Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 8.8e-51 203.4 106 100.0
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.5e-37 159.5 102 78.4
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 5.6e-37 157.5 101 79.2
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 7.3e-37 157.1 101 78.2
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 7.3e-37 157.1 102 76.5
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 3.6e-36 154.8 103 75.7
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 6.1e-36 154.1 103 73.8
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 6.1e-36 154.1 101 77.2
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 8.0e-36 153.7 103 76.7
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 1.0e-35 153.3 101 76.2
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.4e-35 152.9 101 76.2
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 1.4e-35 152.9 101 76.2
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 2.3e-35 152.1 101 77.2
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 4.0e-35 151.4 100 78.0
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 4.0e-35 151.4 97 80.4
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.0e-35 151.4 97 80.4
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 5.2e-35 151.0 101 76.2
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 5.2e-35 151.0 97 80.4
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 6.8e-35 150.6 105 72.4
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 6.8e-35 150.6 99 74.7
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 6.8e-35 150.6 103 72.8
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 6.8e-35 150.6 96 81.2
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.2e-34 149.8 103 71.8
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.2e-34 149.8 97 79.4
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 1.5e-34 149.4 100 77.0
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.5e-34 149.4 104 73.1
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 5.7e-34 147.5 100 72.0
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 5.7e-34 147.5 100 74.0
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 5.7e-34 147.5 101 73.3
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 5.7e-34 147.5 99 72.7
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 5.7e-34 147.5 100 77.0
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 5.7e-34 147.5 103 71.8
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 7.5e-34 147.1 99 72.7
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 7.5e-34 147.1 103 69.9
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 7.5e-34 147.1 103 70.9
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 9.8e-34 146.7 100 77.0
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.7e-33 146.0 101 73.3
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.7e-33 146.0 103 69.9
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 1.7e-33 146.0 105 72.4
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 1.7e-33 146.0 100 75.0
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 2.2e-33 145.6 100 75.0
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 2.2e-33 145.6 99 74.7
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 3.7e-33 144.8 101 72.3
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 3.7e-33 144.8 99 72.7
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 3.7e-33 144.8 101 74.3
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 4.9e-33 144.4 100 74.0
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 4.9e-33 144.4 100 72.0
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 6.4e-33 144.1 103 68.9
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 8.3e-33 143.7 100 73.0
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 1.4e-32 142.9 106 67.0
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 2.4e-32 142.1 103 68.9
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 2.4e-32 142.1 100 71.0
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 5.4e-32 141.0 99 73.7
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 9.2e-32 140.2 99 73.7
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 9.2e-32 140.2 99 72.7
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 1.2e-31 139.8 103 68.9
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.2e-31 139.8 98 73.5
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.2e-31 139.8 98 73.5
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.2e-31 139.8 98 73.5
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.2e-31 139.8 98 73.5
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 1.6e-31 139.4 100 72.0
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 1.6e-31 139.4 99 71.7
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 2.0e-31 139.0 99 72.7
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 2.0e-31 139.0 102 69.6
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 3.5e-31 138.3 103 67.0
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 4.6e-31 137.9 102 70.6
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 5.9e-31 137.5 99 67.7
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 5.9e-31 137.5 102 69.6
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 5.9e-31 137.5 102 68.6
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 1.0e-30 136.7 99 70.7
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 1.3e-30 136.3 100 70.0
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 1.7e-30 136.0 98 71.4
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 3.9e-30 134.8 97 72.2
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 3.9e-30 134.8 102 65.7
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 3.9e-30 134.8 102 66.7
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 5.0e-30 134.4 102 65.7
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 5.0e-30 134.4 102 65.7
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 1.5e-29 132.9 105 63.8
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 1.9e-29 132.5 100 71.0
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.9e-29 132.5 94 71.3
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 2.5e-29 132.1 101 64.4
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 4.3e-29 131.3 100 67.0
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 4.3e-29 131.3 99 66.7
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 5.6e-29 131.0 98 69.4
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 5.6e-29 131.0 103 67.0
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 2.1e-28 129.0 100 64.0
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 2.8e-28 128.6 100 64.0
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 3.6e-28 128.3 100 69.0
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 3.6e-28 128.3 103 63.1
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 3.6e-28 128.3 102 63.7
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 4.7e-28 127.9 97 66.0
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 4.7e-28 127.9 100 64.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 4.7e-28 127.9 100 64.0
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 6.2e-28 127.5 100 64.0
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 1.8e-27 125.9 117 59.8
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.8e-27 125.9 100 63.0
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 7.5e-26 120.6 77 81.8
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 6.4e-25 117.5 79 75.9
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 8.3e-25 117.1 97 59.8
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 1.1e-24 116.7 97 60.8
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 1.4e-24 116.3 79 75.9
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 9.2e-24 113.6 81 72.8
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.2e-23 113.2 84 69.0
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.0e-23 112.5 82 70.7
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.7e-23 112.1 81 74.1
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 2.7e-23 112.1 103 58.3
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.5e-23 111.7 84 67.9
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 1.0e-22 110.2 154 46.1
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 5.0e-22 107.8 76 71.1
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 1.9e-21 105.9 98 56.1
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 1.9e-21 105.9 103 51.5
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 2.5e-21 105.5 98 57.1
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 7.3e-21 104.0 177 38.4
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 3.6e-20 101.7 74 67.6
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 2.3e-19 99.0 76 65.8
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 5.2e-19 97.8 90 58.9
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.5e-18 96.3 79 65.8
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 2.0e-18 95.9 74 67.6
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 3.4e-18 95.1 103 52.4
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 1.3e-17 93.2 91 52.7
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 3.2e-16 88.6 91 51.6
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 8.1e-12 73.9 52 67.3
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 8.1e-12 73.9 52 67.3
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.4e-11 73.2 54 70.4
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 1.1e-08 63.5 81 40.7
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 2.4e-08 62.4 86 38.4
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 2.7e-07 58.9 98 35.7
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 6.6e-06 54.3 50 48.0


User provided reference genes

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