Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028335001 Vitis vinifera HOM05D004208 ORTHO05D005156 1.3e-261 906.0 485 100.0
TAR636G1466 Trochodendron aralioides HOM05D004208 ORTHO05D005156 7.3e-201 704.1 487 76.4
Dinv22405 Davidia involucrata HOM05D004208 ORTHO05D005156 1.5e-198 696.4 492 74.8
Thecc.01G258100 Theobroma cacao HOM05D004208 ORTHO05D005156 1.1e-196 690.3 487 73.9
Gohir.D08G208600 Gossypium hirsutum HOM05D004208 ORTHO05D005156 8.6e-194 680.6 487 73.7
Duzib138G0474 Durio zibethinus HOM05D004208 ORTHO05D005156 2.5e-193 679.1 487 73.3
Gorai.004G221000 Gossypium raimondii HOM05D004208 ORTHO05D005156 5.6e-193 677.9 487 73.5
Gohir.A08G190100 Gossypium hirsutum HOM05D004208 ORTHO05D005156 6.8e-191 671.0 487 73.5
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla HOM05D004208 ORTHO05D005156 8.9e-191 670.6 489 75.3
Lj2A1151T32 Lonicera japonica HOM05D004208 ORTHO05D005156 7.6e-190 667.5 495 73.1
COL.COLO4_05893 Corchorus olitorius HOM05D004208 ORTHO05D005156 5.4e-188 661.4 496 71.0
Actinidia07297 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.0e-186 657.1 492 72.0
Actinidia25791 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.0e-186 657.1 506 71.1
CSS0041954 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 1.7e-186 656.4 492 72.4
CSS0038412 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 1.1e-185 653.7 492 72.4
Duzib133G1203 Durio zibethinus HOM05D004208 ORTHO05D005156 5.6e-185 651.4 487 70.2
Manes.12G032400 Manihot esculenta HOM05D004208 ORTHO05D005156 2.1e-184 649.4 487 71.0
Cfa012194 Carpinus fangiana HOM05D004208 ORTHO05D005156 9.0e-183 644.0 462 74.5
PGR031G1029 Punica granatum HOM05D004208 ORTHO05D005156 1.5e-182 643.3 488 68.9
Atru.chr5.1689 Acer truncatum HOM05D004208 ORTHO05D005156 7.6e-182 641.0 486 72.4
CiPaw.11G131900 Carya illinoinensis HOM05D004208 ORTHO05D005156 4.2e-180 635.2 462 73.2
CANSAT01G2107 Cannabis sativa HOM05D004208 ORTHO05D005156 2.1e-179 632.9 493 68.6
Manes.13G034400 Manihot esculenta HOM05D004208 ORTHO05D005156 2.3e-178 629.4 487 67.1
Haze_08822 Corylus avellana HOM05D004208 ORTHO05D005156 3.3e-177 625.5 494 69.4
Potri.002G038300 Populus trichocarpa HOM05D004208 ORTHO05D005156 8.1e-176 620.9 489 70.6
QL12p032241 Quercus lobata HOM05D004208 ORTHO05D005156 4.0e-175 618.6 461 74.8
Prupe.8G223600 Prunus persica HOM05D004208 ORTHO05D005156 1.5e-174 616.7 487 67.1
Potri.005G224500 Populus trichocarpa HOM05D004208 ORTHO05D005156 6.4e-173 611.3 489 69.3
Sed0003224 Sechium edule HOM05D004208 ORTHO05D005156 3.2e-172 609.0 488 66.8
Sopen01g041810 Solanum pennellii HOM05D004208 ORTHO05D005156 3.2e-172 609.0 499 65.3
CDE03G0182 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 4.2e-172 608.6 486 65.0
PSO339G3828 Papaver somniferum HOM05D004208 ORTHO05D005156 4.2e-172 608.6 489 67.7
Solyc01g098230.3 Solanum lycopersicum HOM05D004208 ORTHO05D005156 1.2e-171 607.1 499 65.1
Ciclev10019992m.g Citrus clementina HOM05D004208 ORTHO05D005156 3.5e-171 605.5 487 70.0
CAN.G134.214 Capsicum annuum HOM05D004208 ORTHO05D005156 1.3e-170 603.6 494 64.8
CsaV3_5G028820 Cucumis sativus L. HOM05D004208 ORTHO05D005156 6.7e-170 601.3 488 65.6
TWI32G0756 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 6.7e-170 601.3 487 67.4
AUR62030125 Chenopodium quinoa HOM05D004208 ORTHO05D005156 5.6e-169 598.2 488 65.0
Peaxi162Scf00225g00519 Petunia axillaris HOM05D004208 ORTHO05D005156 3.7e-168 595.5 511 64.0
AUR62038602 Chenopodium quinoa HOM05D004208 ORTHO05D005156 1.8e-167 593.2 488 65.0
Sed0002598 Sechium edule HOM05D004208 ORTHO05D005156 6.9e-167 591.3 488 65.0
Sabra05G0173200 Salix brachista HOM05D004208 ORTHO05D005156 3.4e-166 589.0 504 65.7
Nn3g19657 Nelumbo nucifera HOM05D004208 ORTHO05D005156 7.6e-166 587.8 487 68.0
Migut.O00608 Erythranthe guttata HOM05D004208 ORTHO05D005156 2.2e-165 586.3 497 63.8
Ah.03g147410 Amaranthus hybridus HOM05D004208 ORTHO05D005156 3.8e-165 585.5 490 63.9
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 4.9e-165 585.1 486 63.2
Migut.N01348 Erythranthe guttata HOM05D004208 ORTHO05D005156 9.3e-164 580.9 497 63.4
Eucgr.G01944 Eucalyptus grandis HOM05D004208 ORTHO05D005156 2.1e-163 579.7 418 72.5
RcHm_v2.0_Chr6g0288111 Rosa chinensis HOM05D004208 ORTHO05D005156 3.5e-163 578.9 487 65.9
AT2G36070 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 1.0e-162 577.4 486 62.6
FAN17G2653 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.8e-162 576.6 487 64.3
Sabra02G0030700 Salix brachista HOM05D004208 ORTHO05D005156 3.9e-162 575.5 462 69.7
Dinv34629 Davidia involucrata HOM05D004208 ORTHO05D005156 5.1e-162 575.1 430 72.8
AL4G32160 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 3.3e-161 572.4 486 62.1
TAR362G0204 Trochodendron aralioides HOM05D004208 ORTHO05D005156 7.4e-161 571.2 444 70.3
Cc01_g18340 Coffea canephora HOM05D004208 ORTHO05D005156 1.3e-160 570.5 498 61.8
Rhsim01G0263600 Rhododendron simsii HOM05D004208 ORTHO05D005156 1.3e-160 570.5 493 64.9
Actinidia09547 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.6e-160 570.1 493 64.5
FvH4_4g12040 Fragaria vesca HOM05D004208 ORTHO05D005156 1.6e-160 570.1 487 63.9
Nitab4.5_0000245g0150 Nicotiana tabacum HOM05D004208 ORTHO05D005156 4.8e-160 568.5 489 63.6
Ah.02g120380 Amaranthus hybridus HOM05D004208 ORTHO05D005156 3.1e-159 565.8 490 62.7
Glyma.04G107400 Glycine max HOM05D004208 ORTHO05D005156 5.3e-159 565.1 487 64.3
HanXRQChr16g0512021 Helianthus annuus HOM05D004208 ORTHO05D005156 9.0e-159 564.3 496 65.3
Lsat_1_v5_gn_7_79121 Lactuca sativa HOM05D004208 ORTHO05D005156 9.0e-159 564.3 493 63.1
SalBow1G3185 Salvia bowleyana HOM05D004208 ORTHO05D005156 1.2e-158 563.9 491 62.3
EL10Ac7g17258 Beta vulgaris HOM05D004208 ORTHO05D005156 1.3e-157 560.5 440 66.4
FAN07G0785 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.2e-157 559.7 518 59.8
ATR0736G190 Amborella trichopoda HOM05D004208 ORTHO05D005156 2.9e-157 559.3 492 61.6
MBI10_g22594_MAGBIO Magnolia biondii HOM05D004208 ORTHO05D005156 4.9e-157 558.5 466 67.4
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 6.5e-157 558.1 479 62.8
FvH4_2g21470 Fragaria vesca HOM05D004208 ORTHO05D005156 1.1e-156 557.4 487 63.9
MD05G1197100 Malus domestica HOM05D004208 ORTHO05D005156 2.5e-156 556.2 495 62.4
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.3e-156 554.3 473 62.8
Phvul.005G002100 Phaseolus vulgaris HOM05D004208 ORTHO05D005156 3.5e-155 552.4 487 63.4
Carub.0004s1781 Capsella rubella HOM05D004208 ORTHO05D005156 3.0e-154 549.3 486 60.3
DCAR_005689 Daucus carota HOM05D004208 ORTHO05D005156 5.1e-154 548.5 506 59.5
Thhalv10001977m.g Eutrema salsugineum HOM05D004208 ORTHO05D005156 1.1e-153 547.4 486 60.7
FAN15G2877 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.5e-153 546.2 510 59.6
Psat7g228960 Pisum sativum HOM05D004208 ORTHO05D005156 3.3e-153 545.8 487 60.8
SGA_v2.0_scaffold32G13335 Striga asiatica HOM05D004208 ORTHO05D005156 4.3e-153 545.4 494 62.6
AL3G53520 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 9.7e-153 544.3 487 60.0
Peaxi162Scf00225g00527 Petunia axillaris HOM05D004208 ORTHO05D005156 1.3e-152 543.9 494 61.1
MSTRG.16949 Avicennia marina HOM05D004208 ORTHO05D005156 8.2e-152 541.2 491 60.9
Oeu062471.2 Olea europaea HOM05D004208 ORTHO05D005156 4.1e-151 538.9 544 58.6
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.7e-149 533.5 465 62.6
Aqoxy2G03649 Aquilegia oxysepala HOM05D004208 ORTHO05D005156 8.5e-149 531.2 490 58.4
VMungo1080G0701 Vigna mungo HOM05D004208 ORTHO05D005156 2.5e-148 529.6 496 61.1
Ca_26001_v3 Cicer arietinum L. HOM05D004208 ORTHO05D005156 1.6e-147 526.9 494 59.5
SGA_v2.0_scaffold58G20323 Striga asiatica HOM05D004208 ORTHO05D005156 3.6e-147 525.8 407 68.1
Eucgr.B01552 Eucalyptus grandis HOM05D004208 ORTHO05D005156 4.6e-147 525.4 507 60.4
arahy.Tifrunner.gnm1.ann1.W57KUE Arachis hypogaea HOM05D004208 ORTHO05D005156 2.3e-146 523.1 520 58.1
THA.LOC104805532 Tarenaya hassleriana HOM05D004208 ORTHO05D005156 1.1e-145 520.8 491 60.7
Cpa.g.sc81.94 Carica papaya HOM05D004208 ORTHO05D005156 3.3e-145 519.2 461 62.5
Nitab4.5_0001165g0160 Nicotiana tabacum HOM05D004208 ORTHO05D005156 7.4e-145 518.1 453 62.5
Sp3g33730 Schrenkiella parvula HOM05D004208 ORTHO05D005156 7.4e-145 518.1 487 58.3
TWI34G1830 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 1.3e-144 517.3 490 58.8
AT2G20510 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 2.2e-144 516.5 487 59.1
Medtr2g083690 Medicago truncatula HOM05D004208 ORTHO05D005156 2.9e-141 506.1 487 57.7
Lalb_Chr15g0090311 Lupinus albus HOM05D004208 ORTHO05D005156 1.9e-140 503.4 496 60.1
MELO3C033986.2 Cucumis melo HOM05D004208 ORTHO05D005156 2.5e-140 503.1 589 50.8
BcaB07g31584 Brassica carinata HOM05D004208 ORTHO05D005156 5.5e-140 501.9 479 56.6
BraA09t36939Z Brassica rapa HOM05D004208 ORTHO05D005156 7.2e-140 501.5 491 57.8
RcHm_v2.0_Chr4g0409381 Rosa chinensis HOM05D004208 ORTHO05D005156 1.6e-139 500.4 428 62.6
BcaB03g16846 Brassica carinata HOM05D004208 ORTHO05D005156 6.1e-139 498.4 491 57.0
A09p12940 Brassica napus HOM05D004208 ORTHO05D005156 1.8e-138 496.9 487 57.7
C09p15320 Brassica napus HOM05D004208 ORTHO05D005156 2.3e-138 496.5 488 57.4
CSS0015888 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 3.3e-137 492.7 462 62.8
A07p00220 Brassica napus HOM05D004208 ORTHO05D005156 4.4e-137 492.3 491 56.4
BraA07t27815Z Brassica rapa HOM05D004208 ORTHO05D005156 4.4e-137 492.3 492 56.7
BcaC04g22784 Brassica carinata HOM05D004208 ORTHO05D005156 7.4e-137 491.5 488 56.4
BolC9t54440H Brassica oleracea HOM05D004208 ORTHO05D005156 2.8e-136 489.6 491 56.0
CDE04G1955 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 2.4e-135 486.5 389 64.3
Carub.0003s3496 Capsella rubella HOM05D004208 ORTHO05D005156 3.1e-135 486.1 487 56.9
BcaC06g36740 Brassica carinata HOM05D004208 ORTHO05D005156 2.0e-134 483.4 488 57.8
BolC7t40497H Brassica oleracea HOM05D004208 ORTHO05D005156 3.4e-134 482.6 489 57.7
HPP92_012187 Vanilla planifolia HOM05D004208 ORTHO05D005156 3.8e-133 479.2 449 57.9
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea HOM05D004208 ORTHO05D005156 6.5e-133 478.4 486 56.6
FAN12G3775 Fragaria x ananassa HOM05D004208 ORTHO05D005156 6.5e-133 478.4 535 53.1
FAN12G0345 Fragaria x ananassa HOM05D004208 ORTHO05D005156 8.5e-133 478.0 535 53.1
CARHR130310 Cardamine hirsuta HOM05D004208 ORTHO05D005156 1.6e-131 473.8 486 55.1
Medtr4g075680 Medicago truncatula HOM05D004208 ORTHO05D005156 8.0e-131 471.5 486 54.1
ECA236G3853 Erigeron canadensis HOM05D004208 ORTHO05D000364 1.4e-130 470.7 465 58.9
BcaB08g34912 Brassica carinata HOM05D004208 ORTHO05D005156 5.7e-129 465.3 473 54.1
Zm00001eb111900 Zea mays HOM05D004208 ORTHO05D005156 1.7e-128 463.8 471 55.2
TPR.G5025 Trifolium pratense HOM05D004208 ORTHO05D005156 1.8e-127 460.3 403 59.3
C07p00510 Brassica napus HOM05D004208 ORTHO05D005156 5.3e-127 458.8 488 55.9
Oeu042777.2 Olea europaea HOM05D004208 ORTHO05D005156 2.9e-125 453.0 498 54.4
Medtr4g029490 Medicago truncatula HOM05D004208 ORTHO05D005156 3.5e-118 429.5 487 52.4
Os07g0409700 Oryza sativa ssp. japonica HOM05D004208 ORTHO05D005156 2.3e-114 416.8 469 51.0
Peaxi162Scf00118g00111 Petunia axillaris HOM05D004208 ORTHO05D005156 4.8e-112 409.1 396 59.8
Lj6g0013651 Lotus japonicus HOM05D004208 ORTHO05D005156 3.3e-108 396.4 487 48.9
Nitab4.5_0001526g0060 Nicotiana tabacum HOM05D004208 ORTHO05D005156 7.2e-108 395.2 452 52.7
Nitab4.5_0007798g0030 Nicotiana tabacum HOM05D004208 ORTHO05D005156 7.5e-105 385.2 491 49.5
SEGI_36648 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 5.0e-101 372.5 412 52.7
Oeu021968.1 Olea europaea HOM05D004208 ORTHO05D005156 1.5e-100 370.9 482 49.0
PGSC0003DMG400022489 Solanum tuberosum HOM05D004208 ORTHO05D005156 2.5e-100 370.2 213 82.6
Sc05g0000700 Simmondsia chinensis HOM05D004208 ORTHO05D005156 1.8e-98 364.0 344 61.9
SMO353G0191 Selaginella moellendorffii HOM05D004208 ORTHO05D005156 2.0e-97 360.5 448 47.3
ClCG01G005870 Citrullus lanatus HOM05D004208 ORTHO05D005156 6.4e-96 355.5 213 78.9
CBR_g30902 Chara braunii HOM05D004208 ORTHO05D005156 8.3e-96 355.1 450 43.6
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 9.2e-95 351.7 412 50.0
Pp3c4_19960 Physcomitrium patens HOM05D004208 ORTHO05D005156 2.3e-93 347.1 350 52.9
Mapoly0070s0010 Marchantia polymorpha HOM05D004208 ORTHO05D005156 1.9e-92 344.0 365 49.9
AagrBONN_evm.TU.Sc2ySwM_344.3623 Anthoceros agrestis HOM05D004208 ORTHO05D005156 2.4e-87 327.0 311 53.7
Pp3c12_7570 Physcomitrium patens HOM05D004208 ORTHO05D005156 1.0e-85 321.6 368 48.9
unitig_746.g26574 Utricularia gibba HOM05D004208 ORTHO05D005156 2.2e-80 303.9 222 64.4
Lalb_Chr06g0171061 Lupinus albus HOM05D004208 ORTHO05D005156 7.8e-70 268.9 176 72.7
Lalb_Chr06g0171071 Lupinus albus HOM05D004208 ORTHO05D005156 6.9e-58 229.2 316 52.2
Actinidia37513 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.2e-54 218.4 156 70.5
HanXRQChr10g0294161 Helianthus annuus HOM05D004208 ORTHO05D005156 7.9e-54 215.7 218 58.7
SEGI_05587 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 7.4e-52 209.1 135 71.1
SHI09778 Sapria himalayana HOM05D004208 ORTHO05D005156 3.5e-46 190.3 271 46.1
MCO02G332 Micromonas commoda HOM05D004208 ORTHO05D005156 6.0e-46 189.5 247 40.1
Cre16.g660800 Chlamydomonas reinhardtii HOM05D004208 ORTHO05D005156 1.9e-36 157.9 246 34.6
PRCOL_00004598 Prasinoderma coloniale HOM05D004208 ORTHO05D005156 4.8e-35 153.3 190 40.0
RcHm_v2.0_Chr5g0013581 Rosa chinensis HOM05D004208 ORTHO05D005156 1.0e-29 135.6 95 65.3
CAN.G279.25 Capsicum annuum HOM05D004208 ORTHO05D005156 1.3e-27 128.6 230 41.3
Glyma.09G002800 Glycine max HOM05D004208 ORTHO05D005156 5.9e-25 119.8 76 71.1
SEGI_40921 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 1.2e-22 112.1 70 71.4
Rhsim01G0263500 Rhododendron simsii HOM05D004208 ORTHO05D005156 7.9e-22 109.4 122 54.9
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 4.8e-19 100.1 115 52.2
Atru.chr3.4028 Acer truncatum HOM05D004208 ORTHO05D005156 2.6e-17 94.4 52 82.7
Cfa026408 Carpinus fangiana HOM05D004208 ORTHO05D121639 2.6e-17 94.4 244 27.0
QL04p049599 Quercus lobata HOM05D000196 ORTHO05D000279 9.7e-12 75.9 43 83.7
CDE04G1040 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 1.2e-09 68.9 94 41.5
MD09G1008600 Malus domestica HOM05D004208 ORTHO05D005156 8.5e-08 62.8 74 45.9
HanXRQChr10g0299451 Helianthus annuus HOM05D004208 ORTHO05D219928 3.2e-07 60.8 71 39.4
FvH4_3g18772 Fragaria vesca HOM05D004208 ORTHO05D198159 7.2e-07 59.7 68 47.1


User provided reference genes

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