Selenicereus undatus HOM05D003611 ORTHO05D026482 3.3e-12 78.2 346 28.0
TAR374G0905 Trochodendron aralioides HOM05D003611 ORTHO05D004281 3.3e-12 78.2 189 32.8
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 7.3e-12 77.0 455 25.7
Hma1.2p1_2961F.1_g330880 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 3.6e-11 74.7 114 43.0
SEGI_14695 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 2.3e-10 72.0 229 31.0
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 9.8e-09 66.6 78 47.4
Pp3c18_8750 Physcomitrium patens HOM05D025697 ORTHO05D004281 8.3e-08 63.5 201 31.3
RcHm_v2.0_Chr1g0378421 Rosa chinensis HOM05D010729 ORTHO05D011897 1.1e-07 63.2 575 23.8
Rhsim03G0191400 Rhododendron simsii HOM05D003611 ORTHO05D038142 1.4e-07 62.8 222 30.6
Mapoly0012s0024 Marchantia polymorpha HOM05D003611 ORTHO05D021332 1.6e-06 59.3 229 29.7
AUR62031425 Chenopodium quinoa HOM05D034504 ORTHO05D026482 2.7e-06 58.5 193 28.5
AUR62021117 Chenopodium quinoa HOM05D034504 ORTHO05D026482 3.5e-06 58.2 179 30.2


User provided reference genes

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