Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 3.0e-120 435.3 234 100.0
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 2.3e-91 339.3 225 76.9
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 4.3e-90 335.1 223 75.8
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 2.1e-89 332.8 223 73.5
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 3.6e-89 332.0 223 74.9
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 6.2e-89 331.3 230 73.9
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 2.6e-87 325.9 223 75.3
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 2.9e-86 322.4 226 75.2
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 4.9e-86 321.6 237 72.2
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 1.9e-85 319.7 230 73.9
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 1.9e-85 319.7 223 74.9
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 2.4e-85 319.3 223 73.5
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 2.4e-85 319.3 224 76.3
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 4.2e-85 318.5 223 73.1
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 7.1e-85 317.8 233 71.2
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 1.6e-84 316.6 222 75.2
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 2.7e-84 315.8 223 74.9
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 3.5e-84 315.5 224 74.1
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 4.6e-84 315.1 233 71.2
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 6.0e-84 314.7 225 74.7
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 7.8e-84 314.3 226 70.8
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.7e-83 313.2 225 72.4
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 2.3e-83 312.8 229 71.6
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 3.0e-83 312.4 223 69.5
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 3.0e-83 312.4 218 76.1
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 6.6e-83 311.2 223 72.2
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 1.5e-82 310.1 190 84.2
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 2.5e-82 309.3 219 75.3
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 3.3e-82 308.9 218 72.9
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 4.3e-82 308.5 220 72.3
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 7.3e-82 307.8 220 72.7
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 9.6e-82 307.4 238 69.7
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 1.6e-81 306.6 191 78.0
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 3.6e-81 305.4 209 73.2
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 8.1e-81 304.3 205 73.2
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 8.1e-81 304.3 205 73.2
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 1.1e-80 303.9 220 70.9
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.4e-80 303.5 225 71.6
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 2.4e-80 302.8 180 85.0
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 3.1e-80 302.4 193 76.2
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 4.0e-80 302.0 231 70.1
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.0e-80 302.0 223 70.4
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 9.0e-80 300.8 223 70.0
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.2e-79 300.4 223 70.0
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.2e-79 300.4 212 71.2
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.5e-79 300.1 223 70.0
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 2.6e-79 299.3 189 76.7
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 5.8e-79 298.1 223 69.5
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 5.8e-79 298.1 189 76.2
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 7.6e-79 297.7 217 72.4
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 8.4e-78 294.3 234 67.9
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 1.1e-77 293.9 221 68.8
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 7.1e-77 291.2 231 67.1
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 7.1e-77 291.2 220 70.9
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 9.3e-77 290.8 225 67.6
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 4.6e-76 288.5 192 75.5
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 6.0e-76 288.1 223 67.3
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 1.3e-75 287.0 208 72.1
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.8e-75 286.6 223 69.1
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 2.3e-75 286.2 230 68.3
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.3e-75 286.2 222 66.7
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 3.9e-75 285.4 227 67.4
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 6.7e-75 284.6 217 67.3
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 1.5e-74 283.5 217 66.8
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 1.9e-74 283.1 223 65.9
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 2.5e-74 282.7 217 67.3
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 3.3e-74 282.3 213 68.5
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.3e-73 280.4 185 75.1
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 3.6e-73 278.9 219 67.6
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 6.2e-73 278.1 178 78.7
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 9.0e-72 274.2 172 80.2
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.6e-71 272.7 223 65.9
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 5.8e-71 271.6 226 63.3
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 2.9e-70 269.2 218 66.5
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 3.8e-70 268.9 219 63.5
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 3.2e-69 265.8 213 65.3
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 7.1e-69 264.6 184 71.2
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 3.5e-68 262.3 195 70.8
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 4.6e-68 261.9 194 69.1
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 4.6e-68 261.9 175 74.9
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 4.6e-68 261.9 181 73.5
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 3.0e-67 259.2 175 74.3
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 8.7e-67 257.7 184 69.6
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 4.3e-66 255.4 194 70.6
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 1.6e-65 253.4 198 66.2
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 2.1e-65 253.1 177 71.2
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 2.1e-65 253.1 177 71.2
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 2.1e-65 253.1 233 60.5
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 2.1e-65 253.1 233 60.5
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.4e-64 250.4 163 74.2
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 1.4e-64 250.4 175 71.4
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.8e-64 250.0 223 62.8
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 1.8e-64 250.0 177 69.5
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 1.8e-64 250.0 225 59.6
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 4.0e-64 248.8 176 68.8
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 5.3e-64 248.4 174 70.7
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 9.0e-64 247.7 177 68.9
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 2.0e-63 246.5 219 59.8
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 2.0e-63 246.5 219 59.8
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 2.0e-63 246.5 219 59.8
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 1.3e-62 243.8 157 78.3
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 2.9e-62 242.7 219 58.0
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 2.9e-62 242.7 219 58.0
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 2.5e-61 239.6 182 68.1
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 9.3e-61 237.7 157 77.1
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.3e-59 233.8 156 75.6
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.3e-59 233.8 156 75.6
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.3e-59 233.0 156 75.0
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 3.0e-59 232.6 157 77.7
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 3.9e-59 232.3 171 64.9
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 6.7e-59 231.5 223 59.2
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 3.3e-58 229.2 157 77.7
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 7.4e-58 228.0 157 73.9
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 1.4e-56 223.8 157 75.8
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 1.4e-56 223.8 157 70.7
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 6.9e-56 221.5 155 69.0
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 1.2e-55 220.7 157 70.1
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 5.9e-55 218.4 157 73.2
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 5.0e-54 215.3 189 57.1
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 6.5e-54 214.9 157 70.1
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 2.5e-53 213.0 180 61.1
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 9.3e-53 211.1 172 64.5
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 9.3e-53 211.1 155 66.5
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 4.6e-52 208.8 156 69.9
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.0e-51 207.6 137 77.4
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 1.3e-51 207.2 147 70.7
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 2.3e-51 206.5 136 76.5
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 4.3e-50 202.2 181 58.0
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 1.6e-49 200.3 148 66.9
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 3.7e-49 199.1 125 81.6
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 4.8e-49 198.7 206 52.4
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 5.3e-48 195.3 144 72.9
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 5.9e-47 191.8 118 82.2
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 1.4e-45 187.2 183 53.0
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 1.4e-45 187.2 225 49.3
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 1.4e-45 187.2 225 49.3
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 1.0e-43 181.0 177 52.5
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 3.9e-43 179.1 137 65.7
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.4e-39 166.0 106 79.2
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 5.9e-39 165.2 180 52.8
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 7.7e-39 164.9 180 52.2
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.0e-38 164.5 106 78.3
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 5.5e-37 158.7 170 52.9
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 1.4e-35 154.1 157 49.7
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 6.7e-35 151.8 108 73.1
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 1.7e-25 120.6 183 43.2
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 4.1e-24 115.9 87 64.4
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 2.7e-20 103.2 204 33.3
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.6e-18 96.7 91 54.9
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.6e-18 96.7 91 54.9
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.3e-14 83.6 89 48.3
CSS0033495 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 8.6e-06 55.1 108 37.0


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