Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 1.5e-99 366.7 256 100.0
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 2.5e-27 126.7 243 60.9
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 3.7e-26 122.9 245 60.0
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 3.1e-25 119.8 242 59.9
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 7.6e-24 115.2 235 60.4
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.3e-23 114.4 245 57.1
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 4.9e-23 112.5 244 56.1
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 6.5e-23 112.1 245 39.2
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 1.1e-22 111.3 246 54.1
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 5.1e-20 102.4 229 56.3
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 7.4e-19 98.6 246 53.7
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.3e-18 97.8 246 53.3
Gohir.A11G108100 Gossypium hirsutum HOM05D009814 ORTHO05D004310 6.3e-18 95.5 244 52.9
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.1e-17 94.7 250 50.4
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 4.5e-16 89.4 245 48.2
Atru.chr5.960 Acer truncatum HOM05D009814 ORTHO05D004310 3.8e-15 86.3 245 55.1
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 5.0e-15 85.9 250 52.4
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 3.2e-14 83.2 245 35.1
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.2e-14 82.8 117 45.3
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 4.2e-14 82.8 235 42.6
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 1.2e-13 81.3 248 36.3
Rhsim06G0057500 Rhododendron simsii HOM05D009814 ORTHO05D004310 1.2e-13 81.3 248 49.6
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 1.6e-13 80.9 238 30.3
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 2.7e-13 80.1 239 55.2
TWI36G1520 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 7.9e-13 78.6 259 46.7
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 1.0e-12 78.2 246 42.7
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 1.4e-12 77.8 117 43.6
EL10As5g23572 Beta vulgaris HOM05D009154 ORTHO05D004310 3.9e-12 76.3 240 45.4
Cpa.g.sc18.87 Carica papaya HOM05D009814 ORTHO05D004310 8.8e-12 75.1 246 50.8
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 2.0e-11 73.9 249 46.2
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 3.3e-11 73.2 249 46.2
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 3.3e-11 73.2 242 52.9
Sed0022617 Sechium edule HOM05D009154 ORTHO05D004310 5.7e-11 72.4 236 33.5
Gorai.007G121100 Gossypium raimondii HOM05D009814 ORTHO05D004310 7.4e-11 72.0 217 51.2
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 9.7e-11 71.6 242 34.7
Eucgr.K03556 Eucalyptus grandis HOM05D009154 ORTHO05D004310 1.3e-10 71.2 228 43.9
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 2.8e-10 70.1 249 45.4
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 4.8e-10 69.3 244 53.3
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 8.2e-10 68.6 243 50.6
Sed0013714 Sechium edule HOM05D009154 ORTHO05D004310 8.2e-10 68.6 211 32.2
Hund16457 Selenicereus undatus HOM05D009154 ORTHO05D004310 8.2e-10 68.6 242 32.6
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 1.8e-09 67.4 238 32.8
TWI18G0583 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 2.4e-09 67.0 232 47.4
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 3.1e-09 66.6 250 50.0
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 3.1e-09 66.6 225 32.9
Sc17g0000300 Simmondsia chinensis HOM05D009814 ORTHO05D004310 3.1e-09 66.6 242 45.5
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 4.1e-09 66.2 241 49.4
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 4.1e-09 66.2 283 28.3
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 5.3e-09 65.9 116 40.5
Hma1.2p1_3252F.1_g334510 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 5.3e-09 65.9 77 46.8
MD09G1285700 Malus domestica HOM05D018099 ORTHO05D020712 6.9e-09 65.5 227 41.9
PGR044G0657 Punica granatum HOM05D009154 ORTHO05D004310 6.9e-09 65.5 227 35.2
CsaV3_7G030120 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.5e-08 64.3 234 39.3
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 1.5e-08 64.3 117 38.5
Cfa006724 Carpinus fangiana HOM05D013055 ORTHO05D014149 3.4e-08 63.2 117 37.6
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 3.4e-08 63.2 70 50.0
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 5.9e-08 62.4 242 51.7
RcHm_v2.0_Chr3g0487151 Rosa chinensis HOM05D018099 ORTHO05D020712 7.7e-08 62.0 238 39.5
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 1.0e-07 61.6 249 27.3
Potri.002G192700 Populus trichocarpa HOM05D009814 ORTHO05D004310 1.3e-07 61.2 117 39.3
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 1.3e-07 61.2 244 42.6
Peaxi162Scf00228g00615 Petunia axillaris HOM05D012194 ORTHO05D015569 2.2e-07 60.5 246 40.2
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 3.8e-07 59.7 245 37.1
Sopen05g031870 Solanum pennellii HOM05D012194 ORTHO05D015569 6.5e-07 58.9 251 46.2
ClCG09G004940 Citrullus lanatus HOM05D009154 ORTHO05D004310 1.1e-06 58.2 239 28.5
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 1.1e-06 58.2 241 46.1
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.1e-06 58.2 241 41.5
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 2.5e-06 57.0 71 49.3
CiPaw.07G030700 Carya illinoinensis HOM05D013055 ORTHO05D014149 3.2e-06 56.6 117 36.8
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 3.2e-06 56.6 66 43.9
AUR62024610 Chenopodium quinoa HOM05D009154 ORTHO05D004310 4.2e-06 56.2 247 33.2
Lalb_Chr02g0146911 Lupinus albus HOM05D012173 ORTHO05D004310 4.2e-06 56.2 234 34.2
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 4.2e-06 56.2 239 31.0
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 4.2e-06 56.2 241 46.1
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 5.5e-06 55.8 243 45.7
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 5.5e-06 55.8 70 50.0
Haze_04036 Corylus avellana HOM05D013055 ORTHO05D014149 7.2e-06 55.5 117 35.0
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 9.4e-06 55.1 245 46.9
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 9.4e-06 55.1 70 47.1
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 9.4e-06 55.1 71 47.9


User provided reference genes

Program Settings