Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 3.2e-41 171.4 90 100.0
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.4e-33 146.0 88 80.7
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 5.4e-33 144.1 88 81.8
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 7.0e-33 143.7 87 82.8
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 1.6e-32 142.5 87 81.6
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 2.1e-32 142.1 88 78.4
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 2.1e-32 142.1 88 78.4
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 77.8
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 6.0e-32 140.6 88 77.3
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 6.0e-32 140.6 88 77.3
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 78.9
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 1.0e-31 139.8 88 76.1
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 1.7e-31 139.0 88 76.1
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 2.3e-31 138.7 88 79.5
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 3.0e-31 138.3 84 82.1
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 3.0e-31 138.3 88 77.3
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 3.9e-31 137.9 87 79.3
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 3.9e-31 137.9 86 80.2
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 5.1e-31 137.5 88 77.3
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 5.1e-31 137.5 87 78.2
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 5.1e-31 137.5 87 75.9
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 6.6e-31 137.1 88 76.1
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 6.6e-31 137.1 87 75.9
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 6.6e-31 137.1 87 75.9
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 6.6e-31 137.1 88 76.1
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 8.6e-31 136.7 88 76.1
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 8.6e-31 136.7 88 76.1
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 1.1e-30 136.3 88 76.1
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 1.1e-30 136.3 90 76.7
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 1.1e-30 136.3 90 75.6
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 1.5e-30 136.0 88 75.0
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.5e-30 136.0 88 77.3
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 1.5e-30 136.0 87 74.7
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 1.5e-30 136.0 87 78.2
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 1.9e-30 135.6 88 75.0
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.9e-30 135.6 88 73.9
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.9e-30 135.6 88 73.9
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 2.5e-30 135.2 88 75.0
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 2.5e-30 135.2 90 73.3
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 75.6
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 3.3e-30 134.8 88 73.9
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 3.3e-30 134.8 88 75.0
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 4.3e-30 134.4 90 74.4
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 4.3e-30 134.4 88 75.0
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 4.3e-30 134.4 86 77.9
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 5.6e-30 134.0 88 73.9
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 5.6e-30 134.0 88 73.9
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 5.6e-30 134.0 88 73.9
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 5.6e-30 134.0 87 75.9
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 5.6e-30 134.0 88 75.0
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 5.6e-30 134.0 88 77.3
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 7.3e-30 133.7 90 72.2
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 7.3e-30 133.7 88 73.9
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 7.3e-30 133.7 88 72.7
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 7.3e-30 133.7 88 75.0
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 9.5e-30 133.3 88 72.7
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 74.4
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 9.5e-30 133.3 87 73.6
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 9.5e-30 133.3 88 75.0
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 1.2e-29 132.9 88 72.7
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 1.2e-29 132.9 88 72.7
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 1.6e-29 132.5 88 75.0
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 1.6e-29 132.5 88 72.7
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.6e-29 132.5 88 71.6
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 2.1e-29 132.1 87 74.7
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 2.1e-29 132.1 88 73.9
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 2.1e-29 132.1 88 75.0
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 2.8e-29 131.7 90 72.2
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 2.8e-29 131.7 87 74.7
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 4.7e-29 131.0 88 69.3
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 4.7e-29 131.0 90 72.2
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 4.7e-29 131.0 88 72.7
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 6.2e-29 130.6 90 72.2
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 6.2e-29 130.6 87 72.4
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 1.1e-28 129.8 88 70.5
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.4e-28 129.4 88 69.3
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 1.8e-28 129.0 88 71.6
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.8e-28 129.0 90 70.0
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 2.3e-28 128.6 88 68.2
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 5.2e-28 127.5 89 73.0
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 5.2e-28 127.5 89 73.0
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 6.8e-28 127.1 100 65.0
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 6.8e-28 127.1 86 75.6
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 8.9e-28 126.7 88 70.5
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 8.9e-28 126.7 95 68.4
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 1.2e-27 126.3 86 72.1
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.5e-27 125.9 84 76.2
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 2.6e-27 125.2 88 67.0
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 3.4e-27 124.8 92 68.5
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.4e-27 124.4 87 67.8
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 5.8e-27 124.0 89 71.9
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 5.8e-27 124.0 86 69.8
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 5.8e-27 124.0 88 67.0
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 9.9e-27 123.2 88 65.9
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 1.3e-26 122.9 88 63.6
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 1.3e-26 122.9 95 67.4
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 2.2e-26 122.1 88 71.6
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 3.7e-26 121.3 121 54.5
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 7.1e-25 117.1 84 67.9
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 2.3e-23 112.1 72 76.4
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 8.6e-23 110.2 70 78.6
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 1.9e-22 109.0 86 68.6
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 2.5e-22 108.6 86 67.4
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 3.3e-22 108.2 69 78.3
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 6.2e-21 104.0 73 71.2
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 1.4e-20 102.8 89 59.6
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.8e-20 102.4 66 80.3
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 3.1e-20 101.7 66 72.7
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 4.0e-20 101.3 68 72.1
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 6.8e-20 100.5 63 79.4
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 6.8e-20 100.5 71 74.6
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 8.9e-20 100.1 70 68.6
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 2.0e-19 99.0 72 68.1
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 5.8e-19 97.4 69 68.1
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 9.9e-19 96.7 59 78.0
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.3e-18 96.3 80 68.8
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 2.2e-18 95.5 55 78.2
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 2.9e-18 95.1 77 67.5
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 7.8e-16 87.0 63 71.4
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 3.3e-14 81.6 89 49.4
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 2.8e-13 78.6 91 41.8
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 4.4e-11 71.2 53 66.0
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.8e-10 68.2 45 71.1
Aa31LG11G3540 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.3e-06 54.7 31 71.0


User provided reference genes

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