Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.5e-104 382.9 197 100.0
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 2.3e-60 236.1 196 64.3
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.1e-59 233.8 196 62.8
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.9e-59 233.0 197 62.4
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 7.1e-54 214.5 171 67.3
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 9.3e-54 214.2 187 58.3
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 9.3e-54 214.2 181 64.6
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 9.3e-54 214.2 178 63.5
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 3.5e-53 212.2 197 59.4
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 4.6e-53 211.8 154 71.4
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 1.8e-52 209.9 182 62.6
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 3.0e-52 209.1 181 64.1
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 3.9e-52 208.8 179 63.7
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 2.5e-51 206.1 193 57.5
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 3.3e-51 205.7 180 61.1
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 5.6e-51 204.9 173 63.6
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.6e-50 203.4 179 60.9
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 2.8e-50 202.6 166 65.7
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 6.2e-50 201.4 172 59.9
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 1.8e-49 199.9 185 59.5
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 2.4e-49 199.5 171 63.7
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 3.1e-49 199.1 171 60.8
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 6.9e-49 198.0 189 58.7
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.5e-48 196.8 160 67.5
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 4.5e-48 195.3 181 57.5
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 7.6e-48 194.5 177 59.9
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 7.6e-48 194.5 177 59.9
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 1.3e-47 193.7 181 56.9
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 6.5e-47 191.4 172 61.6
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 8.4e-47 191.0 177 58.8
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.1e-46 190.7 177 60.5
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.4e-46 190.3 207 55.6
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 1.4e-46 190.3 168 60.1
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.9e-46 189.9 196 54.1
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 2.5e-46 189.5 160 60.0
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 4.2e-46 188.7 184 59.2
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 4.2e-46 188.7 156 62.2
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 9.3e-46 187.6 159 63.5
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 1.6e-45 186.8 164 61.6
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 2.1e-45 186.4 157 65.6
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 2.1e-45 186.4 179 59.2
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 3.5e-45 185.7 152 66.4
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.5e-45 185.7 189 56.1
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.9e-45 184.5 189 55.6
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.0e-44 184.1 160 56.9
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 1.3e-44 183.7 178 57.9
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 5.1e-44 181.8 185 56.2
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 6.7e-44 181.4 173 60.7
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 8.7e-44 181.0 160 56.9
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 8.7e-44 181.0 188 55.3
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 8.7e-44 181.0 167 58.1
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.1e-43 180.6 163 56.4
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.1e-43 180.6 186 54.8
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 1.5e-43 180.3 195 54.4
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.5e-43 179.5 180 55.6
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.3e-43 179.1 153 62.1
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 9.6e-43 177.6 192 52.6
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 1.3e-42 177.2 177 55.4
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 2.1e-42 176.4 189 52.9
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 8.2e-42 174.5 182 54.9
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 3.1e-41 172.6 176 59.1
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 2.0e-40 169.9 174 57.5
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 2.0e-40 169.9 158 56.3
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 4.5e-40 168.7 180 51.1
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 7.6e-40 167.9 173 51.4
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 2.2e-39 166.4 175 57.1
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 6.5e-39 164.9 160 57.5
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 8.4e-39 164.5 156 58.3
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.1e-38 164.1 139 62.6
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.2e-38 162.2 169 56.2
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 5.5e-38 161.8 151 59.6
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 7.1e-38 161.4 124 65.3
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 2.1e-37 159.8 174 54.0
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 2.7e-37 159.5 185 47.6
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 6.1e-37 158.3 182 53.3
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 6.1e-37 158.3 178 51.7
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 6.1e-37 158.3 188 47.9
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 6.1e-37 158.3 174 53.4
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 2.3e-36 156.4 168 51.2
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 5.1e-36 155.2 156 52.6
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 8.7e-36 154.5 135 63.0
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.1e-35 154.1 168 50.6
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 1.1e-35 154.1 158 54.4
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.9e-35 153.3 156 51.9
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 2.5e-35 152.9 172 51.2
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 2.5e-35 152.9 171 52.6
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 9.7e-35 151.0 167 50.9
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.3e-34 150.6 172 50.6
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.6e-34 150.2 186 44.1
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 2.2e-34 149.8 168 49.4
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.2e-34 149.8 151 52.3
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 2.8e-34 149.4 189 47.6
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 4.8e-34 148.7 156 50.6
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 4.8e-34 148.7 144 60.4
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 6.3e-34 148.3 156 51.3
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 6.3e-34 148.3 156 51.3
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 8.2e-34 147.9 154 51.3
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 8.2e-34 147.9 130 60.8
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 4.1e-33 145.6 161 49.1
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 9.0e-33 144.4 126 61.1
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.2e-32 144.1 142 57.7
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 6.5e-31 138.3 154 51.3
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 7.4e-27 124.8 153 51.6
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.7e-26 123.6 159 47.8
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.6e-24 116.3 117 50.4
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 3.4e-24 115.9 118 57.6
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 5.0e-23 112.1 87 64.4
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.0e-19 100.1 75 64.0
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 6.7e-12 75.1 100 49.0
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 8.8e-12 74.7 111 40.5
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 1.5e-11 73.9 127 39.4
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 2.0e-11 73.6 150 36.7


User provided reference genes

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