Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028521001 Vitis vinifera HOM05D000513 ORTHO05D439416 1.4e-44 182.6 94 100.0
ClCG01G001420 Citrullus lanatus HOM05D000513 ORTHO05D004203 1.4e-07 59.7 39 66.7
CsaV3_5G001560 Cucumis sativus L. HOM05D000513 ORTHO05D004203 1.4e-07 59.7 39 66.7
MELO3C005795.2 Cucumis melo HOM05D000513 ORTHO05D004203 1.8e-07 59.3 39 66.7
Hund24807 Selenicereus undatus HOM05D000513 ORTHO05D004203 1.8e-07 59.3 42 61.9
Rhsim03G0214900 Rhododendron simsii HOM05D000513 ORTHO05D004203 2.4e-07 58.9 38 65.8
Hund21054 Selenicereus undatus HOM05D000513 ORTHO05D004203 2.4e-07 58.9 38 65.8
Sc01g0010840 Simmondsia chinensis HOM05D000513 ORTHO05D004203 2.4e-07 58.9 45 60.0
CiPaw.12G075900 Carya illinoinensis HOM05D000513 ORTHO05D004203 3.1e-07 58.5 41 63.4
GSVIVG01019680001 Vitis vinifera HOM05D000513 ORTHO05D004203 3.1e-07 58.5 38 68.4
Lalb_Chr02g0149541 Lupinus albus HOM05D000513 ORTHO05D004203 4.1e-07 58.2 57 47.4
Sabra11G0136800 Salix brachista HOM05D000513 ORTHO05D004203 4.1e-07 58.2 44 59.1
Sabra11G0148500 Salix brachista HOM05D000513 ORTHO05D004203 4.1e-07 58.2 44 59.1
vmacro06437 Vaccinium macrocarpon HOM05D000513 ORTHO05D004203 4.1e-07 58.2 38 65.8
AUR62007078 Chenopodium quinoa HOM05D000513 ORTHO05D004203 5.3e-07 57.8 44 59.1
Duzib084G1375 Durio zibethinus HOM05D000513 ORTHO05D004203 5.3e-07 57.8 44 59.1
Cfa011899 Carpinus fangiana HOM05D000513 ORTHO05D004203 6.9e-07 57.4 41 63.4
ECA236G0550 Erigeron canadensis HOM05D000513 ORTHO05D004203 6.9e-07 57.4 38 65.8
Solyc08g083320.4 Solanum lycopersicum HOM05D000513 ORTHO05D004203 6.9e-07 57.4 44 61.4
Sopen08g031530 Solanum pennellii HOM05D000513 ORTHO05D004203 6.9e-07 57.4 44 61.4
PGSC0003DMG400012111 Solanum tuberosum HOM05D000513 ORTHO05D004203 6.9e-07 57.4 44 61.4
Aqoxy1G01623 Aquilegia oxysepala HOM05D000513 ORTHO05D004203 9.1e-07 57.0 38 65.8
Aqoxy5G04134 Aquilegia oxysepala HOM05D000513 ORTHO05D004203 9.1e-07 57.0 38 65.8
Cpa.g.sc37.97 Carica papaya HOM05D000513 ORTHO05D004203 9.1e-07 57.0 38 65.8
COL.COLO4_10828 Corchorus olitorius HOM05D000513 ORTHO05D004203 9.1e-07 57.0 44 59.1
COL.COLO4_15571 Corchorus olitorius HOM05D000513 ORTHO05D004203 9.1e-07 57.0 44 59.1
Lj9C607T19 Lonicera japonica HOM05D000513 ORTHO05D004203 9.1e-07 57.0 42 61.9
Manes.01G055700 Manihot esculenta HOM05D000513 ORTHO05D004203 9.1e-07 57.0 41 63.4
Manes.02G001000 Manihot esculenta HOM05D000513 ORTHO05D004203 9.1e-07 57.0 38 68.4
Potri.001G449500 Populus trichocarpa HOM05D000513 ORTHO05D004203 9.1e-07 57.0 44 59.1
PGR031G3834 Punica granatum HOM05D000513 ORTHO05D004203 9.1e-07 57.0 38 65.8
Sed0000131 Sechium edule HOM05D000513 ORTHO05D004203 9.1e-07 57.0 38 63.2
Sed0017553 Sechium edule HOM05D000513 ORTHO05D004203 9.1e-07 57.0 38 63.2
TAR629G2888 Trochodendron aralioides HOM05D000513 ORTHO05D004203 9.1e-07 57.0 38 65.8
Nn3g18870 Nelumbo nucifera HOM05D000513 ORTHO05D004203 1.2e-06 56.6 38 65.8
PGR042G1812 Punica granatum HOM05D000513 ORTHO05D004203 1.2e-06 56.6 38 60.5
DCAR_008624 Daucus carota HOM05D000513 ORTHO05D004203 1.5e-06 56.2 42 59.5
Duzib138G1238 Durio zibethinus HOM05D000513 ORTHO05D004203 1.5e-06 56.2 38 63.2
Gohir.A12G241600 Gossypium hirsutum HOM05D000513 ORTHO05D004203 1.5e-06 56.2 44 59.1
Gohir.D12G242900 Gossypium hirsutum HOM05D000513 ORTHO05D004203 1.5e-06 56.2 44 59.1
Gorai.008G260100 Gossypium raimondii HOM05D000513 ORTHO05D004203 1.5e-06 56.2 44 59.1
Lsat_1_v5_gn_2_73301 Lactuca sativa HOM05D000513 ORTHO05D004203 1.5e-06 56.2 44 59.1
Sabra16G0303300 Salix brachista HOM05D000513 ORTHO05D004203 1.5e-06 56.2 43 55.8
CSS0037992 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D004203 2.0e-06 55.8 38 63.2
AUR62019941 Chenopodium quinoa HOM05D000513 ORTHO05D004203 2.0e-06 55.8 39 61.5
Dinv12895 Davidia involucrata HOM05D000513 ORTHO05D004203 2.0e-06 55.8 38 65.8
Nitab4.5_0003419g0070 Nicotiana tabacum HOM05D000513 ORTHO05D004203 2.0e-06 55.8 44 56.8
THA.LOC104806459 Tarenaya hassleriana HOM05D000513 ORTHO05D004203 2.0e-06 55.8 38 65.8
GSVIVG01027437001 Vitis vinifera HOM05D000513 ORTHO05D004203 2.0e-06 55.8 38 63.2
CANSAT56G0796 Cannabis sativa HOM05D000513 ORTHO05D004203 2.6e-06 55.5 38 63.2
Gohir.A09G187900 Gossypium hirsutum HOM05D000513 ORTHO05D004203 2.6e-06 55.5 44 54.5
Gohir.D09G182700 Gossypium hirsutum HOM05D000513 ORTHO05D004203 2.6e-06 55.5 44 54.5
Gorai.006G205000 Gossypium raimondii HOM05D000513 ORTHO05D004203 2.6e-06 55.5 44 54.5
Medtr8g024340 Medicago truncatula HOM05D000513 ORTHO05D004203 2.6e-06 55.5 39 61.5
Thecc.03G217900 Theobroma cacao HOM05D000513 ORTHO05D004203 2.6e-06 55.5 44 56.8
HPP92_014632 Vanilla planifolia HOM05D000513 ORTHO05D004203 2.6e-06 55.5 38 63.2
Atru.chr9.1862 Acer truncatum HOM05D000513 ORTHO05D004203 3.4e-06 55.1 38 63.2
CAN.G567.105 Capsicum annuum HOM05D000513 ORTHO05D004203 3.4e-06 55.1 44 56.8
Duzib068G0934 Durio zibethinus HOM05D000513 ORTHO05D004203 3.4e-06 55.1 43 58.1
Nn1g00434 Nelumbo nucifera HOM05D000513 ORTHO05D004203 3.4e-06 55.1 37 64.9
PSO063G4604 Papaver somniferum HOM05D000513 ORTHO05D004203 3.4e-06 55.1 41 58.5
PSO782G4812 Papaver somniferum HOM05D000513 ORTHO05D004203 3.4e-06 55.1 41 58.5
QL02p027352 Quercus lobata HOM05D000513 ORTHO05D004203 3.4e-06 55.1 38 63.2
ATR0304G017 Amborella trichopoda HOM05D000513 ORTHO05D004203 4.5e-06 54.7 38 63.2
MSTRG.24867 Avicennia marina HOM05D000513 ORTHO05D004203 4.5e-06 54.7 44 56.8
BcaB03g13709 Brassica carinata HOM05D000513 ORTHO05D004203 4.5e-06 54.7 44 56.8
BcaC05g27819 Brassica carinata HOM05D000513 ORTHO05D004203 4.5e-06 54.7 44 56.8
A05p24500 Brassica napus HOM05D000513 ORTHO05D004203 4.5e-06 54.7 44 56.8
C05p38190 Brassica napus HOM05D000513 ORTHO05D004203 4.5e-06 54.7 44 56.8
BolC5t32547H Brassica oleracea HOM05D000513 ORTHO05D004203 4.5e-06 54.7 44 56.8
BraA05t21339Z Brassica rapa HOM05D000513 ORTHO05D004203 4.5e-06 54.7 44 56.8
CARHR032230 Cardamine hirsuta HOM05D000513 ORTHO05D004203 4.5e-06 54.7 44 56.8
Ciclev10019349m.g Citrus clementina HOM05D000513 ORTHO05D004203 4.5e-06 54.7 38 60.5
Dinv29216 Davidia involucrata HOM05D000513 ORTHO05D004203 4.5e-06 54.7 44 59.1
Glyma.07G049900 Glycine max HOM05D000513 ORTHO05D004203 4.5e-06 54.7 39 61.5
MD00G1136700 Malus domestica HOM05D000513 ORTHO05D246186 4.5e-06 54.7 41 58.5
MD07G1159300 Malus domestica HOM05D000513 ORTHO05D004203 4.5e-06 54.7 41 58.5
Nitab4.5_0002520g0080 Nicotiana tabacum HOM05D000513 ORTHO05D004203 4.5e-06 54.7 44 56.8
Potri.011G152200 Populus trichocarpa HOM05D000513 ORTHO05D004203 4.5e-06 54.7 38 63.2
QL08p047180 Quercus lobata HOM05D000513 ORTHO05D004203 4.5e-06 54.7 41 58.5
Rhsim02G0253600 Rhododendron simsii HOM05D000513 ORTHO05D004203 4.5e-06 54.7 37 64.9
Atru.chr5.765 Acer truncatum HOM05D000513 ORTHO05D004203 5.9e-06 54.3 41 58.5
CANSAT21G0008 Cannabis sativa HOM05D000513 ORTHO05D004203 5.9e-06 54.3 38 63.2
CDE11G1030 Ceratophyllum demersum HOM05D000513 ORTHO05D004203 5.9e-06 54.3 38 63.2
Migut.H02246 Erythranthe guttata HOM05D000513 ORTHO05D004203 5.9e-06 54.3 38 60.5
Glyma.16G018500 Glycine max HOM05D000513 ORTHO05D004203 5.9e-06 54.3 45 55.6
HanXRQChr04g0119781 Helianthus annuus HOM05D000513 ORTHO05D004203 5.9e-06 54.3 38 60.5
Sc13g0010240 Simmondsia chinensis HOM05D000513 ORTHO05D004203 5.9e-06 54.3 38 60.5
SGA_v2.0_scaffold104G30254 Striga asiatica HOM05D000513 ORTHO05D004203 5.9e-06 54.3 38 60.5
CSS0004941 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D004203 7.7e-06 53.9 38 60.5
Cc08_g16970 Coffea canephora HOM05D000513 ORTHO05D004203 7.7e-06 53.9 44 54.5
Psat0s3561g0040 Pisum sativum HOM05D000513 ORTHO05D004203 7.7e-06 53.9 39 59.0
SEGI_13884 Sequoiadendron giganteum HOM05D000513 ORTHO05D004203 7.7e-06 53.9 41 58.5
TPR.G19833 Trifolium pratense HOM05D000513 ORTHO05D004203 7.7e-06 53.9 39 59.0
vmacro06435 Vaccinium macrocarpon HOM05D000513 ORTHO05D004203 7.7e-06 53.9 38 60.5


User provided reference genes

Program Settings