Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 1.3e-163 579.7 307 100.0
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.1e-114 417.2 293 73.4
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.9e-114 416.4 293 73.4
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 2.1e-113 412.9 295 70.5
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 2.3e-112 409.5 293 71.3
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 1.7e-110 403.3 305 69.8
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.2e-110 402.9 298 70.8
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.7e-110 402.1 296 69.6
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 4.9e-110 401.7 311 68.2
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.1e-108 396.4 295 70.5
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 2.1e-108 396.4 305 66.9
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.7e-108 396.0 303 65.0
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.7e-108 396.0 303 65.0
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.8e-108 394.4 303 65.0
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 1.0e-107 394.0 307 66.4
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 1.3e-107 393.7 303 64.7
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.3e-107 393.7 303 68.3
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 3.9e-107 392.1 299 65.6
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 5.1e-107 391.7 295 68.8
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 5.1e-107 391.7 295 69.8
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 5.1e-107 391.7 293 71.7
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 3.3e-106 389.0 296 66.2
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.3e-106 389.0 300 64.7
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 7.3e-106 387.9 252 75.0
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 4.7e-105 385.2 300 64.3
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 8.9e-104 380.9 293 68.3
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 2.6e-103 379.4 296 63.5
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 4.4e-103 378.6 291 65.3
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 5.8e-103 378.3 311 65.6
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 9.9e-103 377.5 290 65.9
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 1.7e-102 376.7 296 65.2
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.2e-102 376.3 296 66.6
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 3.8e-102 375.6 295 65.4
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 4.9e-102 375.2 299 63.9
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.1e-101 374.0 336 60.1
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.4e-101 373.6 299 64.2
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.4e-101 372.9 290 65.2
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 4.2e-101 372.1 303 69.3
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 5.4e-101 371.7 295 62.4
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 7.1e-101 371.3 296 63.9
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.2e-100 370.5 296 61.1
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 1.6e-100 370.2 304 63.5
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 2.1e-100 369.8 295 66.1
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 2.7e-100 369.4 295 62.4
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 2.7e-100 369.4 294 61.6
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 3.5e-100 369.0 294 66.7
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 4.6e-100 368.6 296 63.9
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 1.0e-99 367.5 306 62.4
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 2.3e-99 366.3 301 59.8
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 3.0e-99 365.9 297 61.6
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 3.0e-99 365.9 297 61.6
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 6.6e-99 364.8 297 66.0
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 1.1e-98 364.0 297 68.0
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 2.5e-98 362.8 297 59.3
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 3.3e-98 362.5 296 59.8
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.3e-98 362.1 300 68.0
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 9.6e-98 360.9 297 60.6
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 1.3e-97 360.5 295 63.4
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 8.1e-97 357.8 295 69.2
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 2.4e-96 356.3 316 60.4
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 9.0e-96 354.4 310 60.6
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 6.4e-94 348.2 295 63.1
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 2.7e-92 342.8 297 57.6
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 4.6e-92 342.0 315 55.9
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 3.9e-91 339.0 315 56.8
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 6.6e-91 338.2 315 56.5
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 6.6e-91 338.2 315 56.5
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 6.6e-91 338.2 300 60.0
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 8.7e-91 337.8 315 56.5
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 8.7e-91 337.8 315 56.5
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 2.5e-90 336.3 315 56.5
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 4.3e-90 335.5 315 55.9
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 2.8e-89 332.8 303 61.4
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.6e-89 332.4 302 57.0
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 6.2e-89 331.6 313 55.9
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 6.2e-89 331.6 297 56.9
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 1.4e-88 330.5 307 60.3
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 2.4e-88 329.7 314 55.7
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 2.4e-88 329.7 316 56.0
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 4.0e-88 328.9 306 56.9
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 9.0e-88 327.8 299 64.9
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 1.2e-87 327.4 308 57.8
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 1.7e-86 323.6 294 58.2
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 2.2e-86 323.2 314 54.8
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 8.4e-86 321.2 297 63.6
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 3.2e-85 319.3 283 59.0
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 1.6e-84 317.0 293 62.8
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.3e-83 313.9 204 77.0
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 1.9e-82 310.1 278 56.5
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 4.3e-82 308.9 264 59.5
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 6.2e-81 305.1 294 61.2
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 2.0e-79 300.1 265 57.0
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 7.6e-79 298.1 259 59.1
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 2.2e-78 296.6 257 58.4
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 8.4e-78 294.7 302 56.6
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 1.1e-77 294.3 294 59.2
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 7.9e-76 288.1 272 56.2
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 8.7e-75 284.6 309 54.4
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 5.7e-74 282.0 203 68.5
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.0e-67 261.2 242 62.4
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 1.0e-67 261.2 305 49.2
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 7.2e-61 238.4 233 53.2
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.6e-58 229.9 305 49.8
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 1.2e-52 211.1 187 63.6
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 6.7e-51 205.3 271 45.4
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 5.7e-50 202.2 299 47.5
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 6.3e-49 198.7 207 57.0
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.4e-48 196.8 304 40.5
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 3.8e-46 189.5 134 70.9
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 3.2e-45 186.4 268 40.7
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.6e-44 184.1 297 42.1
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 1.7e-41 174.1 263 39.5
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 5.0e-38 162.5 119 68.9
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 2.5e-37 160.2 178 49.4
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 1.6e-36 157.5 300 36.0
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 6.8e-35 152.1 126 61.9
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 8.8e-35 151.8 129 59.7
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 8.8e-35 151.8 282 35.8
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.4e-34 149.8 177 48.6
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.7e-33 147.5 177 48.0
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 6.3e-33 145.6 110 69.1
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 2.2e-30 137.1 124 55.6
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.8e-28 130.2 303 33.3
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 4.9e-25 119.4 120 52.5
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.3e-22 111.3 125 57.6
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.5e-21 107.8 66 74.2
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 8.0e-20 102.1 158 41.1
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.4e-19 101.3 150 38.7
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.2e-18 98.2 92 54.3
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 5.9e-15 85.9 100 49.0
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.4e-11 74.7 77 58.4
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 2.2e-09 67.4 61 60.7
Nn3g19050 Nelumbo nucifera HOM05D000974 ORTHO05D007456 7.8e-07 58.9 90 37.8
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.3e-06 58.2 65 50.8


User provided reference genes

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