Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028281001 Vitis vinifera HOM05D002855 ORTHO05D010889 6.0e-79 297.4 142 100.0
GSVIVG01028282001 Vitis vinifera HOM05D002855 ORTHO05D010889 2.3e-62 242.3 116 99.1
GSVIVG01028273001 Vitis vinifera HOM05D002855 ORTHO05D010889 2.2e-44 182.6 94 89.4
Thecc.01G328900 Theobroma cacao HOM05D002855 ORTHO05D010889 4.5e-34 148.3 94 67.0
Duzib138G1744 Durio zibethinus HOM05D002855 ORTHO05D010889 2.5e-32 142.5 94 64.9
TAR626G0883 Trochodendron aralioides HOM05D002855 ORTHO05D010889 5.5e-32 141.4 94 66.0
Gohir.D07G137200 Gossypium hirsutum HOM05D002855 ORTHO05D010889 7.2e-32 141.0 94 63.8
Gorai.001G149400 Gossypium raimondii HOM05D002855 ORTHO05D010889 2.7e-31 139.0 94 63.8
Gohir.A07G132900 Gossypium hirsutum HOM05D002855 ORTHO05D010889 3.6e-31 138.7 94 61.7
Manes.05G006100 Manihot esculenta HOM05D002855 ORTHO05D010889 1.4e-30 136.7 92 65.2
Duzib133G0713 Durio zibethinus HOM05D002855 ORTHO05D010889 2.3e-30 136.0 94 60.6
Atru.chr5.818 Acer truncatum HOM05D002855 ORTHO05D010889 4.0e-30 135.2 93 69.9
Cpa.g.sc57.57 Carica papaya HOM05D002855 ORTHO05D010889 6.7e-30 134.4 94 62.8
Potri.014G109600 Populus trichocarpa HOM05D002855 ORTHO05D010889 1.2e-29 133.7 93 64.5
Gohir.D11G107600 Gossypium hirsutum HOM05D002855 ORTHO05D010889 2.6e-29 132.5 94 59.6
Gorai.007G115300 Gossypium raimondii HOM05D002855 ORTHO05D010889 2.6e-29 132.5 94 59.6
Ciclev10019422m.g Citrus clementina HOM05D002855 ORTHO05D010889 4.4e-29 131.7 94 62.8
COL.COLO4_23086 Corchorus olitorius HOM05D002855 ORTHO05D010889 4.4e-29 131.7 94 59.6
TAR627G1028 Trochodendron aralioides HOM05D002855 ORTHO05D010889 9.7e-29 130.6 93 64.5
Nn1g08405 Nelumbo nucifera HOM05D002855 ORTHO05D010889 1.3e-28 130.2 94 61.7
Gohir.A11G103100 Gossypium hirsutum HOM05D002855 ORTHO05D010889 8.2e-28 127.5 94 57.4
Sabra14G0080900 Salix brachista HOM05D002855 ORTHO05D010889 2.4e-27 125.9 92 63.0
TWI59G1182 Tripterygium wilfordii HOM05D002855 ORTHO05D010889 3.1e-27 125.6 92 63.0
Potri.002G184000 Populus trichocarpa HOM05D002855 ORTHO05D010889 9.1e-27 124.0 92 60.9
Sabra02G0131700 Salix brachista HOM05D002855 ORTHO05D010889 4.5e-26 121.7 92 58.7
PSO063G0629 Papaver somniferum HOM05D002855 ORTHO05D010889 1.0e-25 120.6 94 56.4
PSO782G3303 Papaver somniferum HOM05D002855 ORTHO05D010889 1.0e-25 120.6 94 56.4
Aqoxy181s003 Aquilegia oxysepala HOM05D002855 ORTHO05D010889 9.4e-24 114.0 92 57.6
Aqoxy4G00130 Aquilegia oxysepala HOM05D002855 ORTHO05D010889 9.4e-24 114.0 92 57.6
ATR1136G190 Amborella trichopoda HOM05D002855 ORTHO05D010889 1.0e-22 110.5 92 57.6
THA.LOC104801336 Tarenaya hassleriana HOM05D002855 ORTHO05D010889 8.8e-22 107.5 94 50.0
HPP92_017853 Vanilla planifolia HOM05D002855 ORTHO05D010889 1.3e-20 103.6 92 48.9
Carub.0001s0132 Capsella rubella HOM05D002855 ORTHO05D010889 1.4e-19 100.1 94 43.6
AL1G11620 Arabidopsis lyrata HOM05D002855 ORTHO05D010889 9.1e-19 97.4 94 43.6
AT1G02290 Arabidopsis thaliana HOM05D002855 ORTHO05D010889 1.6e-18 96.7 94 43.6
Os08g0500500 Oryza sativa ssp. japonica HOM05D002855 ORTHO05D010889 1.6e-18 96.7 92 46.7
SEGI_10134 Sequoiadendron giganteum HOM05D002855 ORTHO05D010889 7.7e-18 94.4 92 50.0
Sp1g01370 Schrenkiella parvula HOM05D002855 ORTHO05D010889 2.9e-17 92.4 94 42.6
MBI05_g19645_MAGBIO Magnolia biondii HOM05D002855 ORTHO05D004406 8.6e-17 90.9 94 41.5
ClCG02G020560 Citrullus lanatus HOM05D002855 ORTHO05D004406 1.1e-16 90.5 83 47.0
ATR0594G221 Amborella trichopoda HOM05D002855 ORTHO05D004406 1.5e-16 90.1 82 47.6
MELO3C025710.2 Cucumis melo HOM05D002855 ORTHO05D004406 1.5e-16 90.1 83 47.0
Thhalv10009871m.g Eutrema salsugineum HOM05D002855 ORTHO05D010889 1.5e-16 90.1 94 40.4
CiPaw.13G103000 Carya illinoinensis HOM05D002855 ORTHO05D004406 5.5e-16 88.2 92 40.2
CsaV3_6G022000 Cucumis sativus L. HOM05D002855 ORTHO05D004406 5.5e-16 88.2 83 45.8
COL.COLO4_18410 Corchorus olitorius HOM05D002855 ORTHO05D004406 9.5e-16 87.4 92 40.2
QL01p035172 Quercus lobata HOM05D002855 ORTHO05D004406 9.5e-16 87.4 83 43.4
Sed0021885 Sechium edule HOM05D002855 ORTHO05D004406 9.5e-16 87.4 94 41.5
SEGI_18775 Sequoiadendron giganteum HOM05D002855 ORTHO05D004406 9.5e-16 87.4 94 42.6
Gohir.D05G099500 Gossypium hirsutum HOM05D002855 ORTHO05D004406 1.2e-15 87.0 92 42.4
Gorai.009G103400 Gossypium raimondii HOM05D002855 ORTHO05D004406 1.2e-15 87.0 92 42.4
Hma1.2p1_0035F.1_g021730 Hydrangea macrophylla HOM05D002855 ORTHO05D004406 1.2e-15 87.0 90 43.3
MSTRG.18613 Avicennia marina HOM05D002855 ORTHO05D004406 2.1e-15 86.3 83 45.8
MBI14_g42162_MAGBIO Magnolia biondii HOM05D002855 ORTHO05D004406 2.1e-15 86.3 92 42.4
Cfa011411 Carpinus fangiana HOM05D002855 ORTHO05D004406 2.8e-15 85.9 83 43.4
CiPaw.13G102800 Carya illinoinensis HOM05D002855 ORTHO05D004406 2.8e-15 85.9 92 39.1
Duzib168G0993 Durio zibethinus HOM05D002855 ORTHO05D004406 2.8e-15 85.9 92 40.2
PGSC0003DMG400015522 Solanum tuberosum HOM05D002855 ORTHO05D004406 2.8e-15 85.9 124 39.5
EL10Ac7g15933 Beta vulgaris HOM05D002855 ORTHO05D004406 3.6e-15 85.5 92 39.1
FvH4_3g34430 Fragaria vesca HOM05D002855 ORTHO05D004406 3.6e-15 85.5 92 42.4
FAN11G1910 Fragaria x ananassa HOM05D002855 ORTHO05D004406 3.6e-15 85.5 92 42.4
FAN16G1875 Fragaria x ananassa HOM05D002855 ORTHO05D004406 3.6e-15 85.5 92 42.4
FAN21G1667 Fragaria x ananassa HOM05D002855 ORTHO05D004406 3.6e-15 85.5 92 42.4
Manes.11G137500 Manihot esculenta HOM05D002855 ORTHO05D004406 3.6e-15 85.5 90 43.3
Solyc11g072810.2 Solanum lycopersicum HOM05D002855 ORTHO05D004406 3.6e-15 85.5 124 39.5
Sopen11g030480 Solanum pennellii HOM05D002855 ORTHO05D004406 3.6e-15 85.5 124 39.5
Ciclev10027686m.g Citrus clementina HOM05D002855 ORTHO05D004406 4.7e-15 85.1 125 36.0
Haze_23986 Corylus avellana HOM05D002855 ORTHO05D004406 4.7e-15 85.1 83 43.4
Haze_23987 Corylus avellana HOM05D002855 ORTHO05D004406 4.7e-15 85.1 83 43.4
Duzib170G0969 Durio zibethinus HOM05D002855 ORTHO05D004406 4.7e-15 85.1 92 40.2
Actinidia37270 Actinidia chinensis HOM05D002855 ORTHO05D004406 6.1e-15 84.7 93 39.8
Hund18948 Selenicereus undatus HOM05D002855 ORTHO05D004406 6.1e-15 84.7 83 43.4
Cc01_g11990 Coffea canephora HOM05D002855 ORTHO05D004406 8.0e-15 84.3 83 44.6
Gohir.D08G009200 Gossypium hirsutum HOM05D002855 ORTHO05D004406 8.0e-15 84.3 92 40.2
Gorai.004G002400 Gossypium raimondii HOM05D002855 ORTHO05D004406 8.0e-15 84.3 92 40.2
Lalb_Chr22g0350071 Lupinus albus HOM05D002855 ORTHO05D004406 8.0e-15 84.3 152 32.2
Peaxi162Scf00836g00219 Petunia axillaris HOM05D002855 ORTHO05D004406 8.0e-15 84.3 82 45.1
arahy.Tifrunner.gnm1.ann1.3PXT9K Arachis hypogaea HOM05D002855 ORTHO05D004406 1.0e-14 84.0 92 40.2
Mapoly0002s0042 Marchantia polymorpha HOM05D002855 ORTHO05D004406 1.0e-14 84.0 90 41.1
PSO384G0780 Papaver somniferum HOM05D002855 ORTHO05D004406 1.0e-14 84.0 90 42.2
Prupe.6G088700 Prunus persica HOM05D002855 ORTHO05D004406 1.0e-14 84.0 92 40.2
CARHR001590 Cardamine hirsuta HOM05D002855 ORTHO05D010889 1.4e-14 83.6 94 37.2
FAN25G2944 Fragaria x ananassa HOM05D002855 ORTHO05D004406 1.4e-14 83.6 92 42.4
Gohir.A05G099600 Gossypium hirsutum HOM05D002855 ORTHO05D004406 1.4e-14 83.6 92 40.2
MD03G1106200 Malus domestica HOM05D002855 ORTHO05D004406 1.4e-14 83.6 92 40.2
SalBow3G0437 Salvia bowleyana HOM05D002855 ORTHO05D004406 1.4e-14 83.6 83 42.2
Sc12g0001880 Simmondsia chinensis HOM05D002855 ORTHO05D004406 1.4e-14 83.6 83 43.4
TAR369G1034 Trochodendron aralioides HOM05D002855 ORTHO05D004406 1.4e-14 83.6 92 42.4
Ah.08g215040 Amaranthus hybridus HOM05D002855 ORTHO05D004406 1.8e-14 83.2 83 42.2
MD11G1118300 Malus domestica HOM05D002855 ORTHO05D004406 1.8e-14 83.2 92 40.2
Nn2g12814 Nelumbo nucifera HOM05D002855 ORTHO05D004406 1.8e-14 83.2 92 40.2
Ca_01364_v3 Cicer arietinum L. HOM05D002855 ORTHO05D004406 2.3e-14 82.8 128 35.9
Gohir.A08G000105 Gossypium hirsutum HOM05D002855 ORTHO05D004406 2.3e-14 82.8 92 40.2
Lalb_Chr22g0350101 Lupinus albus HOM05D002855 ORTHO05D004406 2.3e-14 82.8 152 31.6
Manes.04G028200 Manihot esculenta HOM05D002855 ORTHO05D004406 2.3e-14 82.8 124 37.9
Medtr2g096000 Medicago truncatula HOM05D002855 ORTHO05D004406 2.3e-14 82.8 92 40.2
Nitab4.5_0003784g0030 Nicotiana tabacum HOM05D002855 ORTHO05D004406 2.3e-14 82.8 124 37.9
Oeu041006.2 Olea europaea HOM05D002855 ORTHO05D004406 2.3e-14 82.8 120 36.7
Potri.009G026100 Populus trichocarpa HOM05D002855 ORTHO05D004406 2.3e-14 82.8 135 37.0
Aqoxy4G03112 Aquilegia oxysepala HOM05D002855 ORTHO05D004406 3.0e-14 82.4 92 40.2
Gorai.003G138700 Gossypium raimondii HOM05D002855 ORTHO05D004406 3.0e-14 82.4 134 33.6
Nitab4.5_0002380g0080 Nicotiana tabacum HOM05D002855 ORTHO05D004406 3.0e-14 82.4 124 37.1
RcHm_v2.0_Chr5g0062031 Rosa chinensis HOM05D002855 ORTHO05D004406 3.0e-14 82.4 92 40.2
CDE09G0123 Ceratophyllum demersum HOM05D002855 ORTHO05D004406 4.0e-14 82.0 94 39.4
Thecc.09G332800 Theobroma cacao HOM05D002855 ORTHO05D004406 4.0e-14 82.0 92 38.0
unitig_899.g14902 Utricularia gibba HOM05D002855 ORTHO05D004406 4.0e-14 82.0 94 37.2
Lj3g0004926 Lotus japonicus HOM05D002855 ORTHO05D004406 5.2e-14 81.6 128 33.6
Phvul.L002003 Phaseolus vulgaris HOM05D002855 ORTHO05D004406 5.2e-14 81.6 92 38.0
arahy.Tifrunner.gnm1.ann1.R78DWG Arachis hypogaea HOM05D002855 ORTHO05D004406 6.8e-14 81.3 83 42.2
CANSAT54G2256 Cannabis sativa HOM05D002855 ORTHO05D004406 6.8e-14 81.3 92 40.2
ECA248G3817 Erigeron canadensis HOM05D002855 ORTHO05D004406 6.8e-14 81.3 125 36.8
Eucgr.B02434 Eucalyptus grandis HOM05D002855 ORTHO05D004406 6.8e-14 81.3 125 37.6
Glyma.13G330500 Glycine max HOM05D002855 ORTHO05D004406 6.8e-14 81.3 92 39.1
Lalb_Chr14g0374891 Lupinus albus HOM05D002855 ORTHO05D004406 6.8e-14 81.3 92 39.1
DCAR_018860 Daucus carota HOM05D002855 ORTHO05D004406 8.9e-14 80.9 92 39.1
Migut.N02644 Erythranthe guttata HOM05D002855 ORTHO05D004406 8.9e-14 80.9 79 44.3
AagrBONN_evm.TU.Sc2ySwM_228.4027 Anthoceros agrestis HOM05D002855 ORTHO05D004406 1.2e-13 80.5 79 43.0
Nn2g10571 Nelumbo nucifera HOM05D002855 ORTHO05D004406 1.2e-13 80.5 92 40.2
Psat5g281800 Pisum sativum HOM05D002855 ORTHO05D004406 1.2e-13 80.5 92 39.1
DCAR_018861 Daucus carota HOM05D002855 ORTHO05D004406 2.0e-13 79.7 92 38.0
HanXRQChr14g0429221 Helianthus annuus HOM05D002855 ORTHO05D004406 2.6e-13 79.3 83 38.6
Lsat_1_v5_gn_5_166940 Lactuca sativa HOM05D002855 ORTHO05D004406 2.6e-13 79.3 83 42.2
HanXRQChr04g0110371 Helianthus annuus HOM05D002855 ORTHO05D004406 3.4e-13 79.0 125 34.4
Pp3c14_23770 Physcomitrium patens HOM05D002855 ORTHO05D010889 3.4e-13 79.0 80 43.8
Migut.D02157 Erythranthe guttata HOM05D002855 ORTHO05D004406 4.4e-13 78.6 83 42.2
TWI75G0055 Tripterygium wilfordii HOM05D002855 ORTHO05D004406 4.4e-13 78.6 83 41.0
unitig_736.g22426 Utricularia gibba HOM05D002855 ORTHO05D004406 4.4e-13 78.6 94 37.2
SGA_v2.0_scaffold194G40747 Striga asiatica HOM05D002855 ORTHO05D004406 5.7e-13 78.2 90 40.0
TWI79G0463 Tripterygium wilfordii HOM05D002855 ORTHO05D004406 5.7e-13 78.2 83 39.8
vmacro14495 Vaccinium macrocarpon HOM05D002855 ORTHO05D004406 5.7e-13 78.2 83 39.8
AUR62001859 Chenopodium quinoa HOM05D002855 ORTHO05D004406 7.5e-13 77.8 83 43.4
AUR62009654 Chenopodium quinoa HOM05D002855 ORTHO05D004406 7.5e-13 77.8 83 42.2
VMungo1080G0735 Vigna mungo HOM05D002855 ORTHO05D004406 7.5e-13 77.8 92 35.9
Dinv32829 Davidia involucrata HOM05D002855 ORTHO05D004406 9.8e-13 77.4 83 39.8
Pp3c17_22910 Physcomitrium patens HOM05D002855 ORTHO05D004406 9.8e-13 77.4 80 42.5
Rhsim01G0223400 Rhododendron simsii HOM05D002855 ORTHO05D004406 9.8e-13 77.4 83 39.8
Sabra09G0017300 Salix brachista HOM05D002855 ORTHO05D004406 9.8e-13 77.4 93 39.8
Sed0008185 Sechium edule HOM05D002855 ORTHO05D004406 9.8e-13 77.4 82 41.5
Glyma.15G043500 Glycine max HOM05D002855 ORTHO05D004406 1.3e-12 77.0 92 37.0
Potri.001G233800 Populus trichocarpa HOM05D002855 ORTHO05D004406 1.3e-12 77.0 83 42.2
Sabra16G0140100 Salix brachista HOM05D002855 ORTHO05D004406 1.3e-12 77.0 83 42.2
GSVIVG01025073001 Vitis vinifera HOM05D002855 ORTHO05D004406 1.3e-12 77.0 92 37.0
Cpa.g.sc139.9 Carica papaya HOM05D002855 ORTHO05D004406 1.7e-12 76.6 83 41.0
Atru.chr3.3777 Acer truncatum HOM05D002855 ORTHO05D004406 2.2e-12 76.3 125 33.6
CSS0021829 Camellia sinensis var. sinensis HOM05D002855 ORTHO05D004406 2.2e-12 76.3 83 38.6
CAN.G84.3 Capsicum annuum HOM05D002855 ORTHO05D004406 2.2e-12 76.3 124 37.1
TAR633G1422 Trochodendron aralioides HOM05D002855 ORTHO05D004406 2.2e-12 76.3 92 37.0
TAR623G1741 Trochodendron aralioides HOM05D002855 ORTHO05D004406 4.9e-12 75.1 82 41.5
Os05g0117864 Oryza sativa ssp. japonica HOM05D002855 ORTHO05D004406 6.3e-12 74.7 83 39.8
AL5G24520 Arabidopsis lyrata HOM05D002855 ORTHO05D004406 8.3e-12 74.3 83 43.4
Zm00001eb199580 Zea mays HOM05D002855 ORTHO05D010889 8.3e-12 74.3 78 44.9
Thhalv10002373m.g Eutrema salsugineum HOM05D002855 ORTHO05D004406 1.4e-11 73.6 93 39.8
BraA06t25210Z Brassica rapa HOM05D002855 ORTHO05D004406 1.8e-11 73.2 128 34.4
Zm00001eb355300 Zea mays HOM05D002855 ORTHO05D004406 1.8e-11 73.2 79 41.8
A06p21220 Brassica napus HOM05D002855 ORTHO05D004406 2.4e-11 72.8 128 34.4
CARHR154140 Cardamine hirsuta HOM05D002855 ORTHO05D004406 2.4e-11 72.8 83 42.2
Actinidia00806 Actinidia chinensis HOM05D002855 ORTHO05D004406 4.1e-11 72.0 83 36.1
BcaC01g01947 Brassica carinata HOM05D002855 ORTHO05D004406 4.1e-11 72.0 128 34.4
C03p70400 Brassica napus HOM05D002855 ORTHO05D004406 4.1e-11 72.0 128 34.4
BolC3t19280H Brassica oleracea HOM05D002855 ORTHO05D004406 5.4e-11 71.6 128 34.4
Carub.0005s1167 Capsella rubella HOM05D002855 ORTHO05D004406 5.4e-11 71.6 83 41.0
SHI05981 Sapria himalayana HOM05D002855 ORTHO05D004406 5.4e-11 71.6 82 39.0
THA.LOC104814856 Tarenaya hassleriana HOM05D002855 ORTHO05D004406 7.0e-11 71.2 83 39.8
HPP92_000643 Vanilla planifolia HOM05D002855 ORTHO05D004406 7.0e-11 71.2 82 40.2
AT3G45830 Arabidopsis thaliana HOM05D002855 ORTHO05D004406 9.2e-11 70.9 83 41.0
BcaB01g01053 Brassica carinata HOM05D002855 ORTHO05D004406 9.2e-11 70.9 83 39.8
Sp5g15700 Schrenkiella parvula HOM05D002855 ORTHO05D004406 1.2e-10 70.5 83 39.8
PGR102G1726 Punica granatum HOM05D002855 ORTHO05D004406 2.0e-10 69.7 83 36.1
THA.LOC104810821 Tarenaya hassleriana HOM05D002855 ORTHO05D004406 2.7e-10 69.3 89 36.0
Zm00001eb265670 Zea mays HOM05D002855 ORTHO05D004406 1.7e-09 66.6 68 45.6
CBR_g17672 Chara braunii HOM05D002855 ORTHO05D004406 2.9e-09 65.9 70 44.3
SEGI_40377 Sequoiadendron giganteum HOM05D000143 ORTHO05D000072 8.9e-06 54.3 55 43.6


User provided reference genes

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