Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028020001 Vitis vinifera HOM05D000639 ORTHO05D004019 3.4e-43 177.9 92 100.0
GSVIVG01017761001 Vitis vinifera HOM05D000639 ORTHO05D004019 1.2e-16 89.7 57 80.7
VMungo1215G1558 Vigna mungo HOM05D000639 ORTHO05D004019 9.8e-14 80.1 57 68.4
Phvul.003G105500 Phaseolus vulgaris HOM05D000639 ORTHO05D004019 2.2e-13 79.0 57 66.7
TAR362G0702 Trochodendron aralioides HOM05D000639 ORTHO05D004019 2.2e-13 79.0 57 68.4
CANSAT78G0502 Cannabis sativa HOM05D000639 ORTHO05D004019 2.8e-13 78.6 57 66.7
Atru.chr4.2839 Acer truncatum HOM05D000639 ORTHO05D004019 3.7e-13 78.2 57 68.4
MSTRG.3915 Avicennia marina HOM05D000639 ORTHO05D004019 6.3e-13 77.4 59 62.7
Lalb_Chr15g0083501 Lupinus albus HOM05D000639 ORTHO05D004019 6.3e-13 77.4 57 66.7
TAR365G0782 Trochodendron aralioides HOM05D000639 ORTHO05D004019 6.3e-13 77.4 59 66.1
Aqoxy2G02982 Aquilegia oxysepala HOM05D000639 ORTHO05D004019 8.3e-13 77.0 57 63.2
CiPaw.02G082800 Carya illinoinensis HOM05D000639 ORTHO05D004019 8.3e-13 77.0 57 68.4
Ciclev10004703m.g Citrus clementina HOM05D000639 ORTHO05D004019 8.3e-13 77.0 57 66.7
FvH4_4g18050 Fragaria vesca HOM05D000639 ORTHO05D004019 8.3e-13 77.0 57 63.2
FAN07G2352 Fragaria x ananassa HOM05D000639 ORTHO05D005322 8.3e-13 77.0 57 63.2
FAN12G0276 Fragaria x ananassa HOM05D000639 ORTHO05D004019 8.3e-13 77.0 57 63.2
FAN12G1449 Fragaria x ananassa HOM05D000639 ORTHO05D004019 8.3e-13 77.0 57 63.2
FAN17G3001 Fragaria x ananassa HOM05D000639 ORTHO05D004019 8.3e-13 77.0 57 63.2
Lj6g0003576 Lotus japonicus HOM05D000639 ORTHO05D004019 8.3e-13 77.0 69 56.5
Oeu027725.1 Olea europaea HOM05D000639 ORTHO05D004019 8.3e-13 77.0 45 80.0
Potri.008G222700 Populus trichocarpa HOM05D000639 ORTHO05D004019 8.3e-13 77.0 57 64.9
Glyma.07G247300 Glycine max HOM05D000639 ORTHO05D004019 1.1e-12 76.6 57 64.9
Glyma.17G026500 Glycine max HOM05D000639 ORTHO05D004019 1.1e-12 76.6 57 64.9
Cc03_g01920 Coffea canephora HOM05D000639 ORTHO05D004019 1.4e-12 76.3 57 64.9
Oeu029702.2 Olea europaea HOM05D000639 ORTHO05D004019 1.4e-12 76.3 57 63.2
ATR0796G199 Amborella trichopoda HOM05D000639 ORTHO05D004019 1.8e-12 75.9 57 64.9
Lj4g0016454 Lotus japonicus HOM05D000639 ORTHO05D004019 1.8e-12 75.9 57 64.9
Migut.G00162 Erythranthe guttata HOM05D000639 ORTHO05D004019 2.4e-12 75.5 57 63.2
RcHm_v2.0_Chr4g0422261 Rosa chinensis HOM05D000639 ORTHO05D004019 2.4e-12 75.5 57 61.4
Ca_01937_v3 Cicer arietinum L. HOM05D000639 ORTHO05D004019 3.1e-12 75.1 57 63.2
Hma1.2p1_2670F.1_g326610 Hydrangea macrophylla HOM05D000639 ORTHO05D004019 3.1e-12 75.1 57 63.2
Rhsim02G0009000 Rhododendron simsii HOM05D000639 ORTHO05D004019 3.1e-12 75.1 44 77.3
arahy.Tifrunner.gnm1.ann1.KA48HN Arachis hypogaea HOM05D000639 ORTHO05D004019 4.1e-12 74.7 57 66.7
arahy.Tifrunner.gnm1.ann1.LR2V9P Arachis hypogaea HOM05D000639 ORTHO05D004019 4.1e-12 74.7 57 66.7
MD16G1168900 Malus domestica HOM05D000639 ORTHO05D004019 4.1e-12 74.7 57 63.2
Manes.03G195300 Manihot esculenta HOM05D000639 ORTHO05D004019 4.1e-12 74.7 57 63.2
Prupe.1G136600 Prunus persica HOM05D000639 ORTHO05D004019 4.1e-12 74.7 57 61.4
Sed0022843 Sechium edule HOM05D000639 ORTHO05D004019 4.1e-12 74.7 57 63.2
CiPaw.01G148600 Carya illinoinensis HOM05D000639 ORTHO05D004019 5.4e-12 74.3 57 66.7
Nn3g21443 Nelumbo nucifera HOM05D000639 ORTHO05D004019 5.4e-12 74.3 57 63.2
TPR.G13846 Trifolium pratense HOM05D000639 ORTHO05D004019 5.4e-12 74.3 57 61.4
MSTRG.10095 Avicennia marina HOM05D000639 ORTHO05D004019 7.0e-12 73.9 57 63.2
CAN.G449.33 Capsicum annuum HOM05D000639 ORTHO05D004019 7.0e-12 73.9 57 64.9
Cpa.g.sc16.172 Carica papaya HOM05D000639 ORTHO05D004019 7.0e-12 73.9 57 63.2
COL.COLO4_13868 Corchorus olitorius HOM05D000639 ORTHO05D004019 7.0e-12 73.9 57 61.4
Dinv44380 Davidia involucrata HOM05D000639 ORTHO05D004019 7.0e-12 73.9 57 63.2
Hma1.2p1_0078F.1_g040530 Hydrangea macrophylla HOM05D000639 ORTHO05D004019 7.0e-12 73.9 69 53.6
Medtr4g119900 Medicago truncatula HOM05D000639 ORTHO05D004019 7.0e-12 73.9 57 61.4
Peaxi162Scf00086g00431 Petunia axillaris HOM05D000639 ORTHO05D004019 7.0e-12 73.9 57 63.2
ClCG06G005130 Citrullus lanatus HOM05D000639 ORTHO05D004019 9.2e-12 73.6 57 61.4
Haze_01200 Corylus avellana HOM05D000639 ORTHO05D004019 9.2e-12 73.6 57 64.9
Potri.010G014600 Populus trichocarpa HOM05D000639 ORTHO05D004019 9.2e-12 73.6 57 63.2
Hund24894 Selenicereus undatus HOM05D000639 ORTHO05D004019 9.2e-12 73.6 57 61.4
Sc19g0005320 Simmondsia chinensis HOM05D000639 ORTHO05D004019 9.2e-12 73.6 57 61.4
CSS0034707 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D004019 1.2e-11 73.2 57 61.4
MELO3C021330.2 Cucumis melo HOM05D000639 ORTHO05D004019 1.2e-11 73.2 57 61.4
Duzib151G0063 Durio zibethinus HOM05D000639 ORTHO05D004019 1.2e-11 73.2 57 61.4
Eucgr.B01318 Eucalyptus grandis HOM05D000639 ORTHO05D004019 1.2e-11 73.2 69 52.2
Lalb_Chr13g0303571 Lupinus albus HOM05D000639 ORTHO05D004019 1.2e-11 73.2 57 63.2
Medtr2g436780 Medicago truncatula HOM05D000639 ORTHO05D004019 1.2e-11 73.2 69 53.6
Nn4g25839 Nelumbo nucifera HOM05D000639 ORTHO05D004019 1.2e-11 73.2 57 63.2
vmacro15235 Vaccinium macrocarpon HOM05D000639 ORTHO05D004019 1.2e-11 73.2 44 75.0
Ca_21493_v3 Cicer arietinum L. HOM05D000639 ORTHO05D004019 1.6e-11 72.8 57 59.6
CsaV3_6G017170 Cucumis sativus L. HOM05D000639 ORTHO05D004019 1.6e-11 72.8 57 59.6
HanXRQChr13g0411281 Helianthus annuus HOM05D000639 ORTHO05D004019 1.6e-11 72.8 57 63.2
Lj6C675G15 Lonicera japonica HOM05D000639 ORTHO05D004019 1.6e-11 72.8 57 63.2
Lj6C676T4 Lonicera japonica HOM05D000639 ORTHO05D004019 1.6e-11 72.8 57 63.2
MD13G1168500 Malus domestica HOM05D000639 ORTHO05D004019 1.6e-11 72.8 57 61.4
PGSC0003DMG400008452 Solanum tuberosum HOM05D000639 ORTHO05D004019 1.6e-11 72.8 57 64.9
TPR.G3204 Trifolium pratense HOM05D000639 ORTHO05D004019 1.6e-11 72.8 57 59.6
Ah.04g164890 Amaranthus hybridus HOM05D000639 ORTHO05D004019 2.0e-11 72.4 57 61.4
Lsat_1_v5_gn_5_53081 Lactuca sativa HOM05D000639 ORTHO05D004019 2.0e-11 72.4 57 59.6
Lalb_Chr12g0196591 Lupinus albus HOM05D000639 ORTHO05D004019 2.0e-11 72.4 57 63.2
Nitab4.5_0000570g0130 Nicotiana tabacum HOM05D000639 ORTHO05D004019 2.0e-11 72.4 57 61.4
PSO302G0100 Papaver somniferum HOM05D000639 ORTHO05D004019 2.0e-11 72.4 45 73.3
Peaxi162Scf00576g00011 Petunia axillaris HOM05D000639 ORTHO05D004019 2.0e-11 72.4 57 63.2
Phvul.009G248200 Phaseolus vulgaris HOM05D000639 ORTHO05D004019 2.0e-11 72.4 57 63.2
TWI09G1119 Tripterygium wilfordii HOM05D000639 ORTHO05D004019 2.0e-11 72.4 57 57.9
TWI73G0330 Tripterygium wilfordii HOM05D000639 ORTHO05D004019 2.0e-11 72.4 57 57.9
unitig_748.g8732 Utricularia gibba HOM05D000639 ORTHO05D004019 2.0e-11 72.4 57 61.4
vmacro08153 Vaccinium macrocarpon HOM05D000639 ORTHO05D004019 2.0e-11 72.4 57 61.4
Cfa015385 Carpinus fangiana HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 63.2
AUR62008114 Chenopodium quinoa HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 61.4
AUR62028692 Chenopodium quinoa HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 61.4
DCAR_027075 Daucus carota HOM05D000639 ORTHO05D004019 2.7e-11 72.0 74 51.4
Duzib052G0726 Durio zibethinus HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 61.4
Duzib212G0808 Durio zibethinus HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 61.4
HanXRQChr03g0080961 Helianthus annuus HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 59.6
Nitab4.5_0003466g0120 Nicotiana tabacum HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 59.6
Psat4g027520 Pisum sativum HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 56.1
SalBow2G1467 Salvia bowleyana HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 59.6
Solyc05g054240.3 Solanum lycopersicum HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 64.9
Sopen05g032730 Solanum pennellii HOM05D000639 ORTHO05D004019 2.7e-11 72.0 57 64.9
Gohir.A09G239000 Gossypium hirsutum HOM05D000639 ORTHO05D004019 3.5e-11 71.6 57 59.6
Zm00001eb330380 Zea mays HOM05D000639 ORTHO05D004019 3.5e-11 71.6 57 57.9
Actinidia17338 Actinidia chinensis HOM05D000639 ORTHO05D004019 4.5e-11 71.2 57 59.6
CSS0043025 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D004019 4.5e-11 71.2 57 61.4
Gohir.D09G239900 Gossypium hirsutum HOM05D000639 ORTHO05D004019 4.5e-11 71.2 57 59.6
Gorai.006G262700 Gossypium raimondii HOM05D000639 ORTHO05D004019 4.5e-11 71.2 57 59.6
Lj3A817G85 Lonicera japonica HOM05D000639 ORTHO05D004019 4.5e-11 71.2 57 59.6
Lj3C819G5 Lonicera japonica HOM05D000639 ORTHO05D004019 4.5e-11 71.2 57 59.6
Nitab4.5_0001233g0100 Nicotiana tabacum HOM05D000639 ORTHO05D004019 4.5e-11 71.2 57 61.4
Nitab4.5_0001904g0120 Nicotiana tabacum HOM05D000639 ORTHO05D004019 4.5e-11 71.2 57 61.4
A06p38610 Brassica napus HOM05D000639 ORTHO05D004019 5.9e-11 70.9 57 59.6
C07p39650 Brassica napus HOM05D000639 ORTHO05D004019 5.9e-11 70.9 57 59.6
BolC7t44488H Brassica oleracea HOM05D000639 ORTHO05D004019 5.9e-11 70.9 57 59.6
Gohir.A10G164200 Gossypium hirsutum HOM05D000639 ORTHO05D004019 5.9e-11 70.9 57 59.6
Gohir.D10G170500 Gossypium hirsutum HOM05D000639 ORTHO05D004019 5.9e-11 70.9 57 59.6
Gorai.011G190400 Gossypium raimondii HOM05D000639 ORTHO05D004019 5.9e-11 70.9 57 59.6
MBI19_g29220_MAGBIO Magnolia biondii HOM05D000639 ORTHO05D004019 5.9e-11 70.9 57 61.4
PSO210G5853 Papaver somniferum HOM05D000639 ORTHO05D004019 5.9e-11 70.9 57 59.6
PGR031G2129 Punica granatum HOM05D000639 ORTHO05D004019 5.9e-11 70.9 57 59.6
Actinidia14303 Actinidia chinensis HOM05D000639 ORTHO05D004019 7.8e-11 70.5 57 59.6
C05p60460 Brassica napus HOM05D000639 ORTHO05D004019 7.8e-11 70.5 57 61.4
Glyma.09G044700 Glycine max HOM05D000639 ORTHO05D004019 7.8e-11 70.5 57 59.6
Thecc.04G284900 Theobroma cacao HOM05D000639 ORTHO05D004019 7.8e-11 70.5 57 57.9
VMungo1309G0809 Vigna mungo HOM05D000639 ORTHO05D004019 7.8e-11 70.5 57 59.6
BcaC05g29823 Brassica carinata HOM05D000639 ORTHO05D004019 1.0e-10 70.1 57 61.4
A05p41240 Brassica napus HOM05D000639 ORTHO05D004019 1.0e-10 70.1 57 61.4
BolC5t34700H Brassica oleracea HOM05D000639 ORTHO05D004019 1.0e-10 70.1 57 61.4
BraA05t22847Z Brassica rapa HOM05D000639 ORTHO05D004019 1.0e-10 70.1 57 61.4
Carub.0008s0884 Capsella rubella HOM05D000639 ORTHO05D004019 1.0e-10 70.1 57 59.6
ECA240G4511 Erigeron canadensis HOM05D000639 ORTHO05D004019 1.0e-10 70.1 57 56.1
Solyc12g099560.2 Solanum lycopersicum HOM05D000639 ORTHO05D004019 1.0e-10 70.1 57 56.1
Sopen12g034240 Solanum pennellii HOM05D000639 ORTHO05D004019 1.0e-10 70.1 57 56.1
PGSC0003DMG400004710 Solanum tuberosum HOM05D000639 ORTHO05D004019 1.0e-10 70.1 57 56.1
Os07g0671700 Oryza sativa ssp. japonica HOM05D000639 ORTHO05D004019 1.3e-10 69.7 57 57.9
CARHR081540 Cardamine hirsuta HOM05D000639 ORTHO05D004019 1.7e-10 69.3 57 59.6
CARHR286220 Cardamine hirsuta HOM05D000639 ORTHO05D004019 1.7e-10 69.3 57 57.9
Glyma.15G148200 Glycine max HOM05D000639 ORTHO05D004019 1.7e-10 69.3 57 57.9
THA.LOC104818926 Tarenaya hassleriana HOM05D000639 ORTHO05D004019 1.7e-10 69.3 69 52.2
Actinidia01464 Actinidia chinensis HOM05D000639 ORTHO05D004019 2.3e-10 68.9 57 57.9
Actinidia40256 Actinidia chinensis HOM05D000639 ORTHO05D004019 2.3e-10 68.9 57 57.9
CAN.G484.33 Capsicum annuum HOM05D000639 ORTHO05D004019 2.3e-10 68.9 57 56.1
Lsat_1_v5_gn_8_114700 Lactuca sativa HOM05D000957 ORTHO05D000754 2.3e-10 68.9 57 57.9
Lsat_1_v5_gn_9_85880 Lactuca sativa HOM05D000639 ORTHO05D004019 2.3e-10 68.9 58 58.6
Zm00001eb111180 Zea mays HOM05D000639 ORTHO05D004019 2.3e-10 68.9 57 56.1
AL8G22390 Arabidopsis lyrata HOM05D000639 ORTHO05D004019 2.9e-10 68.6 57 59.6
THA.LOC104802688 Tarenaya hassleriana HOM05D000639 ORTHO05D004019 2.9e-10 68.6 57 59.6
Thhalv10020486m.g Eutrema salsugineum HOM05D000639 ORTHO05D004019 3.8e-10 68.2 57 57.9
BcaC05g29770 Brassica carinata HOM05D000639 ORTHO05D004019 5.0e-10 67.8 69 49.3
BcaB07g34211 Brassica carinata HOM05D000639 ORTHO05D004019 6.6e-10 67.4 57 56.1
BcaC03g17691 Brassica carinata HOM05D000639 ORTHO05D004019 6.6e-10 67.4 57 56.1
A02p37840 Brassica napus HOM05D000639 ORTHO05D004019 6.6e-10 67.4 57 56.1
C02p57000 Brassica napus HOM05D000639 ORTHO05D004019 6.6e-10 67.4 57 56.1
BolC2t11770H Brassica oleracea HOM05D000639 ORTHO05D004019 6.6e-10 67.4 57 56.1
BraA02t08766Z Brassica rapa HOM05D000639 ORTHO05D004019 6.6e-10 67.4 57 56.1
CDE02G3502 Ceratophyllum demersum HOM05D000639 ORTHO05D004019 6.6e-10 67.4 57 61.4
Thhalv10003986m.g Eutrema salsugineum HOM05D000639 ORTHO05D004019 6.6e-10 67.4 57 56.1
BcaC01g00537 Brassica carinata HOM05D000639 ORTHO05D004019 8.6e-10 67.0 57 56.1
Gohir.A09G062500 Gossypium hirsutum HOM05D000639 ORTHO05D004019 8.6e-10 67.0 57 56.1
Sp2g19400 Schrenkiella parvula HOM05D000639 ORTHO05D004019 8.6e-10 67.0 57 56.1
AT5G49020 Arabidopsis thaliana HOM05D000639 ORTHO05D004019 1.1e-09 66.6 57 57.9
Gohir.D09G061400 Gossypium hirsutum HOM05D000639 ORTHO05D004019 1.1e-09 66.6 45 66.7
Gorai.006G076000 Gossypium raimondii HOM05D000639 ORTHO05D004019 1.1e-09 66.6 57 56.1
CDE08G1566 Ceratophyllum demersum HOM05D000639 ORTHO05D004019 1.5e-09 66.2 57 59.6
QL06p008928 Quercus lobata HOM05D000639 ORTHO05D004019 1.5e-09 66.2 57 57.9
BolC3t16423H Brassica oleracea HOM05D000639 ORTHO05D004019 1.9e-09 65.9 39 74.4
Carub.0003s0645 Capsella rubella HOM05D000639 ORTHO05D004019 1.9e-09 65.9 57 56.1
CBR_g3614 Chara braunii HOM05D000639 ORTHO05D004019 2.5e-09 65.5 57 54.4
Pp3c1_7870 Physcomitrium patens HOM05D000639 ORTHO05D004019 5.6e-09 64.3 57 57.9
AagrBONN_evm.TU.Sc2ySwM_228.3515 Anthoceros agrestis HOM05D000639 ORTHO05D004019 7.3e-09 63.9 59 54.2
HPP92_000402 Vanilla planifolia HOM05D000639 ORTHO05D004019 7.3e-09 63.9 57 56.1
AL3G18100 Arabidopsis lyrata HOM05D000639 ORTHO05D004019 1.2e-08 63.2 57 54.4
AT3G06930 Arabidopsis thaliana HOM05D000639 ORTHO05D004019 1.2e-08 63.2 57 54.4
Sp3g05880 Schrenkiella parvula HOM05D000639 ORTHO05D004019 1.2e-08 63.2 57 54.4
Lsat_1_v5_gn_5_64200 Lactuca sativa HOM05D000639 ORTHO05D004019 1.6e-08 62.8 62 50.0
Aa31LG5G17500 Aethionema arabicum HOM05D000639 ORTHO05D004019 2.1e-08 62.4 57 54.4
Pp3c11_14160 Physcomitrium patens HOM05D000639 ORTHO05D004019 1.0e-07 60.1 57 50.9
SMO118G0363 Selaginella moellendorffii HOM05D000639 ORTHO05D004019 1.0e-07 60.1 57 50.9
Sc13g0003460 Simmondsia chinensis HOM05D000639 ORTHO05D004019 2.3e-07 58.9 54 55.6
CSS0036548 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D004019 1.5e-06 56.2 59 52.5
Rhsim04G0222300 Rhododendron simsii HOM05D000639 ORTHO05D004019 3.4e-06 55.1 88 38.6


User provided reference genes

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