Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 3.1e-125 451.8 231 100.0
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 9.9e-23 111.3 207 42.5
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 2.2e-22 110.2 206 41.3
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.8e-19 100.5 194 39.7
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.4e-16 90.9 131 46.6
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 1.0e-14 84.7 186 38.2
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 2.9e-14 83.2 183 37.7
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 1.1e-13 81.3 186 36.0
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 3.2e-13 79.7 172 41.3
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 9.3e-13 78.2 192 34.9
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 9.3e-13 78.2 100 50.0
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 1.2e-12 77.8 155 39.4
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 2.1e-12 77.0 191 38.2
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 6.0e-12 75.5 225 34.7
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 1.0e-11 74.7 130 40.0
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.3e-11 74.3 188 33.5
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 1.8e-11 73.9 149 36.9
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.8e-11 73.9 170 37.6
Potri.014G192701 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.8e-11 73.9 165 38.2
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 2.3e-11 73.6 186 36.0
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 3.0e-11 73.2 185 33.0
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 3.0e-11 73.2 149 37.6
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 1.9e-10 70.5 132 43.9
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 2.5e-10 70.1 231 32.9
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 4.3e-10 69.3 159 34.6
Gohir.A07G152000 Gossypium hirsutum HOM05D014916 ORTHO05D009575 5.7e-10 68.9 175 36.6
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 5.7e-10 68.9 192 33.3
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 9.7e-10 68.2 135 42.2
Psat6g107200 Pisum sativum HOM05D016547 ORTHO05D009575 1.3e-09 67.8 136 39.7
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 2.8e-09 66.6 207 30.0
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 3.7e-09 66.2 176 33.5
Glyma.10G040300 Glycine max HOM05D016547 ORTHO05D009575 6.3e-09 65.5 181 35.4
Gohir.D07G158200 Gossypium hirsutum HOM05D014916 ORTHO05D009575 6.3e-09 65.5 171 34.5
Gorai.001G181400 Gossypium raimondii HOM05D014916 ORTHO05D009575 6.3e-09 65.5 171 34.5
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 8.2e-09 65.1 180 31.7
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 1.4e-08 64.3 179 33.0
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 2.4e-08 63.5 202 34.2
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 3.1e-08 63.2 164 37.8
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 3.1e-08 63.2 178 33.7
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 4.1e-08 62.8 202 32.7
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 4.1e-08 62.8 131 38.2
VMungo0720G0558 Vigna mungo HOM05D016547 ORTHO05D009575 4.1e-08 62.8 149 33.6
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 5.3e-08 62.4 153 37.3
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 5.3e-08 62.4 204 34.3
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 5.3e-08 62.4 210 31.0
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 5.3e-08 62.4 146 35.6
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 1.2e-07 61.2 205 31.2
Prupe.8G216000 Prunus persica HOM05D017729 ORTHO05D022643 1.2e-07 61.2 204 32.8
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 2.6e-07 60.1 190 33.2
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 2.6e-07 60.1 185 31.4
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 3.4e-07 59.7 179 31.8
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 3.4e-07 59.7 182 31.3
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 4.5e-07 59.3 149 36.2
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 1.0e-06 58.2 148 34.5
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 1.3e-06 57.8 137 37.2
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 1.3e-06 57.8 179 30.2
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 1.7e-06 57.4 147 36.1
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.7e-06 57.4 145 34.5
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.2e-06 57.0 125 38.4
Psat6g131320 Pisum sativum HOM05D012468 ORTHO05D009575 2.2e-06 57.0 59 47.5
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 2.9e-06 56.6 190 32.1
FvH4_2g20360 Fragaria vesca HOM05D017729 ORTHO05D022643 3.8e-06 56.2 183 38.3
CDE01G0186 Ceratophyllum demersum HOM05D008157 ORTHO05D009575 5.0e-06 55.8 194 31.4
Lj5g0016645 Lotus japonicus HOM05D016547 ORTHO05D009575 5.0e-06 55.8 61 52.5


User provided reference genes

Program Settings