Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 1.9e-130 469.2 234 100.0
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 4.1e-101 371.7 226 78.3
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.6e-100 369.8 230 76.5
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 2.7e-100 369.0 232 74.6
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 4.6e-100 368.2 227 78.4
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 1.3e-99 366.7 234 76.5
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.0e-99 365.5 215 80.0
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 8.6e-99 364.0 224 78.6
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 3.3e-98 362.1 217 79.3
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 4.3e-98 361.7 225 76.9
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 5.6e-98 361.3 230 74.3
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 7.3e-98 360.9 231 75.3
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 7.3e-98 360.9 231 75.8
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 9.5e-98 360.5 231 75.8
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 2.8e-97 359.0 224 75.9
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.8e-97 359.0 231 75.3
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 3.6e-97 358.6 224 75.9
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.1e-96 357.1 231 74.0
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.1e-96 357.1 231 73.2
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.8e-96 356.3 230 71.7
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 2.3e-96 355.9 217 77.0
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 3.1e-96 355.5 232 73.7
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 3.1e-96 355.5 217 77.4
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 4.0e-96 355.1 234 71.4
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 5.2e-96 354.8 231 71.4
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 6.8e-96 354.4 221 75.6
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 6.8e-96 354.4 229 73.4
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 6.8e-96 354.4 231 72.7
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 8.9e-96 354.0 233 73.0
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 8.9e-96 354.0 228 74.6
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.2e-95 353.6 232 73.3
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.2e-95 353.6 233 73.0
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.5e-95 353.2 217 77.0
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 2.0e-95 352.8 232 71.6
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 2.0e-95 352.8 225 72.0
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 2.0e-95 352.8 225 72.0
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 2.0e-95 352.8 217 77.4
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.4e-95 352.1 217 76.5
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 3.4e-95 352.1 233 72.5
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 4.4e-95 351.7 231 72.3
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 5.8e-95 351.3 215 76.7
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 5.8e-95 351.3 229 72.1
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.3e-94 350.1 225 72.4
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.7e-94 349.7 231 70.6
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.7e-94 349.7 229 72.1
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 1.7e-94 349.7 218 74.8
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 2.9e-94 349.0 233 71.7
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 2.9e-94 349.0 231 71.4
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 2.9e-94 349.0 228 72.4
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 2.9e-94 349.0 226 70.8
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 3.8e-94 348.6 217 74.2
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 3.8e-94 348.6 232 70.7
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.8e-94 348.6 217 75.6
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 4.9e-94 348.2 231 70.6
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 4.9e-94 348.2 225 70.7
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 6.4e-94 347.8 224 71.4
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 6.4e-94 347.8 235 71.1
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 1.9e-93 346.3 225 71.6
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 1.9e-93 346.3 232 69.8
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 2.4e-93 345.9 231 70.1
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 4.1e-93 345.1 226 69.9
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 5.4e-93 344.7 232 71.1
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 5.4e-93 344.7 228 71.5
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 5.4e-93 344.7 226 69.9
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 7.1e-93 344.4 225 70.7
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.2e-92 343.6 226 71.7
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.6e-92 343.2 233 68.2
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 1.6e-92 343.2 233 68.2
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 1.6e-92 343.2 226 69.0
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 2.1e-92 342.8 217 74.7
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 2.7e-92 342.4 225 69.3
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 3.5e-92 342.0 225 71.6
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 4.6e-92 341.7 230 68.3
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 6.0e-92 341.3 217 73.7
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.0e-91 340.5 224 72.3
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.3e-91 340.1 234 70.5
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.3e-91 340.1 220 71.4
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 1.7e-91 339.7 226 69.5
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 3.9e-91 338.6 220 73.2
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 5.1e-91 338.2 231 71.9
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 6.6e-91 337.8 234 67.1
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 8.6e-91 337.4 224 71.0
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 1.9e-90 336.3 225 70.2
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 4.3e-90 335.1 234 67.9
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 5.6e-90 334.7 256 66.4
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 5.6e-90 334.7 214 73.4
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 9.6e-90 334.0 245 68.6
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 9.6e-90 334.0 235 68.1
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 2.4e-88 329.3 217 72.4
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 3.1e-88 328.9 214 71.5
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 3.4e-87 325.5 217 70.5
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 4.4e-87 325.1 227 69.2
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 9.9e-87 323.9 201 75.1
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 1.9e-85 319.7 195 73.8
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 1.6e-84 316.6 228 64.9
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 2.3e-83 312.8 324 51.5
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.3e-81 307.0 268 59.0
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 8.1e-81 304.3 201 72.1
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 3.8e-78 295.4 206 70.4
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.2e-76 290.4 174 78.7
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 3.9e-75 285.4 163 81.0
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 1.6e-73 280.0 169 77.5
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 4.5e-71 271.9 221 60.2
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 6.0e-68 261.5 234 56.0
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 6.5e-62 241.5 215 54.9
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.6e-60 235.3 217 52.1
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 7.9e-52 208.0 167 62.3
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 7.9e-52 208.0 141 69.5
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.9e-45 186.8 125 71.2
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 7.9e-44 181.4 216 47.2
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.4e-43 180.6 101 82.2
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 3.4e-39 166.0 211 45.5
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 7.9e-36 154.8 97 73.2
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.8e-35 153.7 100 76.0
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.8e-35 153.7 100 76.0
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 9.7e-34 147.9 212 40.6
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.7e-33 147.1 96 71.9
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 6.3e-33 145.2 83 79.5
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 7.7e-31 138.3 210 39.5
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 8.5e-30 134.8 115 60.0
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.7e-27 125.2 79 75.9
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 4.4e-26 122.5 121 53.7
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 4.4e-26 122.5 121 53.7
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.8e-24 117.1 117 55.6
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.6e-23 114.0 101 56.4
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.2e-20 104.4 83 63.9
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.6e-20 104.0 62 74.2
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 2.4e-16 90.1 208 31.7
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.0e-14 84.7 194 32.5
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.9e-13 80.5 190 30.0
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.5e-13 80.1 55 67.3
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 9.5e-13 78.2 48 70.8
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 1.4e-11 74.3 55 67.3


User provided reference genes

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