Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 4.2e-99 364.8 196 100.0
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 5.3e-41 171.8 212 51.4
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 5.3e-41 171.8 213 55.9
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 1.4e-38 163.7 156 64.7
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 3.5e-37 159.1 207 56.0
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 4.6e-37 158.7 143 65.7
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 7.9e-37 157.9 217 49.3
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 1.3e-36 157.1 190 52.6
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 1.8e-36 156.8 213 51.2
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 3.0e-36 156.0 220 48.2
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 3.9e-36 155.6 209 52.2
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 5.1e-36 155.2 140 65.7
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 8.7e-36 154.5 195 51.8
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 8.7e-36 154.5 203 50.7
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 1.9e-35 153.3 200 52.5
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 3.3e-35 152.5 163 60.1
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 3.3e-35 152.5 206 50.5
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 7.4e-35 151.4 195 50.3
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.3e-34 150.6 156 57.1
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 1.6e-34 150.2 222 54.1
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 2.1e-34 149.8 154 61.0
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 6.2e-34 148.3 154 61.0
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 8.1e-34 147.9 141 65.2
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 1.4e-33 147.1 209 50.7
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.4e-33 146.4 149 59.1
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 2.4e-33 146.4 166 55.4
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 5.3e-33 145.2 207 48.8
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 6.9e-33 144.8 207 47.3
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 1.5e-32 143.7 156 57.1
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 1.5e-32 143.7 154 59.1
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.0e-32 143.3 149 58.4
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 2.6e-32 142.9 200 51.0
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 2.6e-32 142.9 109 76.1
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 2.6e-32 142.9 162 62.3
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 3.4e-32 142.5 194 47.9
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 4.5e-32 142.1 151 57.6
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 1.3e-31 140.6 124 64.5
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 1.3e-31 140.6 148 60.1
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 1.7e-31 140.2 107 73.8
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 3.8e-31 139.0 144 56.2
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 3.8e-31 139.0 164 53.0
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 3.8e-31 139.0 140 60.7
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 6.4e-31 138.3 169 55.0
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 6.4e-31 138.3 140 60.0
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 6.4e-31 138.3 140 60.7
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 8.4e-31 137.9 140 58.6
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 8.4e-31 137.9 146 61.6
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.1e-30 137.5 168 54.2
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.4e-30 137.1 222 50.9
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.4e-30 137.1 116 66.4
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 1.4e-30 137.1 186 50.0
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 1.9e-30 136.7 144 59.0
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 5.5e-30 135.2 99 72.7
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 7.1e-30 134.8 132 63.6
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 7.1e-30 134.8 169 53.3
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 7.1e-30 134.8 169 53.3
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 1.6e-29 133.7 102 72.5
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 2.1e-29 133.3 148 58.8
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 2.1e-29 133.3 223 47.5
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 2.7e-29 132.9 153 56.9
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 3.5e-29 132.5 132 62.9
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 4.6e-29 132.1 170 50.6
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 4.6e-29 132.1 131 59.5
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 4.6e-29 132.1 199 48.7
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 6.0e-29 131.7 139 57.6
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 6.0e-29 131.7 142 57.7
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 7.9e-29 131.3 146 52.7
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 1.0e-28 131.0 102 72.5
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 1.8e-28 130.2 147 57.1
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.8e-28 130.2 145 56.6
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 1.1e-27 127.5 124 60.5
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.5e-27 126.3 129 59.7
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 3.3e-27 125.9 142 53.5
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 3.3e-27 125.9 130 58.5
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 9.6e-27 124.4 121 62.8
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 2.8e-26 122.9 125 56.0
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 3.7e-26 122.5 132 58.3
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 4.8e-26 122.1 137 56.9
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 1.4e-25 120.6 105 65.7
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 2.4e-25 119.8 125 60.0
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 2.4e-25 119.8 90 66.7
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 3.1e-25 119.4 105 61.9
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 6.9e-25 118.2 99 69.7
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 9.0e-25 117.9 100 64.0
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 9.0e-25 117.9 125 58.4
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.0e-24 116.7 118 61.9
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 2.0e-24 116.7 137 52.6
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 3.4e-24 115.9 164 44.5
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 4.5e-24 115.5 125 57.6
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 7.6e-24 114.8 81 71.6
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 1.0e-23 114.4 128 55.5
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 1.3e-23 114.0 128 55.5
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 1.3e-23 114.0 125 58.4
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 1.7e-23 113.6 128 55.5
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 2.2e-23 113.2 76 76.3
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 4.9e-23 112.1 202 42.1
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 4.9e-23 112.1 135 60.7
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 1.9e-22 110.2 148 48.0
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 1.9e-22 110.2 179 46.9
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 2.5e-22 109.8 123 55.3
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 2.5e-22 109.8 80 72.5
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 2.7e-21 106.3 181 42.0
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 6.0e-21 105.1 120 51.7
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 1.0e-20 104.4 128 52.3
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 2.3e-20 103.2 123 54.5
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 2.3e-20 103.2 72 77.8
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 8.7e-20 101.3 111 51.4
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 8.7e-20 101.3 99 57.6
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 7.4e-19 98.2 77 63.6
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 1.6e-18 97.1 124 47.6
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 4.1e-17 92.4 71 67.6
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 4.1e-17 92.4 163 41.7
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 4.1e-17 92.4 126 47.6
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 5.3e-17 92.0 161 39.1
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 5.3e-17 92.0 120 47.5
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 4.5e-16 89.0 166 38.0
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 2.2e-15 86.7 159 40.3
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 6.5e-15 85.1 103 47.6
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 1.9e-14 83.6 110 47.3
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 5.5e-14 82.0 100 55.0
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 5.5e-14 82.0 100 55.0
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 5.5e-14 82.0 110 46.4
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 7.2e-14 81.6 98 56.1
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 7.2e-14 81.6 98 56.1
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 1.0e-12 77.8 62 64.5
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 1.0e-12 77.8 90 56.7
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 4.8e-10 68.9 91 47.3
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 4.1e-09 65.9 69 49.3


User provided reference genes

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