Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 5.9e-56 220.7 118 100.0
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 6.8e-36 154.1 119 70.6
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 1.5e-35 152.9 118 71.2
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 2.6e-35 152.1 117 65.8
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.4e-35 151.8 118 69.5
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 3.4e-35 151.8 117 68.4
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 3.4e-35 151.8 118 73.7
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 5.8e-35 151.0 119 70.6
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.3e-34 149.8 105 77.1
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.7e-34 149.4 119 70.6
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 3.8e-34 148.3 109 72.5
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 3.8e-34 148.3 109 72.5
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 1.1e-33 146.7 115 71.3
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.1e-33 146.7 119 68.1
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.4e-33 146.4 120 68.3
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.4e-33 146.4 103 76.7
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.9e-33 146.0 101 75.2
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 3.2e-33 145.2 112 67.9
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 9.2e-33 143.7 113 66.4
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.7e-32 142.1 107 67.3
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 2.7e-32 142.1 112 67.0
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.5e-32 141.7 114 63.2
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 3.5e-32 141.7 118 65.3
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 7.8e-32 140.6 110 69.1
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.0e-31 140.2 112 67.0
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 2.3e-31 139.0 108 67.6
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.0e-31 138.7 114 64.9
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 3.0e-31 138.7 97 72.2
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 3.0e-31 138.7 111 69.4
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 3.9e-31 138.3 119 64.7
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 5.1e-31 137.9 117 64.1
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 6.6e-31 137.5 112 64.3
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 6.6e-31 137.5 112 64.3
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 6.6e-31 137.5 119 64.7
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 8.6e-31 137.1 111 64.9
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 1.1e-30 136.7 112 64.3
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 1.1e-30 136.7 112 64.3
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.1e-30 136.7 117 65.8
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 1.5e-30 136.3 113 63.7
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.5e-30 136.3 117 65.0
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 1.5e-30 136.3 111 64.9
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.9e-30 136.0 111 64.9
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.9e-30 136.0 111 64.9
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 1.9e-30 136.0 114 63.2
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.9e-30 136.0 119 63.0
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 2.5e-30 135.6 111 64.9
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 2.5e-30 135.6 111 64.9
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 2.5e-30 135.6 111 64.9
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.5e-30 135.6 113 65.5
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.5e-30 135.6 113 65.5
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 3.3e-30 135.2 111 64.9
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 4.3e-30 134.8 106 67.0
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 5.6e-30 134.4 112 62.5
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 5.6e-30 134.4 110 67.3
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 7.3e-30 134.0 109 65.1
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 7.3e-30 134.0 109 65.1
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 7.3e-30 134.0 117 61.5
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 7.3e-30 134.0 104 68.3
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 9.6e-30 133.7 113 63.7
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.2e-29 133.3 113 63.7
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 1.2e-29 133.3 109 65.1
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 1.2e-29 133.3 111 64.0
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.2e-29 133.3 96 70.8
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.6e-29 132.9 118 62.7
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.6e-29 132.9 111 64.0
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.6e-29 132.9 111 61.3
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 2.1e-29 132.5 113 61.9
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 3.6e-29 131.7 114 63.2
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 4.7e-29 131.3 113 61.1
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 8.1e-29 130.6 115 63.5
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.1e-28 130.2 114 63.2
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.8e-28 129.4 104 68.3
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.8e-28 129.4 97 70.1
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.8e-28 129.4 113 68.1
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.8e-28 129.4 121 58.7
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.4e-28 129.0 118 61.9
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 3.1e-28 128.6 118 61.0
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 3.1e-28 128.6 111 61.3
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 5.2e-28 127.9 99 67.7
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.2e-28 127.9 113 61.9
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 5.2e-28 127.9 112 65.2
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 6.9e-28 127.5 113 67.3
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 8.9e-28 127.1 118 60.2
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.0e-27 125.9 118 61.0
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 4.4e-27 124.8 98 70.4
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 4.4e-27 124.8 114 59.6
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 5.8e-27 124.4 112 58.9
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 9.9e-27 123.6 94 64.9
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 9.9e-27 123.6 106 62.3
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 9.9e-27 123.6 117 60.7
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 9.9e-27 123.6 118 60.2
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 1.3e-26 123.2 112 59.8
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.7e-26 122.9 121 62.0
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 1.7e-26 122.9 118 61.0
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.2e-26 122.5 113 59.3
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 2.2e-26 122.5 100 67.0
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 2.9e-26 122.1 100 65.0
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 2.9e-26 122.1 118 61.0
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 3.8e-26 121.7 87 72.4
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 3.8e-26 121.7 118 60.2
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.4e-26 120.9 91 71.4
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 8.4e-26 120.6 96 63.5
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.1e-25 120.2 113 56.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 1.9e-25 119.4 117 57.3
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 9.3e-25 117.1 90 63.3
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 3.5e-24 115.2 105 60.0
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.6e-24 114.8 91 68.1
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 1.3e-23 113.2 112 55.4
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 3.9e-23 111.7 100 60.0
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.5e-22 109.0 92 65.2
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 1.1e-20 103.6 96 59.4
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 5.3e-20 101.3 110 56.4
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.5e-19 99.8 192 39.1
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 9.9e-19 97.1 114 50.9
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 2.4e-17 92.4 98 52.0
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 4.2e-17 91.7 70 68.6
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 1.2e-16 90.1 105 48.6
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.5e-16 88.6 70 70.0
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 6.0e-16 87.8 91 53.8
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 3.0e-15 85.5 85 51.8
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 6.7e-15 84.3 66 72.7
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 3.3e-14 82.0 75 58.7
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.7e-10 69.7 86 43.0
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 3.2e-09 65.5 122 32.8
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 5.5e-09 64.7 101 35.6
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 2.5e-06 55.8 41 61.0
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 2.5e-06 55.8 41 61.0


User provided reference genes

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