Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028765001 Vitis vinifera HOM05D005400 ORTHO05D006668 7.7e-67 256.9 121 100.0
GSVIVG01028757001 Vitis vinifera HOM05D005400 ORTHO05D006668 5.3e-52 207.6 124 79.8
GSVIVG01028763001 Vitis vinifera HOM05D005400 ORTHO05D006668 2.7e-48 195.3 124 76.6
Dinv35292 Davidia involucrata HOM05D005400 ORTHO05D006668 8.8e-39 163.7 124 62.9
Ciclev10004177m.g Citrus clementina HOM05D005400 ORTHO05D006668 1.6e-35 152.9 124 59.7
vmacro06593 Vaccinium macrocarpon HOM05D005400 ORTHO05D006668 3.5e-35 151.8 120 63.3
CiPaw.05G259500 Carya illinoinensis HOM05D005400 ORTHO05D006668 2.9e-34 148.7 124 56.5
Rhsim03G0196700 Rhododendron simsii HOM05D005400 ORTHO05D006668 6.6e-34 147.5 124 58.9
TAR374G0725 Trochodendron aralioides HOM05D005400 ORTHO05D006668 8.6e-34 147.1 124 58.1
Oeu037127.2 Olea europaea HOM05D005400 ORTHO05D006668 1.1e-33 146.7 119 60.5
MBI06_g29320_MAGBIO Magnolia biondii HOM05D005400 ORTHO05D006668 1.5e-33 146.4 124 58.9
Nn1g01753 Nelumbo nucifera HOM05D005400 ORTHO05D006668 1.9e-33 146.0 121 57.9
QL09p011755 Quercus lobata HOM05D005400 ORTHO05D006668 3.3e-33 145.2 124 57.3
Lj3C915G3 Lonicera japonica HOM05D005400 ORTHO05D006668 7.3e-33 144.1 110 60.9
THA.LOC104811936 Tarenaya hassleriana HOM05D005400 ORTHO05D006668 9.5e-33 143.7 123 57.7
BcaB08g35655 Brassica carinata HOM05D005400 ORTHO05D006668 1.2e-32 143.3 119 59.7
A10p10420 Brassica napus HOM05D005400 ORTHO05D006668 1.2e-32 143.3 119 59.7
BraA10t43124Z Brassica rapa HOM05D005400 ORTHO05D006668 1.2e-32 143.3 119 59.7
BcaC04g20520 Brassica carinata HOM05D005400 ORTHO05D006668 2.8e-32 142.1 119 58.8
C09p42650 Brassica napus HOM05D005400 ORTHO05D006668 2.8e-32 142.1 119 58.8
BolC9t57141H Brassica oleracea HOM05D005400 ORTHO05D006668 2.8e-32 142.1 119 58.8
Hma1.2p1_0142F.1_g064190 Hydrangea macrophylla HOM05D005400 ORTHO05D006668 2.8e-32 142.1 116 62.1
Aa31LG3G9160 Aethionema arabicum HOM05D005400 ORTHO05D006668 3.6e-32 141.7 124 54.8
Carub.0008s1311 Capsella rubella HOM05D005400 ORTHO05D006668 3.6e-32 141.7 119 58.0
Cfa016337 Carpinus fangiana HOM05D005400 ORTHO05D006668 3.6e-32 141.7 124 54.0
Eucgr.A02677 Eucalyptus grandis HOM05D005400 ORTHO05D006668 3.6e-32 141.7 114 62.3
Actinidia34175 Actinidia chinensis HOM05D005400 ORTHO05D006668 6.1e-32 141.0 116 59.5
CANSAT21G0517 Cannabis sativa HOM05D005400 ORTHO05D006668 8.0e-32 140.6 120 57.5
Prupe.2G304900 Prunus persica HOM05D005400 ORTHO05D006668 8.0e-32 140.6 124 57.3
Thhalv10012488m.g Eutrema salsugineum HOM05D005400 ORTHO05D006668 1.8e-31 139.4 119 58.0
FvH4_7g30740 Fragaria vesca HOM05D005400 ORTHO05D006668 1.8e-31 139.4 124 57.3
FAN01G1802 Fragaria x ananassa HOM05D005400 ORTHO05D006668 1.8e-31 139.4 124 57.3
FAN06G4050 Fragaria x ananassa HOM05D005400 ORTHO05D006668 1.8e-31 139.4 124 57.3
FAN06G5036 Fragaria x ananassa HOM05D005400 ORTHO05D006668 1.8e-31 139.4 124 57.3
MD01G1212700 Malus domestica HOM05D005400 ORTHO05D006668 1.8e-31 139.4 124 57.3
Potri.015G024300 Populus trichocarpa HOM05D005400 ORTHO05D006668 1.8e-31 139.4 124 55.6
QL09p011899 Quercus lobata HOM05D005400 ORTHO05D006668 2.3e-31 139.0 123 56.1
RcHm_v2.0_Chr1g0379691 Rosa chinensis HOM05D005400 ORTHO05D006668 2.3e-31 139.0 124 55.6
FAN03G3290 Fragaria x ananassa HOM05D005400 ORTHO05D006668 4.0e-31 138.3 114 61.4
Sabra15G0018800 Salix brachista HOM05D005400 ORTHO05D006668 4.0e-31 138.3 124 54.8
Sabra15G0021300 Salix brachista HOM05D005400 ORTHO05D006668 4.0e-31 138.3 124 54.8
Sp6g15090 Schrenkiella parvula HOM05D005400 ORTHO05D006668 5.2e-31 137.9 118 57.6
AL8G27410 Arabidopsis lyrata HOM05D005400 ORTHO05D006668 6.8e-31 137.5 119 58.0
Haze_00088 Corylus avellana HOM05D005400 ORTHO05D006668 6.8e-31 137.5 124 53.2
DCAR_020293 Daucus carota HOM05D005400 ORTHO05D006668 8.9e-31 137.1 119 58.0
Atru.BG.163.p Acer truncatum HOM05D005400 ORTHO05D006668 1.2e-30 136.7 123 57.7
CARHR265900 Cardamine hirsuta HOM05D005400 ORTHO05D006668 1.5e-30 136.3 119 55.5
Migut.F00258 Erythranthe guttata HOM05D005400 ORTHO05D006668 2.0e-30 136.0 124 58.9
CSS0002454 Camellia sinensis var. sinensis HOM05D005400 ORTHO05D006668 2.6e-30 135.6 109 61.5
CSS0023888 Camellia sinensis var. sinensis HOM05D005400 ORTHO05D006668 2.6e-30 135.6 109 61.5
Cpa.g.sc3.16 Carica papaya HOM05D005400 ORTHO05D006668 2.6e-30 135.6 124 56.5
PSO170G5128 Papaver somniferum HOM05D005400 ORTHO05D006668 2.6e-30 135.6 114 60.5
AT5G52910 Arabidopsis thaliana HOM05D005400 ORTHO05D006668 3.4e-30 135.2 119 56.3
Aqoxy5G04046 Aquilegia oxysepala HOM05D005400 ORTHO05D006668 4.4e-30 134.8 118 55.9
Sed0025455 Sechium edule HOM05D005400 ORTHO05D006668 4.4e-30 134.8 110 61.8
Nitab4.5_0002340g0020 Nicotiana tabacum HOM05D005400 ORTHO05D006668 5.7e-30 134.4 122 58.2
Lalb_Chr06g0161421 Lupinus albus HOM05D005400 ORTHO05D006668 7.5e-30 134.0 124 54.0
Phvul.007G077600 Phaseolus vulgaris HOM05D005400 ORTHO05D006668 7.5e-30 134.0 124 54.8
Nitab4.5_0001748g0020 Nicotiana tabacum HOM05D005400 ORTHO05D006668 1.7e-29 132.9 122 57.4
Manes.06G155000 Manihot esculenta HOM05D005400 ORTHO05D006668 2.9e-29 132.1 121 54.5
Thecc.03G189100 Theobroma cacao HOM05D005400 ORTHO05D006668 2.9e-29 132.1 116 57.8
Cc02_g02120 Coffea canephora HOM05D005400 ORTHO05D006668 4.9e-29 131.3 114 57.0
Glyma.20G164400 Glycine max HOM05D005400 ORTHO05D006668 4.9e-29 131.3 124 54.8
ClCG01G000730 Citrullus lanatus HOM05D005400 ORTHO05D006668 6.4e-29 131.0 110 60.0
MELO3C005855.2 Cucumis melo HOM05D005400 ORTHO05D006668 8.3e-29 130.6 116 59.5
Glyma.10G227900 Glycine max HOM05D005400 ORTHO05D006668 1.1e-28 130.2 124 54.0
CsaV3_5G000860 Cucumis sativus L. HOM05D005400 ORTHO05D006668 1.8e-28 129.4 121 56.2
ECA246G1245 Erigeron canadensis HOM05D005400 ORTHO05D006668 1.8e-28 129.4 119 58.0
PGR042G3191 Punica granatum HOM05D005400 ORTHO05D006668 3.2e-28 128.6 114 59.6
SGA_v2.0_scaffold44G16767 Striga asiatica HOM05D005400 ORTHO05D006668 3.2e-28 128.6 114 57.0
MSTRG.27059 Avicennia marina HOM05D005400 ORTHO05D006668 1.2e-27 126.7 124 54.8
Gohir.A12G254700 Gossypium hirsutum HOM05D005400 ORTHO05D006668 1.2e-27 126.7 117 56.4
CAN.G108.2 Capsicum annuum HOM05D005400 ORTHO05D006668 1.6e-27 126.3 122 57.4
PGSC0003DMG400006588 Solanum tuberosum HOM05D005400 ORTHO05D006668 2.0e-27 125.9 122 56.6
Peaxi162Scf00904g00467 Petunia axillaris HOM05D005400 ORTHO05D006668 3.5e-27 125.2 122 55.7
Hund04816 Selenicereus undatus HOM05D005400 ORTHO05D006668 3.5e-27 125.2 121 49.6
SalBow4G2614 Salvia bowleyana HOM05D005400 ORTHO05D006668 5.9e-27 124.4 113 58.4
Os05g0210500 Oryza sativa ssp. japonica HOM05D005400 ORTHO05D006668 1.3e-26 123.2 123 51.2
TWI14G1289 Tripterygium wilfordii HOM05D005400 ORTHO05D006668 3.0e-26 122.1 121 52.9
VMungo0720G2624 Vigna mungo HOM05D005400 ORTHO05D006668 3.0e-26 122.1 123 51.2
Solyc03g007800.3 Solanum lycopersicum HOM05D005400 ORTHO05D006668 3.9e-26 121.7 121 56.2
Psat6g194880 Pisum sativum HOM05D005400 ORTHO05D006668 6.6e-26 120.9 118 51.7
Sc13g0009410 Simmondsia chinensis HOM05D005400 ORTHO05D006668 6.6e-26 120.9 106 53.8
EL10Ac3g05372 Beta vulgaris HOM05D005400 ORTHO05D006668 8.6e-26 120.6 106 53.8
Lj5g0007861 Lotus japonicus HOM05D005400 ORTHO05D006668 1.1e-25 120.2 118 52.5
HanXRQChr05g0158761 Helianthus annuus HOM05D005400 ORTHO05D006668 1.5e-25 119.8 94 60.6
Duzib205G0693 Durio zibethinus HOM05D005400 ORTHO05D006668 1.9e-25 119.4 116 54.3
Sopen03g003730 Solanum pennellii HOM05D005400 ORTHO05D006668 1.9e-25 119.4 121 55.4
TPR.G7748 Trifolium pratense HOM05D005400 ORTHO05D006668 2.5e-25 119.0 118 50.8
Ah.07g206200 Amaranthus hybridus HOM05D005400 ORTHO05D006668 4.3e-25 118.2 116 50.9
Ca_10700_v3 Cicer arietinum L. HOM05D005400 ORTHO05D006668 5.6e-25 117.9 108 55.6
COL.COLO4_30250 Corchorus olitorius HOM05D005400 ORTHO05D006668 5.6e-25 117.9 127 48.0
Lsat_1_v5_gn_5_37621 Lactuca sativa HOM05D005400 ORTHO05D006668 7.3e-25 117.5 95 58.9
Medtr1g099370 Medicago truncatula HOM05D005400 ORTHO05D006668 9.5e-25 117.1 118 51.7
Zm00001eb296310 Zea mays HOM05D005400 ORTHO05D006668 9.5e-25 117.1 118 53.4
arahy.Tifrunner.gnm1.ann1.E9FCC2 Arachis hypogaea HOM05D005400 ORTHO05D006668 1.6e-24 116.3 130 47.7
arahy.Tifrunner.gnm1.ann1.B3EP0P Arachis hypogaea HOM05D005400 ORTHO05D006668 2.8e-24 115.5 121 49.6
SHI13742 Sapria himalayana HOM05D005400 ORTHO05D006668 1.8e-23 112.8 105 55.2
AUR62031458 Chenopodium quinoa HOM05D005400 ORTHO05D006668 3.1e-23 112.1 106 51.9
unitig_46.g18810 Utricularia gibba HOM05D005400 ORTHO05D006668 5.2e-23 111.3 108 52.8
ATR0721G161 Amborella trichopoda HOM05D005400 ORTHO05D006668 1.5e-22 109.8 110 50.0
AUR62021073 Chenopodium quinoa HOM05D005400 ORTHO05D006668 2.6e-22 109.0 118 48.3
Gorai.008G272300 Gossypium raimondii HOM05D005400 ORTHO05D006668 3.4e-22 108.6 96 55.2
Gohir.D12G254600 Gossypium hirsutum HOM05D005400 ORTHO05D006668 4.4e-22 108.2 96 54.2
SEGI_11166 Sequoiadendron giganteum HOM05D005400 ORTHO05D006668 3.0e-18 95.5 112 42.0
Mapoly0089s0007 Marchantia polymorpha HOM05D005400 ORTHO05D006668 1.2e-11 73.6 101 38.6
SMO353G0144 Selaginella moellendorffii HOM05D005400 ORTHO05D006668 2.1e-11 72.8 106 33.0
AagrBONN_evm.TU.Sc2ySwM_362.1589 Anthoceros agrestis HOM05D005400 ORTHO05D006668 3.5e-11 72.0 124 33.1
Pp3c8_21590 Physcomitrium patens HOM05D005400 ORTHO05D006668 6.8e-07 57.8 90 34.4


User provided reference genes

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